Leguminivora glycinivorella (soybean pod borer): 125232502
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Entry
125232502 CDS
T09956
Name
(RefSeq) collagen alpha-1(II) chain-like isoform X1
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Fib-H_N
Motif
Other DBs
NCBI-GeneID:
125232502
NCBI-ProteinID:
XP_047994153
LinkDB
All DBs
Position
13:6148374..6169650
Genome browser
AA seq
2194 aa
AA seq
DB search
MRATTIVILCCAVAYAAALQGAEDEALAAMWNLEKQMKETAYDKSDSYSVENGTTWEKET
TRKQYHRKVAKPNISGEDKIVRTFVIETDADGQETIYEEDVVIHKVPGGGSTSTTTGRRA
ISGFGSSSTSSSAAASAGAGSGPPYGSGSSSANAAASAQSGPQGPSGYPGSYGQGSSANA
AASAQAGQGPAGSQGPLGPQQGPAGQGPQGPGASANAAASAQSGPNGPQGSGASASAGAS
AQSGSNGPYGPYGPQGSGASGSAGASSQSGQNGPYGPYGPQGPAGPLGPQGSGASANAAA
SAQQGPNGPQGSGASGSAGASSQSGSNGLYGPYGPQGPAGPQGPLGPQGSGASANAAASA
QSGPNGPQGPGASANAAASAQSGPNGPYGPYGPQGPAGPQGPAGPGASANAAASAQSGPN
GPQGSGASGSAGASSQSGQNGPYGPYGPQGPAGPLGPQGSGASANNAASAQQGPNGPQGS
GASASAGASSQSGSNGPYGPYGPQGSGASASAGASSQSGQNGPYGPYGPQGPAGPLGPQG
SGDSANAAASAQQGPNGPQGSGASASAGAFSQSGSNGLYGPYGPQGPAGPQGPLGPQGPG
ASANAAASAQSGPNGPYGPYGPQGPAGPLGPQGSGASANAAASAQQGPNGPQGSGASARA
GASAQSGPNGPYGPYGPQGSGASASAGASSQSGQNGPYGPQGPAGPLGPQRSGASANAAA
SGQQGPNGPQGSGASASAGASSQSGSNGPYGPYGPQGSGASASAGPSSQSGQNGPYGPYG
PQGPAGSLGPQGSGASANAAASGQQVPNGPQGSGASASAGASSQSGQNGPYGPYGPQGPA
GPLGPQGSEASANAAASAQQGPNGPQGSGASASAGASSQSGSNGPYGPYGPQGSGASASA
GASSQSGQNGPQGSGASANAAASAQSGPNGLYGPQGPAGPQGPLGPQGPGASANAAASAQ
SGPNGLYGPYGPQGPAGPLGPQGSGASANAAASAQQGPNGSQGSGASASAGASAQSGPNG
PYGPYGPQGPAGPLGPQGSEASANAAASAQQGPNGPQGSGASASAGASSQSGSNGPYGPY
GPQGSGASATAGASSQSGQNGPQGSGASANAAASAQSGPNGLYGPQGPAGPQGPLGPQGP
GASANAAASAQSGPNGLYGPYGPQGPAGPLGPQGSGASANAAASAQQGPNGSQGSGASAS
AGASAQSGPNGPYGPYGPQGPAGPLGPQGSEASANAAASAQQGPNGPQGSGASASAGASS
QSGSNGPYGPYGPQGSGASANAAASAQQGPNGPQGSGASARAGASAQSGPNGPYGPYGPQ
GSGASASAGASSQSGQNGPYGPQGPAGPLGPQGSGASANAAASGQQGPNGPQGPGASASA
GASSQSGQNGPYGPYGPQGPAGPLGPQGSGASASAAASGQQVPNGPQGSGASASAGASSQ
SGQNGPYGPYGPQGSGASASAGASSQSGQNGPQGSGASANAAASAQSGPNGLYGPQGPAG
PQGPLGPQGPGASANAAASAQSGPNGLYGPYGPQGPAGPLGPQGSGASANTAASAQQGPN
GSQGSGASASAGASAQSGPNGPYGPYGPQGPAGPLGPQGSEASANAAASAQQGPNGPQGS
GASASAGASSQSGSNGPYGPYGPQGSGASASAGASSQSGQNGLYGPQGPAGPQGPLGPQG
PGASANAAASAQSGPNGLYGPYGPQGPAGPLGPQGSGASANAAASAQQGPNGSQGSGASA
SAGASAQSGPNGPYGPYGPQGPAGPLGPQGSEASANAAASAQQGPNGPQGSGASASAGAS
SQSGSNGPYGPYGPQGSGASASAGASSQSGQNGPQGSGASANAAASAQSGPNGLYGPQGP
AGPQGPLGPQGPGASANAAASAQSGPNGLYGPYGPQGPAGPLGPQGSGASANAAASAQQG
