Leguminivora glycinivorella (soybean pod borer): 125237609
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Entry
125237609 CDS
T09956
Name
(RefSeq) fibril-forming collagen alpha chain-like
KO
K19719
collagen type II alpha
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125237609
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lgly00536
]
125237609
Glycosaminoglycan binding proteins [BR:
lgly00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125237609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Ig_3
I-set
ig
Ig_2
VWC
FnI_RECK
CFC
Motif
Other DBs
NCBI-GeneID:
125237609
NCBI-ProteinID:
XP_048000728
LinkDB
All DBs
Position
2:22631395..22653537
Genome browser
AA seq
1667 aa
AA seq
DB search
MSWQAAALALLLLQVSCKELTEPVNDQNLPQAQDPNFSDGDVTAYDEYENEADLGDFRGL
GTGPTRRPVSIGVRGEQTGYPRVKVSVRQLRLVRGQSRTVDCTPEGYPLPSIQWTKEEGG
FGSRTRQSGNLLIISNAQDEDRGNYVCTGLVNGNAVYTDYLTVDIVGGETSPRCIDQGHS
YVEGETWSPNNCTLCQCFGGRTNCSVLPACLTGEQAGPSRVRISERQLRIARGQSRTVDC
SPEGFPVPIIQWNKEGGGFGKGTRQSGNALVITDAHEDDRGTYVCAGVVAGRTVASEYLT
LEIVGGHSHAAAAGTSVRGVTGAVGEEGPPGPPGAPGTSGVPGAPGLPGPTGPLPDVNEH
LRRQVASNGDKGPAFDPYNYMQASVGAPGIRGVQGPPGPPGPQGFQGPRGEPGEPGLPGQ
QGPPGERGPQGLAGKDGSSGDDGEPGPAGAAGQPGPRGAPGLPGIQGLKGHRGFDGKDGA
KGDQGLAGEKGPTGQPGVMGPPGPVGPMGPRGERGREGSPGAPGMRGVDGVAGPPGPVGN
VGKPGSPGFPGAPGLKGEQGAVGPQGSQGMQGPRGESGRPGQPGEIGPQGLAGRDGIPGE
KGVAGQSGNAGPQGFPGPRGLPGVAGDPGIHGAKGEPGQIGERGVRGEPGIRGEPGAPGP
RGLPGSVGSEGKRGKRGLRGPAGNLGPQGERGQPGLRGLPGPDGPIGARGQPGERGNVGL
PGEKGITGDAGRPGPQGLQGPRGVVGRPGISGKQGPPGDRGIPGADGRPGEMGPQGLQGT
PGPMGSPGERGLQGEPGKDGEMGQPGPEGRKGDAGRDGSPGIQGAQGLPGPAGERGPAGP
AGPTGFPGMPGAAGLPGSSGKDGEPGVAGPAGPPGPAGPRGERGFNGDRGLPGPTGATGE
KGDVGAQGPDGPAGPEGPRGSKGQQGHPGALGLPGPRGPTGASGEKGERGSPGPTGNDGP
VGRQGEQGSQGPVGPAGPPGEPAERGEPGAPGTPGEAGANGSPGERGQPGLQGAQGLPGS
PGLTGMPGIKGDRGYSGPKGQQGASGSPGIAGEPGLRGLPGLAGAKGARGEHGPKGESGH
PGLPGRPGDLGPQGPQGSPGPAGTPGIAGPKGATGDAGRPGAPGPQGLTGPQGLEGVKGE
RGNEGETGPQGPAGPAGPPGERGPSGLPGMAGQPGPQGLRGAQGESGTPGKSGADGAPGP
IGAPGLQGPPGPMGEQGPEGRPGKLGQPGIPGRPGDKGPAGQPGISGPAGTPGLQGPPGQ
AGSPGPAGERGLRGEPGPAGVDGPRGPAGKQGAPGLDGAKGERGEAGLDGAKGHAGLPGL
PGMVGAPGRVGERGLPGPMGPPGKDGDSGPRGTPGRDGAPGPQGPAGPPGGRGPAGEPGR
HGPPGPAGPPGPPGPAGEGLAYDAAALAAMMQQGSIKGPDPLNDDPNMLPARFFKNDMTD
AERKEIVTKAYERLKVSLDKFLRPDGSQGAPGKTCGDIKYHHPGFKSGQYWIDPNGGDIN
DAILVHCDMATGSSCIYPKPRESKDISYKGKEKEVWLSELEDGFTINYKADHSQLTYLQL
LSGRASQNVTLHCRNTVGYYDPGAHNHRRGLKLLAYTDAEILPRANNRLRYSAVLDDCQY
KSPEWAKTIVEYSTDKSGRLPLLDVAVRDLGRGQQAFRVELGLACFT
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggcaggcggccgcgctggcgctgctgctgctgcaggtgtcctgcaaggagctg
