Leguminivora glycinivorella (soybean pod borer): 125232107
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Entry
125232107 CDS
T09956
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IX) chain-like
KO
K06823
collagen type XVIII alpha
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lgly04147
]
125232107
00535 Proteoglycans [BR:
lgly00535
]
125232107
00536 Glycosaminoglycan binding proteins [BR:
lgly00536
]
125232107
Exosome [BR:
lgly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125232107
Proteoglycans [BR:
lgly00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
125232107
Glycosaminoglycan binding proteins [BR:
lgly00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125232107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Motif
Other DBs
NCBI-GeneID:
125232107
NCBI-ProteinID:
XP_047993679
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All DBs
Position
12:complement(15967866..16224039)
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AA seq
1174 aa
AA seq
DB search
MALFWCRTLPFALLSTLTAANDGLFGSSKYPNEIPEYDLLHAIGVPFSNPKTQYFDEGLD
GFPAYGLKPGSDIKSPYRLFMPEKLYPEFSITATVRPATENGGFLFSVVNPLETVVQLGV
QLIPSGRDLTNISLLYTDANVYALSQTIVSFAIPSFSKKWSRFGLKVTTENVTLYLNCHE
FDTVPVKRNPMELVFDSASTLYVGQAGPLIRGAFHGAFQELKLYGSPSQAEVQCVNTFEE
MGKGSGADEIDIDNFLVDQEEGDAEGSGRFGTIPPFPPPPPGLDGYPMALRGEKGERGPR
GIPGESIRGPQPPGPPGPPGPPGTTAIAEISGSGDDQIFGENYVSLGQCGCNSSTILSLL
ETAPELQGPPGPPGLVGADGRTGPPGIGGQPGMPGERGPIGPRGDKGDRGDSGPRGPEGQ
LGPKGEPGVDGRIGSPGPPGPPGPPGSSDYNNFDESLLGSYGGAIGRPGAPGPKGDAGQM
GPTGPQGERGFAGPKGERGQPGLNGPKGDRGHPGSQGDRGLKGDRGNPGLDGRPGIPGAN
GRPAEKGEKGERGSPGPPGPPLAGGYIPDSAESLITGPKAVSKGDKGDKGEKGSQGNDGA
AGFPGKDGKPGERGDIGPSGLPGVMGPPGALGLKGERGERGPPGPISITSTGSDIITVKG
EKGDAGPRGRRGRPGTSGPRGLQGIQGLPGPPGRPGDKGDTGFPGWVGRPGSSGKPGLPG
PVGPKGDKGEPGESLLDISTLKGEKGDRGYDGVPGAPGVMGPPGPPGPKSDPVQYIPGPP
GPPGPPGPPGVSIIGPKGEPGMSVYEEHPVHGNTKFFGRPPVKASALDELKALRELKDLK
EKDRHKDAQPVYGASSQRTEEANTAPTMPGAAVFQTTEEMMRLASASPVGALAYVTEEQA
LFVKVNSGWQYVLLGSLVTQSPQAPATPAPAPLPMPAASLVHEMPLSNSIHSESDVSDGP
RLRMAALSEPMSGNMHGVRRADYSCYRQARRAGLRGTFRAFLTSRSTNLDATVRFADHHL
PVVNTRGDVIFKSFSSIFDGNGGIMAGASRIYSFDGKNLMTDPHWPHKIIWHGSHASGER
ALDAFCEEWSSHDPHRSGLAASLYSHKLLSQERYSCNNHFIVLCVEVSSKTMRNKREAPR
FNMTNLLDDEDYLYNAEEYQQLLNEIFAQPFREN
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgttttggtgtcgaacgctaccgttcgctcttctctcgacgctcacggccgct
aatgatggattgttcggctcctctaaatatcctaacgaaataccggaatacgacttacta
cacgcaatcggcgttcccttcagcaaccccaagacgcaatacttcgacgaaggcctcgac
ggcttcccggcatatgggctgaaacccggctccgacatcaaatcaccttaccgcctcttc
atgcccgaaaaactgtacccagaattctccataacagccacagtccgacccgccaccgaa
aacggcggctttctattctctgtcgtaaatcctttagagacggtggtccaattgggagta
cagttgatcccgtcggggagagatctcacaaatatatcccttttatatacagatgcaaat
gtctatgccctctcgcagacaattgtgtcgttcgctataccatcgttttctaagaaatgg
agtcgcttcggattgaaggttactacagagaatgtgacgttgtatctgaattgtcacgaa
tttgatactgtgcctgtgaagaggaatccgatggagttggtattcgattcagcgtcgact
ctgtacgtggggcaggcggggccgcttatccgaggcgcttttcacggtgcgtttcaagaa