PNGSQGSGASASAGASAQSGPNGPYGPYGPQGPAGPLGPQGSEASANAAASAQQGPNGPQ
GSGASASAGASSQSGSNGPYGPYGPQGSGASASAGASSQSGQNGPQGSGASANAAASAQS
GPNGLYGPYGPQGPAGPLGPQGSGASANAAASAQQGPNGSQGSGASASAGASAQSGPNGP
YGPYGPQGSPVIIIEEVPSSASATANANANAVSYGTVAPYGSSANAGASAAAGSGYGSGS
GSGLPWFGGRKVCRLSRRQFVVKIGTRRQPCLTC
NT seq
6585 nt
NT seq
+upstream
nt +downstream
nt
atgagagcaaccaccattgtgatcttgtgctgtgccgtggcgtatgctgccgccctacaa
ggcgcagaagatgaagcccttgcggctatgtggaacttagaaaaacaaatgaaagaaacc
gcatacgacaaatccgattcttactcagtcgaaaatggaacgacttgggaaaaagaaacg
actcgaaaacagtaccacagaaaggttgccaagcctaatatctcaggcgaagacaagatc
gtgaggaccttcgtcatcgagactgatgctgacggccaagagaccatctatgaagaggat
gtggtgatccataaggtgccaggtggcggaagcacatctaccaccactggacgccgcgcc
atttccggtttcggaagctcctcaacaagttccagcgccgcagccagtgccggcgccggc
tctggcccgccatatggttcaggatcctcatcagctaatgctgctgcatcagctcaatca
ggaccacaaggaccaagcggatatccaggctcatatggacaaggatcgtcagccaatgct
gccgcttctgcccaagcaggacaaggcccagccggatcacaaggaccactcggaccacaa
caaggaccagccggacaaggaccacaaggaccaggagcttcagctaacgctgcagcctct
gcccaatcagggccaaacggaccacaaggatcaggagcctcagccagcgctggcgcctct
gcccaatcaggatcaaacggaccatacggaccatacggaccacaaggatcaggagcctca
ggcagcgctggcgcctcttcccaatcaggacaaaacggaccatacggaccatacggacca
caaggcccagccggaccactcggaccacaaggatcaggagcttcagctaacgctgccgcc
tctgcccaacaaggaccaaacggaccacaaggatcaggagcctcaggcagcgctggcgcc
tcttcccaatcaggatcaaacggactatacggaccatacggaccacaaggcccagccgga
ccacaaggaccactcggaccacaaggatcaggagcttcagctaacgctgccgcctctgct
caatcaggaccaaacggaccacaaggaccaggagcttcagctaacgctgctgcctctgcc
caatcaggaccaaatggaccatacggaccatacggaccacaaggaccagcaggaccacaa
ggaccagccggaccaggagcttcagctaacgctgccgcctctgctcaatcaggaccaaac
ggaccacaaggatcaggagcctcaggcagcgctggcgcctcttcccaatcaggacaaaac
ggaccatacggaccatacggaccacaaggcccagccggaccactcggaccacaaggatca
ggagcttcagctaacaatgccgcctctgcccaacaaggaccaaacggaccacaaggatca
ggagcctcagccagcgctggcgcctcttcccaatcaggatcaaacggaccatacggacca
tacggaccacaaggatcaggagcctcagccagcgctggcgcctcttcccaatcaggacaa
aacggaccatacggaccatacggaccacaaggcccagccggaccactcggaccacaagga
tcaggagattcagctaacgctgccgcctctgcccaacaaggaccaaacggaccacaagga
tcaggagcctcagccagcgctggcgccttttcccaatcaggatcaaacggactatacgga
ccatacggaccacaaggcccagccggaccacaaggaccactcggaccacaaggaccagga
gcttcagctaacgctgccgcctctgcccaatcaggaccaaacggaccatacggaccatac
ggaccacaaggcccagccggaccactcggaccacaaggatcaggagcttcagctaacgct
gccgcctctgcccaacaaggaccaaacgggccacaaggatcaggagcctcagccagagct
