Leguminivora glycinivorella (soybean pod borer): 125232627
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Entry
125232627 CDS
T09956
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125232627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgly03021
]
125232627
Enzymes [BR:
lgly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125232627
Transcription machinery [BR:
lgly03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
125232627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
125232627
NCBI-ProteinID:
XP_047994327
LinkDB
All DBs
Position
13:complement(21858294..21885503)
Genome browser
AA seq
1386 aa
AA seq
DB search
MPKEQYRETDVGRKISHVTFNVDSGSDIQQAAHIRVITKNLYAQDGQRVPAAYGVLDRRM
GTNQKNANCDTCGLGLAECVGHFGYIELALPVFHVGYFRSIITILQTICKECSKVMLQEN
IKKNFRRKFLNPELSYLHKKALRAAVLKKAKTCTKCPSCESLNGIVKKSSAGILKIIHDK
YRAKKPTDPIVQKVLKQFHEAKQSNKELATMIQSGLIIELSPLQVLNLFRRIPDEDIPLL
GMNAKISRPEDLILTRLPVPPLCIRPSVVSDIKAGTNEDDLTMKQSEILLINDVIARHIA
SGGKSELVQEDWDYLQLHAALYINSEMSGIPLSMQPKKPGRGLVQRLKGKQGRFRGNLSG
KRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLHWLRQLVRNGPDHHPGA
NYVQQRGLPHKKYLKYGNREKIAQELKCGDIVERHLVDGDVVLFNRQPSLHKLSIMCHKA
KVQPQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGNKSNLVTPRNGELL
IAATQDFITGGYLITQRDTFFTREEAQQLAACLLAGPDATMRIDMPPPAILKPRRLWTGK
QIFSLILKPNKRCEVKANLETKGKNYTSNKDMCVQDSYVIIRNSELICGSMDKSTLGSGT
KSSIFYILLRDWGEEHAVRGMWRLARMASYYMMNRGFSFGIIDVTPGRRLIEAKNRLLES
GYSKCDAYILEMEKGTLQCQPGCSMEETLEAVMLSELSSIRELAAKACFRELHPTNAPLI
MAQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDRSLPHFERHSKIPAARGFVENSFY
SGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLHYDMTVRNASGEVVQ
FKYGSDGLDPSYMEAKGQPVDLPRVLQDVRAQNLHRDEEPLDGDGIVVAAEETLALDDFK
TCTQEFKNELLTFLKTIANKVRSLRTKYAHCGSIVYQLERLTLTQLVKFIRVCHDKYQRS
IIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIINASRNISTPII
TAELVQPLDQEFARRVKGRLEKTTLGEITTYIEEVYLPNECFLLIRLDAERIRLLSLEVN
VDSVVYSICTSKLKVKPGNIEVVSDWAIKVIAEPSKLGGWLNMSLQQLARQLPTVVVKGL
PQVARCVIACDDTGGDVKYKLCVEGDGLRDVMATYGIDGRKTTSNNILEVYHTLGIEAAK
STIISEIQAVMAGHGMSVDRRHVELLAGQMTARGEVLGITRYGLARMKDSVLNLASFEKT
ADHLFDAAYYGQQDCISGVSESIILGVPCAIGTGVLQLLHSPAPEPPRTQRELLFDRPEY
HNSIWD
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagagcaatatcgcgaaacagacgtcggtagaaaaatatcacatgtcacgttc
aacgtagacagtgggtcggacatccagcaggcggcgcacatccgagtgatcaccaagaac
ctgtatgctcaggatggccagcgagtgccggctgcttacggagtgctggacaggaggatg
ggcacaaaccagaagaatgccaactgtgacacttgtggcctgggtctggcggagtgtgtc
ggccattttggctacattgagctggcactgcctgtcttccatgttggctacttccggtcc
atcattactatattgcagaccatctgtaaagaatgttcaaaagtaatgctccaagaaaat
ataaagaagaacttccgccgcaaattcctcaaccctgagctctcatacctacacaagaaa
gctctccgagcagcagttctaaagaaagccaagacctgcacaaaatgtccttcctgcgag
tccctgaacggcatagtcaagaagagttcagcggggattttgaagattatccatgataag
taccgtgcgaagaagccgacagacccgattgtgcagaaggtgttgaagcagttccatgag
gcgaagcagtcgaataaggagctagcgacgatgatacagagcgggctgattattgagctt
agccctttgcaggtgctgaacctattccgtcgcatccctgatgaagacatcccactccta
ggcatgaacgccaagatctcccgccctgaagacttgatcctgactcggttacccgtcccc
ccactgtgtatccgacccagtgtcgtctccgacatcaaggctggcacgaacgaagatgat
ctaacaatgaagcagtcagaaatcctcctcatcaatgacgtcatagctcgtcacatagcc
agcggcggcaaaagcgagctggtgcaggaagactgggactatctacagttgcatgccgcg
ctgtatattaatagcgagatgtctggcatcccgctctccatgcagcctaaaaaacccgga