actgagcctgtcaacgaccagaacctgccgcaagctcaggaccccaacttcagcgacgga
gacgtcactgcgtatgacgaatacgagaatgaagctgatttgggagactttcgaggatta
ggaacaggccctacccgcagacctgtgtccattggagttcgaggcgaacaaaccggatac
ccaagagtgaaagtcagcgtgcgtcaactaagactggttaggggacaaagccggacagta
gactgcactcccgagggctaccctctcccgtctatacagtggaccaaggaagaaggcggt
ttcggctcacggaccagacaaagcgggaacctgctgataatatcgaatgcccaggacgag
gaccggggcaactacgtgtgcaccggcctcgtcaacggaaacgccgtctacaccgattat
cttaccgtcgatattgttggtggcgaaacaagcccgcgctgtatcgaccaagggcactcg
tacgtggagggcgaaacctggagccccaacaactgcacgctctgccagtgcttcggcggc
cgcaccaactgctcagtactgcctgcttgtctcacaggggagcaagcgggaccttccaga
gttagaattagtgagcgtcaactgaggatagcaagaggacaaagccggactgttgactgc
tctcccgagggattcccagtcccaatcatacaatggaacaaggaaggtggcgggtttgga
aagggaacgcgtcaaagtgggaacgcgctggtgataactgacgcccacgaagatgatcgc
gggacgtacgtgtgcgccggcgtagtggcggggagaaccgtcgccagcgagtacctcacc
cttgagatagtaggaggtcatagtcatgcagctgcagcaggcacatctgtccgcggcgtg
acgggagctgtcggtgaggagggtcccccagggccccccggagcgccgggcaccagcggc
gtccccggcgcgcccggcctgcctggccctaccggcccgctgcctgatgtaaacgaacat
ttgagacgacaagtagcgagtaacggagataaagggccagcattcgatccctacaactac
atgcaagcttctgtaggcgccccgggcattagaggtgtacagggaccaccaggaccaccg
ggaccgcaagggttccagggaccacgaggcgagcctggcgagccgggtttgcctggacag
caaggacccccgggtgaaaggggaccccaaggattggctggaaaagatggatcttcgggc
gacgacggcgagccgggtccggcgggcgcggccggacaaccgggcccgcgcggggccccg
ggcctgcccggcatccagggtctcaagggccaccgcggcttcgacggcaaggacggcgcc
aagggcgaccaggggctcgcgggtgagaagggaccgaccggccagcctggagttatggga
ccacctggccctgtgggtccgatgggaccgcgcggagagagaggtcgcgaaggctctccg
ggtgctcccggcatgcgcggcgtggacggtgtggcgggaccaccaggacctgtgggcaac
gttggaaaacctggttctccaggatttccaggcgcaccagggctaaagggcgaacaaggc
gcagtaggcccccagggcagccaaggcatgcaaggtcccaggggagaatcgggacggcca
ggtcaacccggagaaattggcccgcagggcctcgctggccgtgacggtatccctggagag
aagggtgtggctggtcaatcaggaaacgcggggcctcaaggcttccctgggcccagaggc
ttacctggtgtagctggcgaccccggaattcatggtgctaaaggagaaccgggtcaaatt
ggagaaagaggtgtgagaggcgaacccggcatcagaggggagcctggtgctccaggacca
cgtggtctgccaggaagtgttggatcagagggcaaacgcgggaagcgagggcttagggga
cctgccggtaaccttggacctcaaggagaaaggggtcagccagggttgagaggtttgccc
ggtcctgatggaccgattggagctcggggccaaccaggtgaaagaggaaatgttggttta
cctggtgagaaaggtattactggtgacgctggaagacctggtcctcaaggattgcaaggt
cctagaggtgtagtgggccgaccaggaatatctggcaaacaagggccccctggagaccgt
ggaatacctggagcagacggcaggcccggagaaatgggacctcaaggcttacaaggaact
cctggacccatgggcagcccgggcgaacgaggattgcaaggtgaacctggaaaagacgga
gaaatgggtcaacctggacctgaaggccggaagggcgatgcaggacgggatggtagccct
ggtatccagggcgcacagggtcttccgggacccgccggtgaaagaggaccagctggacca
gcaggccctactgggttccctggtatgccgggagccgccggtctacccggctcgtcaggc
