Leguminivora glycinivorella (soybean pod borer): 125236307
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Entry
125236307 CDS
T09956
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125236307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125236307
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125236307
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANAPC3
TPR_19
TPR_2
TPR_14
ANAPC8
TPR_16
ALKL1_2
Motif
Other DBs
NCBI-GeneID:
125236307
NCBI-ProteinID:
XP_047999013
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All DBs
Position
19:2647501..2649374
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AA seq
564 aa
AA seq
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MSNPKDREEPVVLARQCYMNKDYSSALQHLNELESLAGANNKRIQHNKAVVEFMAGDMRN
VDKFKKAITQITGVTFPEVDSKESSAFALYNYAVILYHSRYYYQCAVVLERLLNSKNVKD
TKLHQQIVLLMMEATLCRRTFNKTLDVANNHAELMKSDSDINNMFERLVSRAKLLLGQKI
KLTLTADSIENIFVIAQQHYINGDMKEAANTLGQYKTLKYNYDLKTQGEDIWAAINNNLG
VIYMSVKKPFLASKYFQHAVKEHFRAMESDDSERLIACKDRPLYVYNLGLALLAANNSEG
AFECLVETARHYPNNPRIWLHLAECCIKKCCSDEAQQFAVKKLGSGSHTRILFTKDVKEK
YSTSGESFAIPTLSLEFAALCLRNAITLLPDQEPTIDATLPVVQAPPGPPISWKQCCEVK
NSVLVLQSYVLLHMQDPLSALMSATELLNQPDVSNSHKAWAHIYAAEALINLDRITDAVE
HLNPQMIHELVSVLPYQMRDMIAVSVWAKAAVCHILRGDLVTARKILLQINSPRVLPLQM
YLEICTGNIENCHTTLRKLRSLSQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacccaaaagaccgcgaagagcctgtcgtgctcgcccgccagtgctacatgaac
aaggattactcatcggctctccagcacctaaatgaactagaatctctggctggcgccaac
aataagaggattcagcacaacaaagccgtcgtcgagttcatggctggcgatatgaggaac
gtggacaagttcaagaaggccatcacgcaaattacgggggttacttttccagaagttgac
tcaaaagagtcatctgccttcgcgttgtacaactacgccgtcattttgtaccattcacgc
tactactaccaatgcgctgtagtgttagagaggctactcaactcaaaaaacgttaaagac
actaaactgcaccaacagattgtactacttatgatggaagctacactttgccgcagaaca
ttcaacaagaccttggatgtagccaacaatcatgctgaattaatgaagtcagatagtgac
attaacaatatgtttgaaagactggttagcagagcaaaacttctacttggacagaaaata
aaactaactttaactgcagactcaattgagaatatttttgtaattgctcaacagcattat
attaatggagacatgaaggaagctgcaaatactttaggacagtacaagacacttaaatat
aactatgacttgaaaactcagggtgaagacatctgggcagctattaataataacctcgga
gttatttacatgtcagtgaagaagccgtttttggcatcaaagtattttcaacatgctgtt
aaagaacactttagagccatggagagtgatgacagtgagcgtctcatagcctgcaaggat
agaccgctgtatgtttacaacttaggtctggcattactggcagcaaacaactcggaagga
gcatttgagtgtttggtggaaacagcccgccactaccctaacaaccctcgaatatggctc
catctagccgaatgctgcatcaaaaaatgctgcagtgatgaagctcagcaattcgcagtc
aaaaagctaggcagcggctcacataccaggatcctcttcacaaaagatgtaaaagaaaaa
tactcaaccagtggagagtcatttgctatacccacattatctttagaatttgcagctctc
tgcttaagaaatgctataactttactgccagaccaagaacctacaatagatgcaacactg
ccagtagtacaagctcctccaggaccaccgattagctggaagcagtgctgcgaagtcaag
aattctgtgctagttttacagagttatgtattactgcacatgcaagatccactctcagcc
ttgatgagtgctacagagctcctgaaccaaccagatgtctctaacagccataaagcctgg
gcccacatttacgcagccgaagctctcatcaacttagacagaataacagatgcagtggag
catctgaatccacaaatgatccacgaactagtgtccgtcctcccataccagatgagggac
atgatagcagtctccgtgtgggccaaggcagcagtttgccacattttacgaggagatctg
gtcacagctaggaagattttactacaaataaactctcctagagttttacccctgcaaatg
tacttagaaatatgtactggtaatatagaaaactgtcacacaactttgcgaaagttgaga
agtttatcacaatga
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