Leguminivora glycinivorella (soybean pod borer): 125236921
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Entry
125236921 CDS
T09956
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgly03041
]
125236921
Enzymes [BR:
lgly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125236921
Spliceosome [BR:
lgly03041
]
Complex C
Other components
Complex C specific factors
125236921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_5
AAA_19
AAA
AAA_7
nSTAND3
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
125236921
NCBI-ProteinID:
XP_047999795
LinkDB
All DBs
Position
20:15419397..15551896
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AA seq
723 aa
AA seq
DB search
MSGRPRFIKPGNDPLYPARNKDGGIEILINENTDSALTTDSDAKTNFVYNRYHHLPLTSQ
RQKLPVFQYRNHILYLLEKYQTLILIGETGCGKSTQVPQYLHEIGHKVVVTQPRVAAAAS
LAARVAEEVGDALGESVGYAAGMTSLRSPNSSIVFMTEGVLLREMFASPLLMQYSVVVLD
EVHERSQMTDVLMGLLKKIAKKRKNLKIVVSSATMDAEFLKDFFNLTDKRDKERSTSVVM
SVQGRTHPIDVFYSQEPVPDYVKATVDTVIKIHENEPFGDILAFLTSQEEILTALETLQL
YAESNNEKNKYRKSFPSGILAANLSILPMYGSMPHYKQIKVFQMADKNVRKVVLATNIAE
TSVTIPGIVYVIDCGFHKLPYFDPSVGVESLCVCPLSRDNARQRAGRAGRTQRGKCYRLY
TESEFDKLPASVPPEISRSDLSSVLLQLKALGIHNLLRFTFPTPPPAKSLLSGLETLYAL
KAVDRDGNLTTSLGENMAELPLRPMCAKMLCSSGEYGCVEEALSIACMLQVEGIFTKSST
GKDNIAAKLSRRNNFEVAEGDIIMYLNVFDSYMKIKNSTHDEKRSKKACREWCQKMYVNH
RVMEKACDIRDSLEKLIKRKFGIENKTFEGPDLGTEKCQRIMKCVLSGFFPQAAHLSTDS
TYRSVRGAVLHISPDSCLFRVQQPSWVVFASVQSTGDKTYMRDMMTINKEWLLEIAPHYY
KQT
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcagacctcgattcataaaaccgggcaacgaccctctctatccagccaggaac
aaagatggtggaatagaaatcctcataaatgagaacacagattctgcactgaccacagat
agtgatgctaaaaccaattttgtgtacaaccggtaccatcatctacccttgactagtcag
cgacaaaagctcccagtgtttcagtatagaaaccatatattgtatttgctggagaaatat
cagactttgatacttattggagagactgggtgtgggaagtcgacacaagtgccgcagtac
ctccacgaaatcggacataaagtggtcgtcacacaaccgcgcgtggcggcggcggcgtcc
ctcgcggccagggtggcggaagaagtcggggacgcgctcggtgagagtgttggctacgcg
gccggtatgaccagtctgcgctctcctaatagtagtatcgtgttcatgacagagggcgta
ttgcttcgtgaaatgttcgcgtctcctcttctgatgcagtattcagtcgtcgttttggat
gaggttcacgaaagatctcaaatgactgacgtgctgatgggcctcctcaagaagatagcc
aaaaaacgcaaaaacctgaaaatcgtcgtgtcttcagccactatggacgcagaattcctg
aaggacttcttcaatttgacagacaagagagataaagagagatctacctctgttgttatg
tctgtgcagggacgaactcatcctatagatgtgttttatagtcaagaaccagtgccagac
tacgtgaaagctacggtagacacagtcatcaaaatacacgagaacgaaccttttggagat
attctcgcgttcctcacttcacaggaagaaatactaacagccctggaaacattacaactg
tacgcagaaagcaacaacgagaagaacaaatacaggaaatcctttccaagcggcatactg
gcggcgaatttatcaatactaccgatgtatgggagcatgccacactataagcagatcaag
gttttccaaatggcagacaagaatgttagaaaagtggtattagctactaatatagcggaa
actagcgtcactataccaggaattgtttatgtaatcgactgtggcttccacaagctgcca
tacttcgacccgtcggttggcgtggagagtctctgcgtctgtccgctgtcgcgcgacaac
gcgcgtcaacgcgccggtcgcgccgggcgcacgcaacgcgggaagtgttataggctatac
acagagtcggaatttgacaaactgcctgcaagcgtgccgccggagatttcgagaagtgat
ttatcgtcagtactgctgcagcttaaagctctcggcatacataatttactcagattcaca
ttcccaacgccgccgccagcgaaaagtcttctgtccggcttggaaactctatacgcttta
aaagctgtagatagagatggcaatctaacgacgtcgctaggagaaaatatggcagagttg
ccgctgagaccgatgtgcgctaaaatgctttgtagtagtggtgaatatggttgcgtggaa
gaggctttgtcgatagcttgtatgcttcaagtagaaggtattttcacgaagagttctacg
ggcaaggacaacattgctgctaagttgtctaggcgaaataattttgaggtagccgaaggc
gacataataatgtacttaaacgtattcgattcatatatgaaaataaagaattctacacat
gacgagaaacggtctaaaaaggcgtgcagagaatggtgtcaaaagatgtatgtgaaccac
cgcgttatggaaaaggcgtgcgatattagagatagcttagaaaaactaataaagaggaag
tttggtattgaaaataaaacattcgaaggacccgacttaggaacagagaaatgccagagg
attatgaagtgcgtgctatcaggatttttcccccaagcggcgcatttgagcacagactcc
acatacagaagcgtcagaggcgccgtgttacacatcagcccggatagctgtttgttcaga
gtgcaacagccgtcctgggtggtgttcgcaagtgtccagagtacgggagacaagacttac
atgcgagatatgatgacgattaataaggaatggctgttagaaatagccccgcattattat
aaacaaacctag
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