Leguminivora glycinivorella (soybean pod borer): 125232447
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Entry
125232447 CDS
T09956
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgly03041
]
125232447
Spliceosome [BR:
lgly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125232447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
Mononeg_mRNAcap
Motif
Other DBs
NCBI-GeneID:
125232447
NCBI-ProteinID:
XP_047994060
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All DBs
Position
13:13981892..14006291
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AA seq
990 aa
AA seq
DB search
MDTDEGPLINENSNGLSHLLTXGEFNSVDAVGVDESSTSNPGFLNAVEFSAGSVGDYLVN
NTDGFNTELNSFDVGDNAVTFAGDSLNHVLSDGDSHLSDGYKAVSDTDGDLLGTTAKMDM
DNEISEISNDIAEDTLDKTDEDNAIHEIESSNDAAITLDADEGAANVETIKADNEAPTEE
EAVKPMEEVEQVTPSTEAEEVVSPKDAAEVEAEKQEVQETAEEAPQTVKELETEETETEE
ISQKKNTQTTDVEMAAEKSPEVSRGAEETEVVSEDELPAVQKPSVKDAENVSDDELPGPK
PAELPADTEVVSEDELPEKKESKESRKRKTDDDKDGYDPGSPTSESESSSKKQAVVKNGE
SKPVPSEKRPSVDEKPKKKALPELDKYWKVVNDDPTDFTGWTYLLQYVDQESEVEAAREA
YDAFLSHYPYCYGYWRKYADYEKRKGSKKKCLEVLERGLKAIPLSVDLWIHYLNHIKATR
TEDHAYIKAQYERAIEACGLEFRSDRLWESYIKWEAENGSALNVTNIYDRLLATPTLGYT
SHFDNFQEHVMSEPVTGVISRSELVRLRGDVRDAVREAGGAAPQLDLPPGEDEPQDHIAS
DEEAQAIKERIIAARRKVHKTTGEQVAARWTFEEGIKRPYFHVKPLERCQLKNWKAYLEW
EKQHGSLKRALVLHERCLIACALYDEFWMRLIKFLEERIETNPELVAVEREVLERACTVH
HLDKPELHLHWAHFEEAHGNAARAAEILDRIEKTCPALVQIQYRRVNLERRRGDYDKCAQ
LYETYISAAKNKAIASALSIKYARFLQHVRQQPAAARKALDEAVARDPLNQRLHMQRLDL
ALHTSGTPYEQLEELVSSYEKQEGAELETSAALAWRRRELAEELGSAGAARAAAQHARTL
AKHLRKRARKDKHDAPPPPNASTDTKKKEATSSATTTAASSAYYQXPAATTQSYEQSYQP
PYQPPWGYQQPGPYHHPPHPHPWPQYPNYY
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatgagggccctttgattaacgaaaattcaaatggcctatcccatttgttg
actngaggggagttcaacagtgtagacgcggtaggggtagacgagtcgtccacgtccaac
ccgggctttctgaatgccgtcgagttttctgcagggagcgttggagactatttggtaaac
aatactgatggcttcaacactgaattgaattcgttcgatgtcggcgacaatgccgtgact
tttgcgggagactctttgaaccatgtgttatcggatggggactcgcatctgagcgacggg
tacaaggctgtctcagacacggatggtgatttattaggtacaacagcaaaaatggacatg
gataatgaaataagtgaaatatcaaatgatattgctgaagacacattagataagactgat
gaagacaatgcaattcatgagatagagtcgtcaaatgatgctgccatcacactagatgca
gatgaaggagctgctaatgtcgaaacaattaaagctgataatgaagcgcctactgaagaa
gaagctgtcaagccaatggaagaagttgagcaggtcaccccatcaacagaagcagaagag
gttgtctcaccaaaagatgcagctgaagttgaggcagagaaacaggaagtgcaggagact
gcagaagaagcacctcagactgtaaaagagctggaaactgaggaaacagaaactgaagaa
