Leguminivora glycinivorella (soybean pod borer): 125233758
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Entry
125233758 CDS
T09956
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03013
Nucleocytoplasmic transport
lgly03015
mRNA surveillance pathway
lgly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125233758
09122 Translation
03013 Nucleocytoplasmic transport
125233758
03015 mRNA surveillance pathway
125233758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125233758
03041 Spliceosome [BR:
lgly03041
]
125233758
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
125233758
Spliceosome [BR:
lgly03041
]
Common components
Common spliceosomal components
Cap binding complex
125233758
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
DnaG_helical
Fib_alpha
Kazrin
DUF4611
AATF-Che1
Motif
Other DBs
NCBI-GeneID:
125233758
NCBI-ProteinID:
XP_047995791
LinkDB
All DBs
Position
15:1449174..1493295
Genome browser
AA seq
801 aa
AA seq
DB search
MNRRRGHGDEDADGYDRLHRKRRRVSENQEIEDRLESLILRVGEKSSSSLESNLEGLASV
LEADLNTFRVKILRILTECAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENL
KAGKWNAARYCLRFISDLVNCHVLAASSLLTLLETLVDCANEDGVPQVRRDWFVFAVLSA
LPWVGRELYEKKESQLDHLLVTIEVFLNKRSKKHWPALKVWSADSPHLQEEYLDCLWAQI
KKLRQDNWSEKHIPRPYLAFDSILCEALQHTLPTIQPPPHNDGDSYPMPRVVFRMFDYTD
CPDGPXAPGAHSIERFLIEEHLHNIIEAYHLERKECAAQLLCFPYKGKIPLEYCIVEVIF
AELFNLPRPRYLEICYGSILIELCKLQPSTMPQVLAQATEILFLRIDTMNVACFDRFAYW
FAYHLSNFQYRWSWDDWEACTQLEPDHPKPRFVKEVLEKCLRLSYQQRLKDMMPEAFASF
VPLKPEPIYKYSMEGAASLPGTEAAHQLVVCVRNKCTPEEALNVLRELPNPLREGDQPSA
AQAAPHNPLKIDVFVRTLLNLGSKSISHSFAAISKFHYVFKILAESEEAQICILRNVWEL
WQRHPQMVCVLVDKMLKTQIVECSAVATWLFSKEMAPYFTGAQLWEILHLTIDKMNKHVS
KLSRELQEARAELARADSSSSDSEDEGTSKKKKDQDKPTEEAVERMEERLEAAHMDQKRL
FLIVFQRFIMILSEHLVRCDTDARDPNTGWYRSTVGRLRQVFLAHHEQVQKYSSTLETLL
FTQDLDPHILDVFHQFLALTA
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtagaaggggccacggagatgaagatgcggacggttacgatcgtcttcaccgt
aaaagacgtcgtgtatcagaaaaccaggagatagaggatagattagagtcccttattttg
agggttggagagaaaagcagctctagtttagagagtaatctcgaaggtttggcaagcgta
cttgaagctgatttgaatacgttccgcgtgaaaatccttcgtatcctgacggaatgcgct
attcgtatgccagagaagtgcactatctacgctacgctcgttggtctccttaatgcgaag
aactataactttggcggtgaatttgtagactacatagttaagacgtttaaagaaaacttg
aaagctggtaaatggaacgcggctagatactgtctaaggttcatatctgacttggtcaac
tgtcacgtgttggctgcatcatcactacttactttattggagacattagtagactgtgct
aatgaggatggcgtaccgcaagttcgtagagactggtttgtgttcgctgttctttccgct
ttgccttgggtgggtcgggagctttatgaaaagaaagagtctcagttggaccatctactt
gttaccattgaagtattcttgaacaagagaagtaagaaacattggccagcccttaaagta
tggtcagcagattcaccgcatttacaagaagagtatctggactgcctctgggcacaaatt
aagaagttgaggcaggacaactggtcggagaagcacattcctcgcccataccttgccttt
gattctattttgtgtgaagccttgcagcacacactgccaaccattcagccgccaccccac
aacgatggcgactcctacccaatgccgcgcgtagtcttccgcatgttcgactacaccgac
tgccccgacggcccgnntgctcccggagctcactccatcgaacgcttcctcatcgaagaa
cacctccacaacatcattgaagcgtaccatttagaacgcaaagaatgcgccgctcaacta
ctctgtttcccatataagggtaaaatacccttagagtattgtattgttgaagttatattc
gctgaactgttcaacctgcctcggccgaggtatttggagatatgctacgggtcgattttg
attgagctgtgtaagctgcagccgtcaacgatgccgcaggtgctggcgcaggcgactgag
atactgttcttgaggattgacactatgaatgtggcttgctttgacagattcgcatactgg
tttgcataccacctgagcaacttccaataccgctggtcgtgggacgactgggaggcgtgc
acacagctcgagcccgatcacccgaagccgcgcttcgtcaaggaagtgctcgagaagtgt
ctgaggttgtcataccagcagcggctgaaagacatgatgcccgaagcgttcgcgtccttc
gtcccgctcaagccagaacccatctacaaatactccatggagggagctgcatccctcccc
ggcaccgaagcagcccaccagctagtggtctgcgtccgcaacaaatgcacccctgaagaa
gccctgaacgtcctccgggagctccccaaccccctccgcgagggcgaccagccctcagca
gctcaggccgctccacacaacccgttaaagatcgatgtatttgtgcggaccctgctcaat
ttgggcagcaagagcatttcacacagttttgctgctatttccaagttccattatgttttt
aagatcctcgctgaatccgaagaggcccaaatctgcatcctccgcaacgtttgggagctc
tggcaacgccatccccaaatggtctgcgtcctcgtagacaagatgctaaagacgcaaatc
gttgaatgcagcgccgtggctacgtggctcttctccaaagagatggctccttacttcacc
ggcgcgcagttgtgggagatccttcatctcactattgacaagatgaacaagcacgtctcc
aaactgagccgggaactgcaagaagctcgcgcggaactcgcgagggctgactcctcaagc
tccgactctgaagacgagggcaccagcaaaaagaagaaagatcaggacaagcccactgag
gaggcggtcgagcgcatggaagagcgtctagaagcggcgcacatggaccaaaaacgtttg
ttcctgatcgtgttccagcgattcatcatgatcttatccgagcatttagttcggtgcgat
acagacgctcgagaccccaatacaggctggtatagaagcaccgtcggccgtcttcgacag
gtgttcctcgctcaccacgagcaagtccagaagtacagcagcacgctggagaccctgctg
ttcacgcaggacctcgacccgcacatcctcgacgtgttccaccagttcctcgctctcacc
gcttag
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