Leguminivora glycinivorella (soybean pod borer): 125231806
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Entry
125231806 CDS
T09956
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125231806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgly03021
]
125231806
03041 Spliceosome [BR:
lgly03041
]
125231806
03036 Chromosome and associated proteins [BR:
lgly03036
]
125231806
Transcription machinery [BR:
lgly03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
125231806
Spliceosome [BR:
lgly03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
125231806
Complex B
125231806
Complex C
U2 SnRNP specific factors
125231806
Chromosome and associated proteins [BR:
lgly03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
125231806
TFTC complex
125231806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Fungal_virus_P2_N
Motif
Other DBs
NCBI-GeneID:
125231806
NCBI-ProteinID:
XP_047993342
LinkDB
All DBs
Position
12:complement(15393891..15404367)
Genome browser
AA seq
1219 aa
AA seq
DB search
MYLYNLTLQGSTAITHAVHGNFSGTKQQEIVISRGKILELLRPDPNTGKVHTLLKVEIFG
IIRSMMSFRLTGGTKDYIVIGSDSGRIVILEYIPAKNILEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP
MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITIETDDDMVTEIKLKYFDTVPVATSMCVLKTGFLFVACEFGNHYLYQ
IAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDELDSLSPILACHVADLAGEDT
PQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRHKDEEYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCHALGNDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTEXKKLSSDVSCMALGSVATGEQ
RAWFLAVGLNDNTVRIISLDPSDCLAPRSMQALPAGAESLCIVEQPFESGAKSALHLNIG
LSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSRTWLGYHYQNR
FHLTPLSYECLEYAAGFSSEQCAEGIVAISSNTLRILALEKLGAVFNQTYLPLEYTPRKF
VINSDNNQIIILETDHNSYTEEMKKQRRVQMAQEMREAAAGGGPEEQTLANEMADAFLSD
VLPENIFSSPKAGAGMWASQIRVVDMGAGSGGAPGTVARLPLEQNEAAVALCVVRWAAHA
EHAQPHLVVGVAKDLVLSPRACCEGSLHVYKIYANTGKLELVHKTPVDEYPGALAAFNGK
LLVGVGRMLRLYDIGWRKLLRKCENRHIPNLIADIKTIGQRIFVCDVQESVFCVKYKKRE
NQLIIFADDTNPRWITNSCLLDYDTIAMSDKFGNVAVVRLPQSVSDDVDEDPTGNKALWD
RGLLNGASQKGEIVVNFHVGETVTSLQRATLIPGGSEALLYATVSGSLGVLLPFTSREDH
DFFQHLEMHMRSENPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLEPAKQKAIAGDLE
RTPAEVSKKLEDIRTRYAF
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtatttatacaatttgactctacaaggctctacagccattacacatgctgttcacggg
aatttctccgggacgaagcaacaagaaattgtaatatcccgcgggaagatcttggaatta
ttacgacctgaccccaacaccggcaaagtgcacaccttgctgaaagtggagattttcggc
attatccggtcgatgatgtcatttcggcttactggcggcacaaaagattacattgtgatt
ggatcagactccggacgcatcgtcatcctggaatatattcctgctaaaaacatccttgag
aaagttcaccaagaaacctttggcaaatctggatgtcgcagaatagtccctggacagtat
ttagctattgacccgaaaggcagagctgttatgattggagccattgaaaaacagaaacta
gtgtacatattgaacagggatgccgaagcaaggttgactatctcttcaccattggaggcg
cacaagtcaaacacactggtgtatcatatggttggagtggatgtgggctttgaaaatccc
atgtttgcttgccttgagattgactatgaagaagctgactctgaccctacaggtgaagct
gcacaaaagacccagcagacattgacattttatgaactagacttgggccttaaccatgtt
gtaaggaaatactccgagcctctagaggaacatgccaacttccttattacagtacctgga
