Leguminivora glycinivorella (soybean pod borer): 125234671
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Entry
125234671 CDS
T09956
Name
(RefSeq) translation initiation factor IF-2 isoform X1
KO
K12615
enhancer of mRNA-decapping protein 3
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125234671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125234671
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125234671
mRNA degradation factors
5'-3' decay
Decapping complex
125234671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM14
FDF
Motif
Other DBs
NCBI-GeneID:
125234671
NCBI-ProteinID:
XP_047996967
EnsemblRapid:
ENSLGLG00000005149
LinkDB
All DBs
Position
16:complement(21827461..21837150)
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AA seq
528 aa
AA seq
DB search
MAQWVGFGVSVRCGSPLGCYQGTILAADGASITLTKPFRNGFPYPKAQVTLKASDIKSLE
IISGKTSGGTAHSTVPVAGKKRVPRATVGESLQEQAPAPPPPPPVANKGKPARSKPIDIQ
AKNRSNTHAGSYGAGASGSTPKAGGRAAGGDKARRRNEACFGSAALEAVDDDFDFEGNLA
LFDKEVFVCYVGAVATDASRRGARGGGARGAGGGGGRGRGGGRRQAAPRPERAARRPARH
RARRRAARAAGRPRLRHRLRHPPAQRVRRAARPPVGRAAPHGRRDAARGAGAVRARRRRR
GLETRRRDAQTGPAQRAPAALRGRGGGQRAGRRRRRGRGARAARARRRHLRRAARRHVSA
SDERADRVPPERGPRARGHGASPRGGPAAARAARPGDLDAAPEHSPRAGVGVLVARRAGG
GGAGRRGERGERAVGGRAGGGARRAGRAAAPRTPGPRAAPAAGQRGAARAAVRGGRRRLQ
VALRRRLRAAAASRRRRRLSRSTGRFVVRVGGSSSCVRLAYEIKCLSV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtgggtaggtttcggcgtgtcggtgcgctgcgggtccccgctgggctgctac
cagggcaccatcctggcggcggacggcgcctccatcacgctcaccaaaccgttccggaat
ggattcccttatcccaaagctcaggttacgctgaaagcatcagatataaaatccctggag
attatctccggcaagacgtcaggtggcacggcccacagcacagtgccagtcgcgggcaag
aagcgagtgccccgggcaacggtcggagagagcctgcaggagcaggcgccggcgcctccg
cctccgccgcccgtggccaacaagggcaagccggcgaggagcaagcctattgacattcag
gctaagaacaggagcaacactcacgctggaagctacggcgccggcgcctccgggtcgacg
cccaaggccggcgggcgcgcggcgggcggcgacaaggcgcgccgccgcaacgaggcctgc
ttcggctcggccgcgctcgaagccgtcgacgatgacttcgacttcgagggcaacttggca
ctttttgataaagaggtgttcgtttgttatgtaggcgctgtggcaacagatgcgtcccga
cgtggtgcgcgtggcggcggcgcgcgaggagctggcggcggcggcgggcgcgggcgcggg
ggagggcggaggcaagctgcgccacgaccagaacgtgctgcgcggcgccccgcccgacac
cgcgcccgtcgccgtgccgcccgcgctgcggggcgtccgcgactacgtcaccgactccgg
cacccgcctgcccagcgtgtgcgccgcgctgcgcgcccgcctgtgggccgcgctgcgccg
cacggacgacgagacgcagcacgcggcgcgggcgctgtacgcgcgcgccgccgccgacgt
ggccttgaaactcgtcggcgggacgcgcagactggacccgcgcaacgcgcaccagcggcc
ttgcgcgggcgtggcggcgggcagcgggccggccgccgccgccgccgtggccgcggcgcg
cgtgctgcgcgcgcacggcgtcgacacctacgtcgtgccgctcgacgacacgtgtccgct
agtgacgagcgcgctgaccgcgtaccgcctgagcgggggccgcgtgctcgcggccacgga
gcctcgccccgcggcggacctgctgctgctcgcgctgcacgacccggagacctcgacgca
gcacccgagcactcccctcgtgctggcgtgggcgtgctcgtcgcgcggcgcgctggtggt
ggtggagccgggcggcggggagagcgaggagagcgggcagtgggagggcgtgctggtggc
ggcgcgcgccgcgctggccgcgctgctgccccccgcactcccggcccccgcgccgcgcct
gctgctggccaacgtggcgccgcccgcgcagctgttcgcggcggccggcgtcgcctacag
gtcgcccttcggcgccgcctccgtgctgccgctgcatctcgccgacgacgacgactgagc
cgctccacgggacgcttcgtcgtgcgggtcggaggaagctcatcttgtgtgcgtctcgct
tacgaaataaaatgtttatccgtttag
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