cgcggtcttgtgcaacggctgaaaggcaaacagggcagattccgaggcaacttgtcgggg
aagcgtgtggatttctccagccggaccgtcatctctcccgaccctaatctacagattcag
gaggtgggcgtcccagtccacgtagccaagatcctcacctacccagagcgtgtgttcccg
gcgaacttgcactggctccggcagctcgtccgcaacggtcccgaccaccatcccggggca
aactacgtgcagcaacgagggttaccgcacaagaagtacctcaagtacggcaaccgggag
aagatcgcgcaagaactgaagtgcggcgacatagtggagcgacacctggtggacggcgat
gtagtgttattcaaccgacagccctcgctccacaaactgtccatcatgtgtcacaaggca
aaggtgcagccacagaggaccttcaggttcaacgagtgtgtatgtacgccttacaacgca
gatttcgacggcgatgagatgaacatgcatttgccgcagactgaagaggctagggccgaa
gcgcttattcttatggggaacaaatccaacctcgtaacccctcgaaacggcgaactccta
atcgcagcgacgcaagacttcatcaccggcggctatctcatcacccagcgagacaccttc
ttcacccgcgaggaggcgcaacagctagcggcctgcctactggccgggcctgatgctact
atgagaatagacatgcccccaccggctatactcaaacctaggaggttatggactggaaag
cagatattcagtttgatcctgaaacccaacaagcggtgcgaggtgaaggcgaacttagaa
acgaagggaaagaactacaccagcaacaaggatatgtgcgttcaagattcatatgtaata
atccgcaactctgagctgatctgcggctccatggataagagcacccttggttctggcacc
aagagcagcatcttctacattctgctcagagattggggcgaggagcacgctgttagaggc
atgtggagactagctcgcatggcgtcctactacatgatgaaccgcggcttcagtttcggc
attatcgacgtcacgcccggccgccgactcatcgaggccaagaaccgcctgctagagtcc
ggatactccaaatgcgacgcttacatcctggagatggagaagggaacgctgcagtgccaa
cctgggtgtagtatggaggagacgctggaagcagtaatgttgagcgagctcagtagtatc
agagaattggctgccaaagcgtgtttccgcgaattacatccaaccaacgcaccgcttatc
atggcacagagcggatctaaaggatcgaacatcaatatatcccagatgattgcctgcgtg
ggccagcaggctttgaacggcaagcgagtacctaacggctttgaagaccgctcgttacca
catttcgagaggcactcgaaaatcccggcggcccgtggcttcgtagagaacagcttctac
tccggccttacgcccacggagtttttcttccacacgatgggtggaagagaaggcctggtc
gacacggccgtaaagaccgctgagactgggtacttacagcgacgtttggttaagtctcta
gaagatctagtccttcactacgacatgacagtccggaatgcgtccggcgaagtggtccag
ttcaaatacggcagcgacggcctcgacccaagttacatggaggccaaggggcaacccgtc
gacttaccccgggtgctgcaagacgtccgggcacagaacttacacagggacgaggaaccg
ttggacggcgatggtattgtagtggcagcggaggagactttagctttggacgactttaaa
acatgcacacaggaattcaagaatgaactcttaacgttcctcaaaactatagccaataaa
gtccgttccctccgcacgaaatacgctcactgcggcagcatcgtgtaccaactagagaga
ctgactctcactcaactggtgaagttcatccgagtctgtcacgacaagtaccagaggagc
attattgagcctggcaccgccgtaggcgctcttgccgcacagagtatcggagagcctgga
actcagatgaccctaaaaaccttccactttgccggcgtcgcttccatgaacatcacccaa
ggcgtaccccgcgtcaaggaaatcatcaacgcttccagaaacatctcgactccaatcata
acagccgagttggtccaaccattggaccaggagtttgcgagaagggttaaaggaagacta
gaaaagacaacgttaggagagataacaacgtacatcgaagaggtgtatctacccaacgaa
tgtttcctgctcatccgactggacgcggagcgcatccgactgctgtcactcgaagttaac
gtcgactccgtcgtttattcaatatgcacatccaaattgaaagtgaaaccaggcaacata
gaagtggtgtcggactgggctatcaaggtcatagccgagccgagcaaactcggcggctgg
ctcaatatgtcgctccaacagctggcgcgacaactgcccactgtcgtcgtcaaggggctg
ccacaggtggcgagatgcgtgatagcttgcgacgacacaggtggcgatgtaaaatacaaa
ttgtgcgtggaaggcgacggtctaagagacgtaatggcgacatacggtatcgatggcagg
aagaccacttctaacaacatattggaggtgtaccacacgctaggcatcgaagcagccaag
tccacgatcatcagcgaaatccaagcggtcatggcgggacacggaatgagcgtggatcga
cgccatgtggaattactggctggtcagatgactgcgcgaggcgaggtgttggggatcacg
cgatatgggttagcgaggatgaaggattcagtgctcaatcttgctagtttcgagaagacc
gcagaccacctcttcgacgccgcatactacgggcagcaggactgcatcagcggcgtctcc
gagtccatcatcctgggcgtcccctgcgccatcggaactggtgtcttgcagctcctgcac
tcaccagctcctgaaccccctagaacacagagggagcttctgtttgatcgcccggagtat
cataattcaatctgggactag
DBGET
integrated database retrieval system