ggcaatgatggtccttctggagtactcatttgctctgagaactacttaacatacaagaat
ttgggagatcaacatgacattcgctgtcctattcctcgccggcgtaatgatttggatgac
cctgagagaggcatgatatttgtatgttccgccacacataagacaaaatccatgttcttt
tttttggcccaaactgagcaaggagacatttttaagataaccattgaaacagatgatgat
atggtgacagaaataaaactgaaatactttgatactgttccagtagccacttctatgtgt
gttttgaaaactggattccttttcgtggcctgtgaatttggcaaccattacttgtaccag
attgcacacttgggtgatgaagatgatgaaccagaattcagttcagccatgcctttggag
gagggagacacatttttctttgccccaagaccactcagaaacttagtgcttgtggatgag
ctggactcactttctccaatattagcatgtcatgtagctgatttggctggggaagataca
cctcaagtttacttggcttgtggtcgtggtcccagatcatccctgagggccttaaggcat
ggtttggaggtagcagaaatggccgtgtctgagcttccaggatctcctaatgcagtatgg
acagtcaggagacataaagatgaggaatatgattcgtacatcattgtgtcattcgtgaac
gccacgcttgtgctctctattggcgagactgtcgaggaagtgactgactctggcttctta
ggcacgacgccgactctaagctgccatgcgctcggaaatgatgctctagtacaagtatac
cctgatggcatccggcatattcgtgctgacaagcgtgtcaacgaatggaaggctcctggc
aaaaagaccatcgtaaaatgcgcagtcaatcagagacaagtagtcattgctcttactggt
ggtgaactggtctattttgagatggatccgactggtcaattgaatgagtacacagaanag
aaaaagttgtcatcagatgtgtcatgcatggctttaggctctgtagctactggagagcaa
agagcttggttcttagcagtgggtctcaatgacaacactgtcagaatcatctccttggat
ccatcggactgtttagcgccaaggtcaatgcaggccttacccgccggtgcagagtcgcta
tgcatagtggaacaaccattcgagtctggtgcaaaatctgctttacatctcaacattggt
ttaagcaatggtgtgttactcagaactacactggattctgtcagtggagatctagcagac
acaagaacaaggtacctgggttcaagaccagttaagctgtttaaagtgagagtacaagca
gcagaagcagtgcttgctgtatcatcaagaacatggcttggataccattaccagaaccgt
ttccacctgacgccactctcttatgaatgtcttgaatatgctgcaggattcagttcagaa
caatgcgcggaaggtattgtagcgatctcctccaatacgctgcgaattttggcactagaa
aaattgggagcagttttcaatcaaacttacctgccactggaatacacaccaagaaaattt
gtcatcaacagtgacaacaatcaaattattattttagagactgatcacaattcgtacacg
gaagagatgaaaaaacaaagaagggttcaaatggctcaagagatgcgcgaagcggcggcc
ggcggagggcccgaagaacagactctcgccaacgaaatggccgacgctttcctctctgac
gtgttaccagaaaacattttctcctcccccaaagccggcgcaggcatgtgggcgtcgcag
atccgcgtggtggacatgggcgcggggtcgggcggcgcgccgggcacggtggcgcggctg
ccgctggagcagaacgaggccgctgtggcgctgtgcgtggtgcgctgggccgcgcacgcc
gagcacgcgcagccgcacctcgtcgtcggcgtcgccaaggacctcgtgctgtcgccgcgc
gcctgctgcgagggcagcctgcacgtctacaagatctacgccaacaccggcaagctggag
ctcgtgcacaagacgccggtcgacgagtacccgggcgcgctcgccgccttcaacggcaag
ctgctcgtcggcgtcggccgcatgctccgcctctacgacatcggctggcggaagctcctc
cgcaagtgcgagaaccgacacattcccaatctcatcgcggacatcaagactatcggccag
agaatcttcgtctgcgacgtccaggagtccgtattttgcgtcaagtacaagaagcgggag
aatcagttgatcatattcgccgacgacacgaacccgcggtggatcaccaacagctgcctg
ctggactacgacacgatcgcgatgtcggacaagttcggcaacgtcgccgtcgtccggcta
ccgcagtccgtgtcggacgacgtcgatgaggaccccactggaaataaagctctttgggac
agaggccttctaaatggagcatctcaaaagggcgagatagtagttaacttccacgtgggt
gagacagtaacatcgctgcagcgagcgactctgatcccgggcgggtcggaggcgctgctg
tacgccaccgtcagcggctcgctcggcgtgctgctgcccttcacctcccgggaggaccac
gacttcttccagcacctcgagatgcacatgcgaagcgaaaacccgcccctttgcggacgg
gatcatctctcctttagaagttattattacccagtaaagaatgtgatagacggagacctg
tgcgagcagttcaactcactggagcccgcgaaacaaaaggcgatcgccggtgacctggag
cgaacgcccgccgaagtctcaaagaaactagaagatattagaactagatacgcgttttaa
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