Leguminivora glycinivorella (soybean pod borer): 125236564
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Entry
125236564 CDS
T09956
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgly03041
]
125236564
03009 Ribosome biogenesis [BR:
lgly03009
]
125236564
Enzymes [BR:
lgly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125236564
Spliceosome [BR:
lgly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125236564
Ribosome biogenesis [BR:
lgly03009
]
Eukaryotic type
90S particles
Helicases
125236564
Pre-60S particles
125236564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
CMS1
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
125236564
NCBI-ProteinID:
XP_047999368
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All DBs
Position
2:complement(11768602..11781361)
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AA seq
469 aa
AA seq
DB search
MEVEDIIKGSSFSMLKGKLSDQLLKNLSLMGHAKPTRIQAESLPCILLAKDIIGTAKTGS
GKTLAFLIPVIERLINLGFSTKHGTGCIILTPTRELALQIHHVLKKLLLNINLTCSLIVG
GEKKAKDLLVLKKGVNIVVSTPGRLFDHLQNTECFNVKNLKCLVVDEADKLLEAGFEKHI
TGIVKLLPRNRQTLLFSATLDSNVKNLARLALREDPVIISTSDQSQSTVTGLKQGYYITP
VEQKLSWLYKMLRKSKKLKVMVFFSSCKSVDFHYEFFRNHCKASVLSIHGRQSQARRKEA
YQNFVEASSGALFCTDVAARGLDIPSVDWIVQYDPPTDPKEYIHRVGRTARGLNNTGNAV
ILLRPEEEEFIRFLKTEKVYLDKYSFEDPSDDIQRMLEDLILKNGVMKLLARKAYLSFLR
CYKAHPLKNIFNTDTLDINLAAKAFGFLETPHNDFLKKPKKKSKKNTTS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgaagatattatcaagggttcgagtttttcaatgttaaaaggcaaacttagt
gaccaattgttaaaaaatttaagccttatgggacatgcaaagccaactcgaattcaagcg
gaatctctcccgtgtattttattagcaaaggatattattggcacagcaaaaactggaagt
ggtaaaaccctagctttcttaatacctgtgattgaaagattaattaatttaggattctcc
accaaacatggcacaggctgcattatcttaacaccaaccagggaattagcactgcaaata
catcatgtattgaagaaattgcttctgaatatcaacctaacatgttccttaattgtcggg
ggagagaaaaaagctaaagatttattagttttgaaaaaaggagttaacatagttgtgagc
actcctgggcgtctatttgaccatctacaaaatacggaatgttttaatgtaaagaatttg
aaatgcctagtggtagatgaggctgacaaactgctagaagctggcttcgaaaaacacatc
actgggatagttaagctgcttccaagaaataggcaaactttactattcagtgctactctg
gacagcaatgtgaagaatctagcaaggttagcactaagggaagatccagtcataatatca
acaagtgaccaatcacagtccactgtcactggactaaagcaagggtattacataactcct
gtagaacagaagctctcttggctgtacaaaatgctacgaaaaagcaagaagttgaaggtc
atggtgttcttttcatcatgcaagtcagtagacttccattacgaattctttaggaatcat
tgtaaagcatcagttttaagtatacatggccgacaaagccaagccagaaggaaggaagca
taccaaaactttgttgaagcttcgagcggagccctattttgcactgacgtggcggccaga
ggattggatataccgagcgtcgattggatagtacagtatgaccctcctacggatcctaag
gaatatattcacagggttggccggacagcgagaggcctaaataacaccggaaatgctgta
atactattaaggccagaggaagaagaattcatacgctttttaaaaactgaaaaagtatac
ttagataaatacagttttgaggacccgtccgatgatattcagagaatgcttgaagatttg
atactcaagaatggcgtaatgaaactcttggcaagaaaggcatatctatctttcctgagg
tgttacaaagctcatccactgaagaacattttcaacaccgatacgttggatatcaactta
gctgccaaagcctttggatttttggaaacaccacataacgactttttaaagaaaccaaag
aagaaatccaagaagaatacaacttcatga
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