ctgaagttgtacggatccccttcgcaggctgaagtgcaatgtgtcaacactttcgaggaa
atgggtaaaggcagtggagcagacgagattgacattgacaattttttggtggaccaagaa
gaaggtgatgcggaaggctcagggcgcttcgggacgatcccccctttcccgcccccgccc
ccaggactcgacggttatccaatggcacttagaggagagaagggcgaacgaggaccaagg
ggtatacccggggagtcaatacggggcccccagcccccggggccgccggggcctccaggc
cctcccggaaccaccgccatcgccgagatctcgggctcaggtgacgatcaaatcttcggt
gaaaactacgtatccctcgggcagtgtgggtgcaactcctcaacgattctgtcgctgttg
gaaacggcgcctgagctgcaggggccgccgggtccacctggcttggtgggtgctgatgga
cgcaccggccctccgggtataggaggtcaaccaggaatgcccggtgagcgaggcccgatt
ggaccacgaggagataaaggcgataggggagactcaggcccgcgcggaccagagggccag
ctggggcctaaaggggaacctggggtagatgggagaataggcagccccggccctcctggt
ccacctggcccccctggatcctctgattacaataactttgacgaatccctactcggttct
tacggaggggccattggccggccaggtgcgccgggacccaaaggtgacgctggccagatg
gggccaacggggccccaaggagagcggggattcgcggggcctaagggggaacgaggacaa
ccgggactgaacggaccaaaaggagatcggggtcatccagggtcacaaggcgatcgtgga
ctaaaaggtgacagaggcaaccctggcctcgacggcagacccgggataccaggagccaat
ggaagaccggcggagaagggcgaaaaaggtgaacgtggatctcccgggcccccaggacct
cctttggcaggtggatacattcctgacagcgcggaatctttaattactggaccaaaggct
gtttcaaagggtgacaaaggtgataagggcgaaaagggtagtcaaggcaacgacggagcg
gctggcttccctgggaaagatggaaaacccggggaacgcggggacattggaccatcgggt
ctgccgggcgtgatgggtccacctggtgcacttggacttaaaggggagaggggggagcgc
ggaccacctggacctatcagcattacttctactggatcggacattattactgtcaagggc
gagaaaggtgacgctggacctcgtggacgcagaggcagacccggtacgagcggcccgcgc
ggcttgcaaggaatacaaggattgccgggccctccgggcagaccgggtgataagggcgac
actggcttccctggatgggtgggcagacccgggtcttccggaaaacctggattacctggc
cctgtcggaccaaaaggagacaagggcgaaccgggtgaaagcctcctggatatatctacg
ctcaaaggtgaaaaaggcgatcgaggttatgacggcgtgccaggtgctccaggtgttatg
ggcccacctggtcccccaggccccaagtccgaccctgtccaatacattcccgggcctcca
gggcccccgggacccccaggacctcccggtgtctccattatcggacctaaaggagaacca
ggcatgagcgtttatgaagaacatcctgtacatggaaatacgaagttttttggacggccg
cctgtcaaagctagtgctcttgacgagctcaaggctttaagggagttaaaagaccttaag
gaaaaagatcgacacaaagacgctcaacccgtgtatggcgccagcagtcaaagaacagaa
gaagctaatacagctccaactatgcctggtgctgcagttttccagactacagaagaaatg
atgaggttggcatcagcaagtcctgtgggtgctctagcttacgttactgaggagcaagcc
ctgttcgttaaggtgaattctggatggcaatacgtacttctcggatctctcgtaacgcag
tcaccacaggccccagcgacccctgcgcctgcgcctctgcccatgccggctgctagcttg
gtgcatgaaatgccactgtcgaactcgatacacagtgaatctgatgtttctgatggaccc
agacttcggatggcagccttgagtgagcccatgtctggtaacatgcacggcgtgcgtcga
gcagactattcctgctacaggcaagcgcggcgggccgggctaagagggaccttcagagcc
ttcctcactagcagatcgacaaacttagacgctacagtccgcttcgccgaccaccatctg
ccagtggtgaacacccgtggtgacgtcatcttcaaatccttttcaagcatctttgacggg
aacggcggcatcatggctggcgcttccaggatatacagcttcgatgggaaaaatctgatg
acggatccacattggccgcacaagataatttggcatggctcacacgcgagcggcgaaaga
gcgttggacgcgttctgtgaagaatggtcctctcatgaccctcataggtccggcttggct
gcgtctctgtattcccataagctgctatctcaagagaggtactcctgtaataaccacttc
atagtcctttgtgtggaagtgtcatcgaaaactatgcgtaataaaagagaagcacccagg
ttcaatatgaccaacctgttagacgacgaagattacctctataacgcggaagaataccag
cagctgctaaacgaaatatttgctcaacctttcagagaaaactag
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