aaggacggcgagcccggcgtggcggggcctgcgggccctccggggccggccgggccgaga
ggcgagaggggcttcaacggcgatcgcggtctccccgggccaactggtgcgaccggcgag
aaaggtgacgtgggagcgcagggacctgatggacccgcgggtccggaaggtcctagaggc
agcaaaggtcaacaagggcaccccggagctttgggcttaccgggaccgagaggacccact
ggtgcttcaggcgaaaaaggcgaacggggttcacctggtcccacgggcaatgatggacct
gttggtcgtcaaggagaacaaggctcacaagggcccgtgggcccggccgggccgcccggg
gagccggcggagagaggcgaacccggcgcgcccggcacgcccggagaggcgggcgccaac
ggctcgcctggtgaacgcggccagcccggcctgcagggcgcgcagggcttgcccggatct
cccgggcttacaggcatgcctgggatcaagggcgacaggggctacagcggacccaagggc
caacaaggagcatctggcagcccaggcattgctggagagcctggtctacgaggactgccg
ggtttagcgggcgctaagggggcacggggcgagcatggccccaagggagaatcaggccat
cccggtctaccgggaagacccggtgaccttggaccgcagggtcctcaaggtagccccggt
ccagcgggaacacccggtattgccggaccaaaaggagcaaccggagatgcaggccgaccg
ggagctccaggtccccaagggctcacaggccctcagggtctagaaggtgtgaagggcgag
agaggcaacgagggtgaaactggacctcaggggccagctggaccggcgggacctcccggc
gagaggggaccaagtggcttgccgggaatggcaggacagccagggcctcaaggattacgt
ggagctcagggtgaaagtggaactccgggcaaatcaggtgctgatggcgctccaggcccc
ataggcgcccctggactacaaggtccccctggtcccatgggagagcaagggccggaggga
cgtcccgggaagctgggacagccgggaatccccggcaggcctggagacaagggaccggcc
gggcagccgggtatttctggaccagctggtactcctggattacagggccctcctggacaa
gctggatctcccgggccggcgggtgagcgcggactgcgcggcgaacccggtcccgccggc
gtggacggacctcgaggaccggctggcaagcagggagctcccggcctggacggcgctaaa
ggagagaggggcgaagctggcttagatggagctaagggtcacgccggtctcccaggcttg
ccgggaatggtcggtgcgcctggacgcgtgggagaacgaggcctgcccggaccgatggga
ccgccaggaaaagacggcgattctggccctagaggcacacccggccgtgatggcgctcct
ggcccacaaggtccagcgggcccacctggaggccggggacccgccggcgaacccggacgg
cacggacctccgggcccggccgggccgccgggaccccccggacccgctggcgaaggcctg
gcttatgacgctgctgctcttgctgcgatgatgcaacaaggttcaataaaaggccccgac
ccactcaacgacgatcctaacatgctgccggcgcgtttcttcaagaacgacatgaccgac
gccgaacgaaaggagatagtgaccaaggcgtacgaacgtctgaaggtgtcgctggacaaa
ttcctgcggccggatggctcgcaaggcgcgcctggcaagacctgtggggacataaagtat
catcaccctgggtttaagagcggtcagtactggatcgacccgaacggcggcgacatcaac
gacgcgatcctggtgcactgtgatatggctacgggcagcagctgcatctaccccaagcct
agggagtccaaggacatctcttacaagggcaaggagaaagaggtctggcttagcgagctg
gaagatggtttcactatcaattacaaggccgaccacagccagctgacgtacttgcagctc
ttatcgggccgcgcctcgcagaacgtgacgctgcactgccgcaacaccgtcggctactac
gaccccggggcacacaaccaccgccgcggactcaagctgctcgcctacactgacgccgag
atcctgccccgcgccaacaaccgcctgcggtactccgccgtgctggatgactgccagtac
aagtcgccagaatgggcaaagacgatcgtggagtactcgacagacaagtccgggcggctg
ccgctgctagatgtggcggttcgcgacctcggccgcggccagcaggccttccgcgtcgag
ctcggccttgcctgcttcacgtag
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