Leguminivora glycinivorella (soybean pod borer): 125238077
Help
Entry
125238077 CDS
T09956
Name
(RefSeq) protein CASC3-like
KO
K14323
protein CASC3
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03013
Nucleocytoplasmic transport
lgly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125238077
03015 mRNA surveillance pathway
125238077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125238077
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125238077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
125238077
NCBI-ProteinID:
XP_048001324
LinkDB
All DBs
Position
22:complement(5258240..5292947)
Genome browser
AA seq
662 aa
AA seq
DB search
MSVVARRDSGDYSDSQEIERNSTNDGPESDYDSAASDTEHSDQDPESQETERRVDDDEDR
SNPQYIPKRGTFYEHDDRTAASGEEPANTTSETSSEKKEGSPPAERRRPPRKSEVIDRWA
HDKFNENEQAPKSRDELVAIYGYDIRNEDAPPHARRNRRYGRGPNKYTRTWEDEEAYRRA
QAAPPRKPPNPEDFPDLDTAHKHSSRRLRGPRPRSKSQPTSNESLSNGSALRRHASTKTK
ARPTPAKSTPAAKVDTKPKETLPKLENLTITTTVVNNNSSQPARKVNAVAQQRPVPTDQG
KKKAPPQQPAAPKSPSAPAPAPQKAAPAPAQPAPPAQPAAGAEPRGSKRYSSLRQRPLAE
TYSPQPSQGQQQQQQPQQQPQMRYHPAEYAGNAPSATNQHQGSPGPQMHPQQLIHPVHRN
AAQAQHGPAPQHPQQHSQQVRHVGMVEPQQLMTHAHHNIHNLPPQPHTMAAAPIQQTQGY
APPAMMPAQYMQQGGNGAVFGGAAIYAAPPPQPYPHQLYQHHNYATSAGGVTYYSAVEQE
PPAAAPRAPRRPTAAIPIVPPQPPPQPQPQPQRTDRPANSSEKDNIDRIVENMFVRKPWP
GAQPNTDGTEDTESRSQKAESRKESQPSSLTSSSISTDSKDKPEEHTDEKPEVKETPESI
DA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgtagcgcgacgggactccggagattattcagattcccaggaaatcgagcga
aattcgacaaacgatgggccagagtcggactacgattcggcggccagtgacaccgaacac
tctgatcaggaccctgagagtcaggagacggagaggcgagtagatgatgacgaagacagg
agtaaccctcagtacattccgaagcggggcacattctacgaacatgacgaccgaactgca
gctagtggtgaggaaccagcaaacactacatcagagacctcttcagagaagaaggaaggc
tcccctcccgccgagcgccgcaggccgccgcgcaagtcagaggttattgaccgctgggcg
cacgacaaattcaacgagaacgaacaggcgccgaagtctcgcgacgagctggtggctatc
tacggctacgacattcgcaatgaagacgctccaccgcacgcgcgccgcaaccgcagatat
ggtcgcggacccaacaagtatactcggacttgggaggacgaggaggcgtacagacgcgcg
caagccgcgccgccgcgcaagccgcccaaccctgaagacttccctgacttggacactgct
cacaaacacagcagtagaagactccgcggcccccgtccgcgctccaagtctcaacccacc
tccaacgagtctctctccaacggctccgcgttgcgccgacacgcctccaccaagacgaag
gccaggccaacgcctgccaagagcacacccgccgccaaggtcgacaccaagcctaaggaa
acactgcccaagctggaaaaccttactatcaccactactgtagtcaataacaatagcagt
cagccagcacggaaagtgaacgcagttgcgcagcagaggcctgtacccaccgaccagggc
aagaagaaggcaccgccacagcagcccgcggcaccgaagtccccgtccgcgccggcgccg
gcgccgcagaaggccgcgcccgcgcccgcgcagcccgctccacccgcgcagcccgccgca
ggcgcggagcctcgcggtagtaagcggtatagtagcctacggcagcggcctctcgcagag
acgtactcgccacagccgtcacaaggacaacagcaacaacaacaaccacaacaacagcca
cagatgcggtatcatccagcagagtacgcgggcaacgcgccgtcggcgaccaaccagcat
caaggcagcccgggaccgcagatgcatccccagcaactcatacacccggtacatcggaac
gcggcgcaggcgcaacacggccccgcgccgcagcatccgcagcaacactcacaacaggtc
cggcacgttggcatggtagagcctcagcagctcatgacgcacgcgcaccacaacatccac
aatctgccaccgcagccacacactatggcagcagcccccatacaacagacgcaaggctac
gcaccgcccgcgatgatgccagcgcagtacatgcagcaaggcggaaacggcgcggtgttc
ggtggcgcggcgatatacgcggcgccgccgccacagccctacccacaccagctttaccag
catcacaactatgcgacgtcggcgggcggcgtgacgtactactcggcggtggagcaggag
ccgcccgccgccgcgccgcgcgcgccgcgccgccccaccgccgccatccccatcgtgccg
ccgcagccgccgccgcagccgcagccgcagccgcagcgcaccgacaggcccgcgaattcg
tcggaaaaggacaacatagacaggatcgtagaaaacatgtttgtgcggaaaccctggccc
ggcgcgcagcccaacacagatggcacagaagacaccgaaagccgtagtcagaaggccgag
agccgtaaagagtcgcagcccagcagtctaacgtccagctccatctccaccgactccaag
gacaagcccgaggaacacactgatgagaagccagaggtgaaggagacaccggagagtata
gacgcctga
DBGET
integrated database retrieval system