ggcgcctctgcccaatcaggaccaaacggaccatacggaccatacggaccacaaggatca
ggagcctcagccagcgctggcgcctcttcccaatcaggacaaaacggaccatacggacca
caaggcccagccggaccactcggaccacaaagatcaggagcttcagctaacgctgccgcc
tctggccaacaaggaccaaacggaccacaaggatcaggagcctcagccagcgctggcgcc
tcttcccaatcaggatcaaacggaccatacggaccatacggaccacaaggatcaggagcc
tcagccagcgctggcccctcttcccaatcaggacaaaacggaccatacggaccatacgga
ccacaaggcccagccggatcactcggaccacaaggatcaggagcttcagctaacgctgcc
gcctctggccaacaagtaccaaacggaccacaaggatcaggagcctcagccagcgctggc
gcctcttcccaatcaggacaaaacggaccatacggaccatacggaccacaaggcccagcc
ggaccactcggaccacaaggatcagaagcttcagctaacgctgccgcctctgcccaacaa
ggaccaaacggaccacaaggatcaggagcctcagccagcgctggcgcctcttcccaatca
ggatcaaacggaccatacggaccatacggaccacaaggatcaggagcctcagccagcgct
ggcgcctcttcccaatcaggacaaaacggaccacaaggatcaggagcttcagctaacgct
gccgcctctgcccaatcaggaccaaacggactatacggaccacaaggcccagccggacca
caaggaccactcggaccacaaggaccaggagcttcagctaacgctgccgcctctgcccaa
tcaggaccaaacggactatacggaccatacggaccacaaggcccagccggaccactcgga
ccacaaggatcaggagcttcagctaacgctgccgcctctgcccaacaaggaccaaacgga
tcacaaggatcaggagcctcagccagcgctggggcctctgcccaatcaggaccaaacgga
ccatacggaccatacggaccacaaggcccagccggaccactcggaccacaaggatcagaa
gcttcagctaacgctgccgcctctgcccaacaaggaccaaacggaccacaaggatcagga
gcctcagccagcgctggcgcctcttcccaatcaggatcaaacggaccatacggaccatac
ggaccacaaggatcaggagcctcagccaccgctggcgcctcttcccaatcaggacaaaac
ggaccacaaggatcaggagcttcagctaacgctgccgcctctgcccaatcaggaccaaac
ggactatacggaccacaaggcccagccggaccacaaggaccactcggaccacaaggacca
ggagcttcagctaacgctgccgcctctgcccaatcaggaccaaacggactatacggacca
tacggaccacaaggcccagccggaccactcggaccacaaggatcaggagcttcagctaac
gctgccgcctctgcccaacaaggaccaaacggatcacaaggatcaggagcctcagccagc
gctggggcctctgcccaatcaggaccaaacggaccatacggaccatacggaccacaaggc
ccagccggaccactcggaccacaaggatcagaagcttcagctaacgctgccgcctctgcc
caacaaggaccaaacggaccacaaggatcaggagcctcagccagcgctggcgcctcttcc
caatcaggatcaaacggaccatacggcccatacggaccacaaggatcaggagcttcagct
aacgctgccgcctctgcccaacaaggaccaaacgggccacaaggatcaggagcctcagcc
agagctggcgcctctgcccaatcaggaccaaacggaccatacggaccatacggaccacaa
ggatcaggagcctcagccagcgctggcgcctcttcccaatcaggacaaaacggaccatac
ggaccacaaggcccagccggaccactcggaccacaaggatcaggagcttcagctaacgct
gccgcctctggccaacaaggaccaaacggaccacaaggaccaggagcctcagccagcgct
ggcgcctcttcccaatcaggacaaaacggaccatacggaccatacggaccacaaggccca
gccggaccactcggaccacaaggatcaggagcttcagctagcgctgccgcctctggccaa
caagtaccaaacggaccacaaggatcaggagcctcagccagcgctggcgcctcttcccaa
