Leguminivora glycinivorella (soybean pod borer): 125236554
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Entry
125236554 CDS
T09956
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgly03041
]
125236554
03009 Ribosome biogenesis [BR:
lgly03009
]
125236554
Enzymes [BR:
lgly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125236554
Spliceosome [BR:
lgly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125236554
Ribosome biogenesis [BR:
lgly03009
]
Eukaryotic type
90S particles
Helicases
125236554
Pre-60S particles
125236554
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
AAA_30
FAM60A
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
125236554
NCBI-ProteinID:
XP_047999355
LinkDB
All DBs
Position
2:11751988..11768535
Genome browser
AA seq
618 aa
AA seq
DB search
MPTPDKILLRKIKKREKNKLKLAEKKSSVPETTSEPEPIKDLKKRPHENNVPENITKKKK
KKKKVQQEPVEVKEETTENDSDNNDGNESDDNDEKETIEKKPDPDSSQLPGSSLCLGILS
TQSFSALEDKVCEATLMGVKDMGFTTMTEIQAKAIPPLLEGRDLVGAARTGSGKTLAFLI
PAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGGANRSTEA
QKLSKGINILVATPGRLLDHLQNTPDFLYKNLQCLVIDEADRILEIGFEEEVKQIIKLLP
KRRQTMLFSATQTKKTEALTALAVKHEPAYVGVDDHREQATVDGLEQGYIVCPSEKRMMV
LFTFLKKNRKKKVMVFLSTCMSVKYHHELFNYIDLPVMSIHGKQQQSKRTTTFFQFCNAE
SGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGLGTSGHALLFLRPEEL
GFLRFLKQSKVTLNEFEFSWNKVADIQLQLEKLISRNYFLNQSAKEAFKSYLRAYDSHHL
KTIFDIDTIDMAKVSKSFGFTVPPAVELKVEKKGPPTKRKGGGGYGYFKSLNAPMSQKNK
AEKTKIYRQKGGNKRPVS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgcccgacaaaattcttctcaggaaaattaagaaacgcgaaaaaaataaatta
aagctagccgagaaaaagtcaagcgtgccagagacaacatctgagccagagccaattaaa
gatttaaagaaacggccacatgaaaacaatgtccctgaaaacataacaaaaaaaaaaaag
aagaagaagaaggtacaacaagaaccagtggaagtgaaagaagaaaccacggaaaatgat
tcggacaataatgatggaaatgagagtgatgataatgatgagaaggaaacaattgagaaa
aagccagacccagattcaagccaacttccaggatccagcttatgcctcggtattttatct
actcaaagcttctctgcattggaggacaaagtttgtgaagcaacactcatgggtgtaaaa
gatatgggtttcacaactatgacagagattcaagctaaagccataccgcctctgctcgaa
ggcagggaccttgtgggagcagccaggacaggctctggaaagactttggcttttctaata
ccagctattgaccttatttataagctgaaattcaagccaagaaatggcacaggagtcata
attctgtcaccaacaagagagttgtctatgcaaacttttggagtattgatggagttaatg
aagtatcaccaccacacctacgggttggttatgggtggtgctaacagaagtacagaagct
caaaagttgtctaaaggtattaacattctggtagccaccccagggagactgctggatcat
ttgcagaatactccagacttcctgtacaaaaatctgcagtgcctagttattgatgaagct
gacaggatattggagattggatttgaagaagaagtgaaacaaatcataaaattattaccc
aaacgccgacagactatgctgttcagtgctacgcagaccaagaagacggaggcattgaca
gctctggctgtcaaacacgagcctgcctatgtgggagttgatgaccacagggagcaagcc
actgttgatggtttggaacaaggttacatagtatgcccgtcagaaaagcgcatgatggtc
ctattcacattcctgaaaaagaaccgaaagaagaaggtgatggtgttcctgtccacctgc
atgtccgtgaagtaccaccatgaactgttcaactacatcgatctgcccgtcatgtctata
catggtaaacaacagcagtcgaagcgaaccacaaccttcttccagttctgtaacgccgaa
agcggtatcctgctctgcacggacgtggcggccagagggctggacatcccggctgtcgat
tggattgtccagtatgacccacctgatgatcctaaggaatacatccaccgcgtgggcaga
acagcgcgcggtctcggcaccagtggacacgcgctactcttcctgcggccggaggagctc
ggtttcctgcgcttcctgaagcagtccaaggtcacgctcaacgagttcgagttctcgtgg
aacaaggtggccgatattcagctccagctggaaaaactgatatcaagaaattacttccta
aatcagtccgccaaggaagcattcaagagctatttgagggcgtatgactcgcaccatctg
aagactatattcgacatagacactattgatatggctaaagtctcaaaatcgttcggtttc
accgtaccgcccgcagttgagctcaaagttgagaagaaagggcctccgacgaagcgcaag
ggaggaggcgggtatggatatttcaaatcactgaatgctccgatgagccagaagaataag
gcagagaaaacaaagatctaccgacagaaaggcggtaataagagaccagtgagctga
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