Leguminivora glycinivorella (soybean pod borer): 125231800
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Entry
125231800 CDS
T09956
Name
(RefSeq) ATP-dependent RNA helicase DHH1-like
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgly03041
]
125231800
Enzymes [BR:
lgly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125231800
Spliceosome [BR:
lgly03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
125231800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
125231800
NCBI-ProteinID:
XP_047993337
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All DBs
Position
12:11280792..11283365
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AA seq
692 aa
AA seq
DB search
MVLGHNVSQGLRTQDVKITQDITFETMLLSISTLEGLKNSGFHKPSPIQLHGIPLGKCGF
DLLLEAKSGTGKTAVFTVIALEKIDLNNGLQAIILAPTREIAAQICDVIKQIGGQYIGLT
IEVVMGGLPVKEDIMKFKKKVHIVVGSPGRLHHLIRDSHIDVSAVRLLVLDEADKLMEKS
FRPDIECIFSALPLQKQIIFSSATFPEESKAFINEYVKVSQHVCPDSNSVLLGISQRVTT
VKHNANIIRQTQHRFEELLNILSKREFKQCLIFCNYQARVTDVYKMLKKAKWPAEKLYGQ
QEQLDRLEALKTLQEYKCRILIATDLAARGLDSSHVDLVVNFEMPHDWQTYLHRIGRAGR
FGAYGLAVTIVTDQEETKFKELLNSMHFQLDIRNFWNDEKFEYNDDEPTTPVGMPLEHTM
SLLNIDDETPNEDSYSEIWNTLVGEPLCSSNDIEPFDMLCSSFMETKDTVETFTDLLDSF
KNNLDENIDDMNEYHCLTQKISIAKYKQHTKQNNFLANNHVKTELEFEVVPSEEITQNDI
EPKSDVTRWKSNNRNKKLETPTKKSHPKNVKHVYLKEQKLESSQSKACPKRERYVFPGDK
KRNNSQRKSYPQNEHASPEESDDNGYNTASYDFKKSQCYSSHSYNYSKHSYKSRSHNEYQ
YLPDEYVQWYNTLKLRTQQIEMAVYLNEISQL
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgggccacaatgtatctcagggactgagaacgcaggacgttaaaataacccag
gatataacattcgaaacaatgcttttaagcatcagtactttggaaggtttaaaaaactct
ggtttccataaaccttcaccaattcaacttcatggcataccattaggaaaatgtggattc
gatttactattagaagctaaatcaggaaccggcaaaactgcagtattcacagtaatagct
ctggaaaaaatagatctaaataatggcctgcaagcaatcattctggcaccaacaagagaa
attgctgcccaaatttgtgatgtgataaagcaaattggaggacaatacataggtctcaca
atagaagttgttatgggtggcctaccagtcaaagaagacatcatgaaattcaaaaagaaa
gtccacatagtagttggcagccccggaagattgcatcacctcattagagatagccacatt
gatgtatctgctgtcagacttttagtcttggatgaagcagacaaactaatggaaaaaagt
tttaggccagacattgaatgtatattttctgctttaccactacagaaacaaattatattc
agcagtgcaacattcccagaagagtctaaagctttcattaatgaatatgtaaaagtttcc
cagcatgtttgtccggacagtaatagtgttctattaggaatttcacagagagtgaccaca
gtcaaacataatgcaaatatcattagacaaacacagcatagatttgaagaactccttaac
atactttcaaagagagagttcaaacaatgtcttatcttttgcaactaccaagcaagggta
acagatgtatacaaaatgttaaagaaggctaaatggccagcagagaagctgtatggccaa
caagagcagttggatcgcttagaagcattgaaaactttgcaggaatataaatgcaggatt
ttgatagctacagatctagcagccagaggtcttgactcttctcatgtagacctggttgtt
aactttgagatgccacatgattggcagacttatttacacaggataggcagagctggcaga
tttggggcgtatggcctagctgtcactattgttactgaccaggaagaaacaaaattcaag
gagttattaaactctatgcatttccaattagacataaggaacttttggaatgatgaaaag
tttgaatataatgatgatgaacccacaacacctgtaggaatgcctttggaacacaccatg
agcttgttgaatatagatgatgaaacacccaacgaggacagttacagtgaaatatggaat
acattagtaggtgaaccattatgtagcagtaatgacatagaaccttttgatatgctatgc
tcatcatttatggaaacaaaagatacagtagaaacttttacagacctgttagattcattt
aaaaacaatcttgatgaaaatattgatgatatgaatgaataccattgtcttactcagaaa
atatcaattgcaaaatataaacaacatacaaaacaaaataatttccttgcaaacaaccat
gtaaaaacagaattggaatttgaagtagttccatcagaagaaatcactcaaaatgatatt
gaacctaaatctgatgtaactagatggaaatcaaataacaggaacaaaaaattagaaacc
ccaacaaaaaaatcccatcccaaaaatgttaaacatgtctatttaaaggaacaaaaatta
gaaagctcacaaagtaaagcatgcccaaaacgcgagagatatgtatttccaggggataag
aaaagaaataattcacaaaggaaatcttatccccaaaacgagcatgcttctcccgaagaa
agtgatgacaatggatataacacagcctcctatgattttaagaagtctcaatgttattca
tcacatagttacaactattctaaacattcgtacaagtcaagaagtcacaatgaatatcaa
tatcttcctgatgaatatgttcaatggtacaacactttaaaattaagaacacaacaaatt
gaaatggctgtatatttaaatgaaatatcacaactgtag
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