tcaggacaaaacggaccatacggaccatacggaccacaaggatcaggagcctcagccagc
gctggcgcctcttcccaatcaggacaaaacggaccacaaggatcaggagcttcagctaac
gctgccgcctctgcccaatcaggaccaaacggactatacggaccacaaggcccagccgga
ccacaaggaccactcggaccacaaggaccaggagcttcagctaacgctgccgcctctgcc
caatcaggaccaaacggactatacggaccatacggaccacaaggcccagccggaccactc
ggaccacaaggatcaggagcttcagctaacactgccgcctctgcccaacaaggaccaaac
ggatcacaaggatcaggagcctcagccagcgctggggcctctgcccaatcaggaccaaac
ggaccatacggaccatacggaccacaaggcccagccggaccactcggaccacaaggatca
gaagcttcagctaacgctgccgcctctgcccaacaaggaccaaacggaccacaaggatca
ggagcctcagccagcgctggcgcctcttcccaatcaggatcaaacggaccatacggacca
tacggaccacaaggatcaggagcctcagccagcgctggcgcctcttcccaatcaggacaa
aacggactatacggaccacaaggcccagccggaccacaaggaccactcggaccacaagga
ccaggagcttcagctaacgctgccgcctctgcccaatcaggaccaaacggactatacgga
ccatacggaccacaaggcccagccggaccactcggaccacaaggatcaggagcttcagct
aacgctgccgcctctgcccaacaaggaccaaacggatcacaaggatcaggagcctcagcc
agcgctggggcctctgcccaatcaggaccaaacggaccatacggaccatacggaccacaa
ggcccagccggaccactcggaccacaaggatcagaagcttcagctaacgctgccgcctct
gcccaacaaggaccaaacggaccacaaggatcaggagcctcagccagcgctggcgcctct
tcccaatcaggatcaaacggaccatacggaccatacggaccacaaggatcaggagcctca
gccagcgctggcgcctcttcccaatcaggacaaaacggaccacaaggatcaggagcttca
gctaacgctgccgcctctgcccaatcaggaccaaacggactatacggaccacaaggccca
gccggaccacaaggaccactcggaccacaaggaccaggagcttcagctaacgctgccgcc
tctgcccaatcaggaccaaacggactatacggaccatacggaccacaaggcccagccgga
ccactcggaccacaaggatcaggagcttcagctaacgctgccgcctctgcccaacaagga
ccaaacggatcacaaggatcaggagcctcagccagcgctggggcctctgcccaatcagga
ccaaacggaccatacggaccatacggaccacaaggcccagccggaccactcggaccacaa
ggatcagaagcttcagctaacgctgccgcctctgcccaacaaggaccaaacggaccacaa
ggatcaggagcctcagccagcgctggcgcctcttcccaatcaggatcaaacggaccatac
ggaccatacggaccacaaggatcaggagcctcagccagcgctggcgcctcttcccaatca
ggacaaaacggaccacaaggatcaggagcttcagctaacgctgccgcctctgcccaatca
ggaccaaacggactatacggaccatacggaccacaaggcccagccggaccactcggacca
caaggatcaggagcttcagctaacgctgccgcctctgcccaacaaggaccaaacggatca
caaggatcaggagcctcagccagcgctggggcctctgcccaatcaggaccaaacggacca
tacggaccatacggaccacaaggaagtccagtcatcatcatcgaggaagttccatcttct
gctagcgctactgccaacgccaacgctaacgctgtttcttacggaacagtggctccatac
ggatcatcagctaatgctggtgcctccgccgccgccggatcaggatacggatcaggatca
ggttccggtctgccatggttcggaggacgcaaggtttgccgtctttcacgcagacaattc
gtcgtcaagatcggcaccagacgccaaccatgccttacttgctag
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