Leguminivora glycinivorella (soybean pod borer): 125232478
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Entry
125232478 CDS
T09956
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03013
Nucleocytoplasmic transport
lgly03015
mRNA surveillance pathway
lgly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125232478
09122 Translation
03013 Nucleocytoplasmic transport
125232478
03015 mRNA surveillance pathway
125232478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125232478
03041 Spliceosome [BR:
lgly03041
]
125232478
03009 Ribosome biogenesis [BR:
lgly03009
]
125232478
03012 Translation factors [BR:
lgly03012
]
125232478
Enzymes [BR:
lgly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125232478
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125232478
mRNA cycle factors
Stress granule specific factors
125232478
Spliceosome [BR:
lgly03041
]
Complex C
Other components
EJC/TREX
125232478
Ribosome biogenesis [BR:
lgly03009
]
Eukaryotic type
90S particles
Helicases
125232478
Translation factors [BR:
lgly03012
]
Eukaryotic type
Initiation factors
eIF-4
125232478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Cas3-like_C_2
AAA_30
UvrD-helicase
TniB
Utp25_C
Motif
Other DBs
NCBI-GeneID:
125232478
NCBI-ProteinID:
XP_047994117
LinkDB
All DBs
Position
13:11748310..11751153
Genome browser
AA seq
405 aa
AA seq
DB search
MTASEASYNRKIISEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ
RSIQPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQKVI
LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRAIKMLVL
DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDEL
TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSS
MHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIG
RSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgtcagaggcttcgtacaatcgaaaaataatttcggaagatttgtcaaatgtt
gaattcgacacaagcgaagatgtggaagttattcccacatttgattccatgggccttcgg
gatgaattgctgagaggaatttatacttatggattcgagaaaccttccgctattcagcag
agaagtattcagccaattgtgaaaggcagagacgtaatcgcccaggcccagtcaggcacg
ggtaaaaccgccacattttcaatttccattctgcagtcgttggacacgactcttcgtgag
acgcaggttctggtgttgtcgcccactcgcgagttggctacacagattcaaaaagttatc
ctggctttgggagattttatgaatgttcagtgccatgcttgcattggaggcacaaatctt
ggtgaagatattaggaagttggattatggccagcatgtagtttctggaactccaggaaga
gtttttgacatgatcagaagacgtgtactccgtaccagagcaattaagatgctggtcctt
gacgaagctgatgagatgcttaacaagggcttcaaagagcagatttatgatgtctaccgt
tacctgccaccggcaacacaagtggtactcatatctgctactttgcctcatgagatattg
gaaatgacttccaagtttatgacagatcccattaggattttagttaaacgtgatgaattg
acacttgaaggcatcaagcagttctttgtagccgtggagcgtgaggagtggaagttcgac
acactttgtgacttgtacgacacattgaccattacacaagctgtgatattctgcaacacc
aagaggaaggtggactggctcacacaaaaaatgcaggaagccaacttcacagtcagctcc
atgcatggtgacatgccgcaaaaggagagagataatatcatgaaggagttcagatcagga
caaagccgcgtgttaatcacaactgatgtttgggcaagaggtattgatgtccaacaagta
tcccttgtcatcaactatgacctgcccaacaaccgcgagttgtacatccacaggattggt
cgttcaggccgtttcggacgcaagggtgttgcaatcaatttcgtcaaatcagatgatatc
agaatcctgagagatattgagcagtactactcaacacagattgatgagatgccaatgaat
gttgctgacctcatctaa
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