Leguminivora glycinivorella (soybean pod borer): 125233661
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Entry
125233661 CDS
T09956
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125233661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgly03021
]
125233661
03036 Chromosome and associated proteins [BR:
lgly03036
]
125233661
Transcription machinery [BR:
lgly03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125233661
Chromosome and associated proteins [BR:
lgly03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125233661
PBAF complex
125233661
GBAF(ncBAF) complex
125233661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
BRCT_2
hNIFK_binding
Motif
Other DBs
NCBI-GeneID:
125233661
NCBI-ProteinID:
XP_047995690
LinkDB
All DBs
Position
1:complement(8313189..8352330)
Genome browser
AA seq
875 aa
AA seq
DB search
MANIGPKKDGGPNVEYFQSPESLAQFDQIRVWLQKNCKKHVQTDPPTKEGLAQLVIQLIQ
YQENKLGKNAADPPFLRLPMKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPS
RKDLNVQMMMEIESSLLGAEVVRSPSVFIRPDVDKATANKVKDIVVNRQGEICDDEEDAT
HIIYPNVDPVEEEYARPVFRRGSHVLVHWYYLPDSHDTWAQADLPVDVPETANWECTRSE
PWRVTAAWVLDLPQYNEWMNEEDYEVDAAGKKKVHKLRLSVEELMPGGESSSKSKKGKRK
RSPSPPPQKLAKRKSRVTKKRDNDADDEDDAASRDNTDVAPAPEPERPPEREAPAPEPAA
SATSSGGGARARRHGARHARARHGRARRLAGQAQRLQHAVADFGGHMVNFVHIALRRNFM
IDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHGFLEQWGLINYQLEAESRPTAMGPPPTS
HFHVLSDTPSGLQPLNRAALPRPVETAAVPKTEAGLPNGVDTTAPAAAVKAENLLEVGGA
PGLKLDQYRGGARGREWTEQETLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPI
EEPYVQDGASGGVLGPLAYQPIPFSKQGNPVMSTVAFLASVVDPRIASKATGAAMAEFAA
IKDEVPAAMMEAHVKAAEAHGPAAALAATGIAGTAPDLPLPPATEKKEGGAEVKTEAMEV
EEGEVKPKEEPADTPAPDEPKDTKETPPAATESSTPSTVDAKVQSAAAAALAAAAVKAKH
LAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFH
LEQLKAAEFRARHQAHQRYVRLALFFVLIIKQKLN
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggctaatattggccccaagaaagacggcgggcccaacgtagaatatttccaatcaccg
gaatcgctagctcaattcgatcaaattcgtgtttggttgcagaaaaattgcaaaaagcat
gtccaaacagatcctccaacaaaggagggcctggctcaactggtcatccagctcatccag
taccaggagaacaagttggggaagaatgctgctgatccaccatttttgaggcttccaatg
aaagtgttcatggacatgaagcccggcggctcgctgtgcacggtgctcgccaccatgttc
cgtttcaagtcggagcagcggtggcgcaagttcgacttccaggtcggtaagaacccgtcg
cgcaaggacctgaacgtgcagatgatgatggagatcgagtcgtcgctgctgggcgcggag
gtggtgcgctcgcccagcgttttcatccgccccgacgtcgacaaggccaccgccaacaag
gtcaaggacatcgtcgttaaccggcagggggagatttgcgacgacgaagaggatgcgacg
cacatcatctacccgaacgtggaccccgtggaggaggagtacgcgcggccggtgttccgg
cgcgggtcgcacgtgctcgtgcactggtactacctgcccgacagccacgacacctgggcg
caggccgacttgccggttgatgtaccggagacggccaactgggagtgcacgcgcagcgag
ccgtggcgcgtgaccgcggcgtgggtgctggacctgccgcagtacaacgagtggatgaac
gaggaggactacgaggtggacgcggcgggcaagaagaaggtgcacaagctccgtttgtcg
gtggaggagctgatgccgggcggcgagtcgtccagcaagagcaagaagggcaagcgcaag
cgctcgccctcgccgccgcctcagaaacttgccaagaggaagagccgcgtgactaagaag
cgcgacaacgacgcggacgacgaggacgacgcagcgtcgcgcgacaacaccgacgtggcg
cccgcgcccgagcccgagcgcccgcccgagagagaagccccggccccggagcccgcggcg
tcggcgacgagcagcggcggcggagcccgcgcccgccgacacggcgcccgccacgcccgc
gcccgtcatggacgcgcacgacgactcgcagggcaagcacagcgactccaacacgcagtc
gcagactttggtggacacatggttaattttgtacatatcgcgttgcgcaggaacttcatg
atcgacacgtaccggctgaaccccacggagtacctgacgagcacggcgtcgcggcgcaac
ctcgccggcgacgtgtgcgccatcatgcgtgtgcacggcttcctggagcagtgggggctc
atcaactaccagttggaggcggaatctcggccgacggccatgggcccgccgcccacgtcg
cacttccacgtgctctccgacacgccgtccggcctgcagccgctcaaccgcgccgcctta
ccgagaccagtggagacagcagcggtgccgaagacggaggcgggcctgccgaacggcgtg
gacacgacggccccggcggccgccgtcaaggccgagaacctgctcgaggtgggcggcgcg
cccggactcaagctcgaccagtaccgcggcggagcacgcggccgcgagtggacggagcag
gagacgctgctgctgctggaggggctggagctgcaccgcgacgactggaaccgcgtggcg
gcgcacgtgggcacgcgcacgcacgacgagtgcatcctgcacttcctgcgcctgcccatc
gaggagccctacgtgcaggacggcgcctccggtggcgtgctaggcccgttggcgtaccaa
ccgatccctttcagcaagcagggcaaccccgtgatgagcaccgtggccttcctcgcgtcc
gtggtcgacccgcgcatcgcttccaaagctaccggagccgccatggcagagtttgccgcc
atcaaggacgaggtgccggcggcgatgatggaggcgcacgtgaaggcggcggaggcgcac
gggccggccgcggcgctggccgccaccggcatcgccggcaccgcgcccgacctgcccctg
ccgcccgccaccgaaaagaaggaaggcggcgccgaagtaaaaacggaggcgatggaggtg
gaggaaggcgaggtgaagcccaaggaggagcccgccgacacgcccgcgcccgacgaaccc
aaggacaccaaggaaacgccgcccgccgccacagaaagttcgacaccgtcaacagtggac
gcgaaagtgcagtccgcagccgcggccgcgctggccgccgccgccgtcaaggccaagcat
ctcgccggcgtcgaggagcgcaagatcaagtcgcttgtggcgctgctggtcgagacacag
atgaagaaactggagattaaactgagacacttcgaggagctcgaggctactatggagcgc
gagcgtgaggggttagaataccagcgacagcagctcatccaggagcggcagcagttccac
ctggagcagctgaaggccgcggagttccgcgccaggcaccaggcgcaccagaggtacgtt
cggctcgctttattctttgttctcattattaagcagaagctcaactga
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