Leguminivora glycinivorella (soybean pod borer): 125231473
Help
Entry
125231473 CDS
T09956
Name
(RefSeq) LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 5-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
125231473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgly03400
]
125231473
DNA repair and recombination proteins [BR:
lgly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
125231473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
125231473
NCBI-ProteinID:
XP_047992909
LinkDB
All DBs
Position
11:5272433..5275549
Genome browser
AA seq
716 aa
AA seq
DB search
MAPKVDQGTIIILDVGRNVSLPEDNKKLAPAEENKNFFLKAKECAARIIERKIMTQANNF
VGVTLLGSKKTNNTMAEEVEGAFRHIDVLYQLQTPTWQMIRDLPKEPTKSRGDWFDALIV
AADQFKKEMERAKIVNKKIILMTNFQSPAKINDDQIEMVVNGFKEENFEVDVIGLDLTDE
NHKGDDIDLARHFVEVTKGATATFDYVMRYLLFYKKKATSTAWHWNAELTIGPNIKIPIS
AFVKTKDEPVIKPWKKAIRDPVTSTSSTTEGVMRNKVLVNTENYSTVEPVDIVKGYHYGQ
QIIPLSEFDKSMLYEPGEKSLSVYGFTHADNIQWQSLNGDGLQYIFGRISDKKAQYAITC
LTESLHELNLVGIVRRVYNNGNAPKMFVIMPVIDPKEDCLCLSMAGICFKEDIKNMAFPQ
TKFKKFACSDEQVNAFKDLIQAMDLTSAYDDTFDDAEAFPIAETVSPTIQYVLDCIAYRA
MNPGKPLPEPRDDIMMLFRIPPLIEERSRDPINKLKQLFQLKKVEEKPKRRIKAQGRNDA
TILNQSVNPDQSNGDSDMPKVQLPIMNNKGSVRIGTIDPIDDFQTLTNNGKTLSDLAPDM
TDAIESLIYCNLDGNYSKALGAMAFFRHECVKVDPSPYNTWLLTFKNALTSRNNIDVINK
INEKKLGLILKEENPSSAYDAENSHEDSQLYENDTVPDDTELSIRPEINDLYAEMI
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaaggtagatcaaggtactatcattatcctagacgtcggcagaaatgtatca
ttaccagaagataataaaaagttggctcctgcagaagaaaataaaaatttctttctgaaa
gccaaagaatgcgctgctcgtataatagagcgcaagataatgacccaggctaataacttt
gtgggtgtcacattactagggtcaaagaaaaccaacaacactatggctgaagaagttgag
ggagcttttaggcacattgatgttctataccaactgcaaacccctacatggcaaatgata
agagatcttccaaaggagccaacaaagagcagaggtgattggtttgatgccttgattgtg
gctgccgatcaattcaagaaggaaatggagcgagctaagattgtgaacaagaagattatt
ctgatgactaacttccaatcacctgccaaaataaatgatgaccagattgaaatggttgta
aatggtttcaaggaggagaattttgaagtggatgttattggtcttgatcttactgatgaa
aatcataaaggggatgacattgacttggcacgtcattttgtagaagtgaccaaaggtgct
acagctacatttgattatgtcatgagatatttactcttttataaaaagaaggctaccagt
accgcatggcattggaatgcagagttgactattggccctaacattaaaattcctatctct
gcatttgtcaaaacaaaagatgagcctgtaataaagccttggaagaaagccatcagagat
cctgtcacatctacttctagcactactgaaggggtaatgagaaacaaagttttggtaaac
actgaaaactatagcacagtagaacctgtagatattgtaaaaggttaccattatggccag
caaataattccactgtctgaatttgataaatctatgctctatgagcctggggagaagtct
ttgtcagtttatgggtttactcatgctgataatattcaatggcaaagtcttaatggtgat
ggcttgcaatatatatttggaaggatatcagacaaaaaggcccagtatgcaataacatgc
ctgacagagagcctgcatgagttaaatttagttggtattgtgagaagagtatataataat
ggaaatgcccctaagatgtttgttataatgccagtgatagatccaaaagaagactgtctt
tgtttatctatggcaggaatttgttttaaagaagatattaagaatatggcatttccacaa
acaaaatttaagaaatttgcctgttctgatgagcaagttaatgctttcaaagatcttatt
caagccatggatttaacttcagcctatgatgacacctttgatgatgctgaagcttttcca
attgcagaaactgtcagtcctaccattcagtatgttcttgactgtattgcatacagagca
atgaacccaggcaagcctctaccggagcctagagatgacattatgatgttgtttagaata
cctcctttgattgaggaaagatctagggatcccataaataaactgaaacagttattccaa
ttgaagaaagttgaagaaaaaccaaaaagaagaattaaggcccagggaagaaatgatgct
actatactgaaccaatctgttaatccagatcaatcaaatggtgactctgatatgcccaaa
gtccaactgcctataatgaataataaaggttcagtacgaattggcacaatcgaccctatt
gatgatttccaaacactgacaaataatggcaaaactttgtcggatcttgctccagacatg
acagatgctatagaaagccttatatactgtaatttggatggaaactattccaaagcatta
ggtgccatggccttctttagacatgaatgtgttaaagttgatccatctccatacaacact
tggttacttacatttaaaaatgcacttacatctcgcaacaatattgatgttatcaacaaa
ataaacgaaaagaagttaggtttgattttaaaggaggaaaatccgtcaagtgcctatgat
gcagagaatagtcatgaagacagtcagctgtatgaaaatgacactgttcctgatgacaca
gagctgtctatcagacctgaaataaatgatttgtatgctgaaatgatttaa
DBGET
integrated database retrieval system