atttcacagaaaaagaacacacagactacagatgttgaaatggcagctgagaaaagtcca
gaggttagcagaggtgcagaagagactgaagtggtgtcggaagacgaactccccgctgtt
cagaagccgagtgtgaaggatgccgaaaatgtctccgatgatgaacttcctggacccaag
cctgctgaacttcctgctgatactgaggttgtatcggaggatgagctgccagagaagaaa
gagtcgaaggagtctcggaagcgcaaaacggacgacgacaaggacggctacgatcccggc
tcccccacctctgaaagcgagtcctccagcaagaagcaagctgttgtcaagaatggcgaa
agtaagccggtgccctccgagaagcggccgtcagtggacgagaagcccaaaaagaaagct
ctcccggagctcgacaagtattggaaggtcgtcaacgatgaccccactgacttcactggc
tggacttatctgctgcaatatgttgatcaagagagcgaagtggaggccgcgagagaggcc
tacgacgcgttcctctcgcactacccctactgctacggctactggcgaaagtacgccgac
tacgagaaacgcaaaggaagtaaaaagaagtgccttgaggtgttggaaagggggctgaaa
gccatcccactgtcggttgatctttggatacactacctcaatcacattaaagccactaga
accgaagatcatgcgtacattaaggcgcagtacgagagagctatagaggcgtgcgggctg
gagttccgctcggaccgtctgtgggagtcgtacatcaagtgggaggccgagaacggctcc
gcgctcaacgtgaccaacatctacgaccgcctgctggccacacccaccctcggatacact
tcgcacttcgacaatttccaagagcacgtgatgtctgaaccggtgacgggcgtgatatcg
cgttcggagctggtgcgcctgcgcggcgacgtgcgcgacgccgtgcgcgaggcgggaggc
gccgcgccgcagctcgacctgccgcccggcgaggacgagccgcaggaccacatcgcttca
gacgaggaggctcaagcgatcaaggagcgtataatcgcggcgcgccgcaaagtgcacaag
accacgggcgagcaagtcgccgctcggtggaccttcgaggagggcatcaagcggccctac
ttccacgtaaaacccctggagcgttgccagctgaagaactggaaggcgtacctagagtgg
gagaagcagcacggctcgttgaagcgtgcgttagtgttacatgaacgttgcctcatcgcc
tgtgcactctacgacgaattctggatgcggctgataaaattcctagaagagcgcatagaa
acgaacccggaactagtggccgtggagcgcgaggtcctcgagcgcgcatgcaccgtgcac
cacctcgacaagccggagctgcacctgcactgggcgcacttcgaggaggcgcacggcaac
gccgcccgcgccgccgagatactcgaccgcatcgagaagacctgccccgcgctcgtgcag
atacagtacagacgtgtgaacctggaacgtcgccgtggggattacgacaagtgcgcgcag
ttatatgaaacttacataagtgctgccaaaaataaggctatcgcgtcagcgctatccatc
aaatacgcccgcttccttcaacacgtgcggcagcagccagccgccgctcgcaaggcgctg
gacgaggccgtggcgcgcgacccgctcaaccagcgcctgcacatgcagcgcctcgacctc
gcgctgcacacgtccggcacgccctacgagcagctcgaggagctggtatcctcgtacgag
aagcaagaaggcgcggagctcgagacgagcgcggcgctggcgtggcggcggcgcgagctg
gcggaggagctgggctcggcgggcgcggcgcgcgcggcggcgcagcacgcgcgcacgctg
gccaagcatctgcgcaagcgcgcgcgcaaggacaagcacgacgcgccgccaccgcccaac
gccagcaccgacacgaagaaaaaggaagcgacctctagtgcgacgacgacggcggccagc
tccgcctactaccaanaccccgccgccaccacgcagtcgtacgagcagtcctaccagccg
ccctaccagccgccctggggctaccagcaacccggcccctaccaccacccgccgcacccg
cacccctggcctcagtaccccaactactactag
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