Leguminivora glycinivorella (soybean pod borer): 125232016
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Entry
125232016 CDS
T09956
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B
KO
K12821
pre-mRNA-processing factor 40
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125232016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgly03041
]
125232016
Spliceosome [BR:
lgly03041
]
Complex A
U1 snRNP components
U1 related factors
125232016
Complex B
125232016
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
125232016
NCBI-ProteinID:
XP_047993586
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All DBs
Position
1:complement(28686867..28700137)
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AA seq
835 aa
AA seq
DB search
MDGSNTGTSSPGLMAAAPLLPPPMLGGLAPPMPPQVAMPPVPGITPAMAAMPPPMGFPPM
IPPFSMPPPGFPPFKPDLTAPAPEIAPISNHTSPWSEHKAPDGRTYYYNSVSKQSLWEKP
DDLKTPAEKLLSACVWKEYTTDAGRLYYHNIETKESSWVVPAELQEIKDKIAAEEAAQAA
MNGDLPPGEVPLPGSPAVPSSGSSALDEAMAKTLAAIDPSLVGSIPIPDDIEPEDVASPA
QAPGETAEAVPEPQYKDKKEAIEAFKELLKDKNISSNATWEQCVKIISKDPRYATFKKLN
EKKQAFNAYKTQKIKDEREELRLKTKKNRENLEEFLLSCDRVTSMTKYYKCDDMFSNLEI
WRCVPESDRRDIFEDCIFTIAKREKEEAKALKKRNMKMLAQVLENMNEITYSSTWSEAQV
LLLENSAFKNDVSLLGMDKEDALIVFEQHIKNMEAEYLQEKEQLKKRNKRQQRKNRDNFL
ALLDSLHEEGKLTSMSLWVELYPVISADMRFSAMLGQTGSTPLDLFKFYVENLKARFHDE
KKVIKEILKEKQFEVKPDTSFEEFATVVCEDSKSAALDAGNVKLTYNSLLEKAEARNKEK
MKEESKAQKKIESAFKWALSEANVDHQVPWSEVKEKLDLEAPEFAAVPDEDDRLRIYKDF
QNEQEESCMHYHHPKPRKAKRSKKKKRSHSQSLSPSKSRSGTPAPQRSASPGAASAASWS
SEERKHKKSKKKHKKPRDEPAPVQRSASPEEGGISDTSPPPQKKKKSKRSAPASPAAAAD
PDHAYKPKKKKEKRDKKDKERASSTSASATTTAWSDAELESRRAALLAQLHEHED
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggacgggtccaacactggcacaagctcgccaggattgatggcagcggcgccgctgttg
ccgccgccgatgctgggcggactagcgcccccaatgccgccgcaagtggcgatgcccccg
gtacctggaattactccagcaatggctgcaatgcctcctcctatgggttttccacctatg
atacctccgttctcgatgcctccgccaggatttccaccatttaaacccgacctaactgcg
ccagccccagaaattgctcccatttccaaccacaccagtccctggtcagaacacaaggcc
cctgatggccggacatattactacaactcagtgtcaaagcagagtctatgggagaaaccg
gatgatttgaagactcctgctgagaaactgctttctgcctgtgtgtggaaagagtataca
acggatgctggccggctgtactatcacaacattgagactaaggagtccagttgggttgtt
cctgccgagctgcaggagatcaaggataagattgctgcagaggaagctgcacaagcagct
atgaacggggacctgcctcctggagaggtgcccctgccagggtctccagcagtgcccagc
tccggcagctcggcacttgatgaagccatggccaagacccttgcggctatagacccttct
ctagttggctctatacctatacctgatgacattgaacctgaagatgtagcttcacctgcc
caggccccaggagagacagctgaagccgtaccagaaccacagtacaaggacaagaaagaa
gctattgaggctttcaaagaacttctcaaagataaaaatatttcatcaaatgctacctgg
gagcaatgtgtgaaaatcatatctaaggatcctcgatatgccacctttaaaaaactcaat
gagaaaaaacaagcttttaatgcatacaaaacacagaaaatcaaagatgagagagaagaa
ttaaggttaaaaacaaagaaaaatcgggaaaaccttgaagaattcttgctgagttgtgac
cgtgtgacatccatgacaaagtattacaagtgtgacgacatgtttagcaatttagagata
tggcgatgtgtgccagagtcagaccgtagagacatttttgaagactgcatatttacgata
gcgaaacgtgaaaaagaggaggctaaggcattgaagaaacggaacatgaaaatgttggca
caggtattagagaatatgaatgaaatcacatacagcagcacatggagcgaggcgcaggtg
ttgttgttggaaaactctgccttcaagaatgacgtcagtctgctcggcatggacaaggag
gatgcgctcatagtttttgaacaacacataaagaatatggaagctgaatatttacaagaa
aaagaacagctcaaaaagagaaacaaacggcaacagagaaaaaacagagacaactttttg
gccttgctggacagtctgcatgaggaaggcaagcttacatcaatgtcgctgtgggtggag
ctgtaccctgtcatctccgctgacatgcgcttctctgctatgctaggtcaaacaggttca
accccactagacttattcaaattctacgtggagaacctaaaggcgcgcttccacgacgaa
aagaaggtcatcaaggagatcctcaaagaaaagcagttcgaagtgaaaccggacaccagc
ttcgaggagttcgctaccgtcgtgtgcgaggacagcaagtcggccgccttggacgccggc
aatgtcaagctcacgtacaactcgctgctagagaaggctgaagcaagaaacaaagaaaaa
atgaaagaggaatcaaaggctcaaaagaagatagaaagcgcgttcaaatgggcactaagc
gaagccaacgtggaccaccaggtgccttggagcgaagtcaaggagaaactcgacctggag
gcgccggagttcgcggctgtgcctgatgaggacgaccgccttaggatatacaaggacttc
caaaacgagcaagaggagagctgcatgcactaccaccacccgaagccgcggaaggccaag
cgctccaagaaaaagaagcggtctcactcacaatctctgtcgccgtccaaatcgaggtca
ggcacgccggccccgcagcgctccgcgtccccgggcgccgcaagtgccgcctcctggagc
tcagaggagcgcaaacacaagaagtccaagaagaagcacaagaaaccacgcgacgaacct
gcacccgtacagcgttcagcgtcaccggaggagggcggtatctcggacacgtcgccgccg
ccacaaaagaaaaagaagagcaagcgcagcgcgcccgcctcccccgccgccgccgccgac
cccgaccacgcctacaagcccaagaagaagaaagagaaacgcgacaagaaggacaaggaa
agggcgtcatcgacgtcagcatcggccacgacgacggcgtggagcgacgcggagctggag
tcgcggcgcgcggcgctgctggcgcagctgcacgagcacgaggactga
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