KEGG   Leguminivora glycinivorella (soybean pod borer): 125236633
Entry
125236633         CDS       T09956                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
lgly  Leguminivora glycinivorella (soybean pod borer)
Brite
KEGG Orthology (KO) [BR:lgly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lgly03041]
    125236633
Spliceosome [BR:lgly03041]
 Complex B
  Other components
   Complex B specific factors
    125236633
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_2nd LisH_TPL Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd NBCH_WD40 WDR90_beta-prop_4th Beta-prop_VPS8 Ge1_WD40 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_HPS5 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_SCAP WDR54 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N DUF7165 LisH_WDR26 LisH_PAC1 Dimer_MINDY4_N zf_topless KNTC1_N
Other DBs
NCBI-GeneID: 125236633
NCBI-ProteinID: XP_047999472
LinkDB
Position
2:complement(253714..260851)
AA seq 521 aa
MSIEIESADVIRLIQQYLKESNLTRTLQTLQEETGVSLNTVESVDGFCADINSGHWDAVL
GCVAALKLPERKLVELYEQVVLELIELRELGAARQLLRNSHPCRLMKQHHTDRYIHLENL
LSRSYFDPREAYGAGGGKERRRAAIAASLAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAIRDEEDDQCPTQLFKTIKFGQKSHVECARFSPDGQYLVTGSVDGLVEV
WNFTTGKIRKDLRYQAQEEYMSMEEAVLSLAFARDSDTLAAGANDGRVKIWRVSTGAVQR
RLERAHSRGVTSLQFSRDSSQLLSASFDRTVRIHGLKSGKLLKEFRGHTSFVNEAVFTPD
GHGVLSGSSDGSVKLWALRTGECSATLKPLGAAGEAAGAGAAEPPVNTLLLTPKNPEHFV
VCNRTNTVVIMNTAGQTVRSFSSGRREREGGSLTCAALSARGRLVYCAGEDLVLYAFCAN
TGKLERTINIHEKAVIGMTHHPHQNLLATYSEDGLLKLWKP
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgtctatcgaaatagaatccgcggacgtgatccggttgatccaacagtatctgaaggaa
tcgaatctcacgcgtacgcttcagactttgcaggaagaaacaggtgtatccctaaacaca
gtggagagtgtggatggcttctgcgcagacatcaacagcggccactgggacgcagtgctg
ggctgtgtggccgcactcaagctgcccgagcgcaagctggtggagctctatgaacaggtg
gtcctagagctgatcgagctgcgagagctgggcgcggcgcggcagctgctgcgcaactcg
cacccgtgccgactcatgaagcaacaccacaccgatcgctacatacacttagagaacctt
ctatcccgttcgtacttcgatccccgagaggcgtacggcgcaggcggcggcaaggagcgg
cggcgcgccgccatcgccgcgtcgctggccggggaggtgtccgtggtgccgtcctcgcgc
ctgctggcgctgctggggcaggcgctcaagtggcagcagcaccaggggctgctcccgcca
ggcacaaccatcgacttgttccgaggcaaggcggccatccgagacgaggaggacgaccag
tgccccacgcagctgttcaagaccatcaagttcgggcagaagtcgcacgtggagtgcgcg
cgcttctcccccgacggccagtacctcgtcaccggctccgtggacggcctggtcgaggtg
tggaacttcacaacgggcaagatccgcaaggacctgcgctaccaggcgcaggaggagtac
atgagcatggaggaggcggtgctgagcctggccttcgcgcgcgactcggacacgctggcc
gccggcgccaacgacggccgcgtcaagatatggcgcgtgtcaacgggcgcggtgcagcgg
cggctggagcgcgcgcactcgcgcggcgtgacgtcactgcagttcagcagggactcctcg
caactgctctcggcctccttcgaccgcactgtccgcatccacggccttaagtccggcaag
ttgcttaaggagttccgcggacacacgtcatttgtcaacgaggcggtgttcacgccggac
gggcacggcgtgctgtcgggcagcagcgacggctcggtgaagctgtgggcgctgcgcacg
ggcgagtgctcggccacgctgaagccgctgggcgccgcgggcgaggccgccggcgccggc
gccgccgagccgcccgtcaacacgctgctgctcacgcccaagaaccccgagcacttcgtc
gtctgcaaccgcaccaacactgtggtgataatgaacacggcggggcagacggtgcggtcg
ttctcgtcggggcggcgcgagcgcgagggcggctcgctcacgtgcgccgcgctctccgcc
agggggcgcctcgtgtactgcgccggcgaggacctcgtgctctacgccttctgcgccaac
accggcaagctggagcgcaccatcaacatccacgagaaggcggtgatcggcatgacgcac
cacccgcaccagaacctgctggccacctacagcgaggacggcctgctcaagctctggaag
ccctga

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