KEGG   Leguminivora glycinivorella (soybean pod borer): 125238145
Entry
125238145         CDS       T09956                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 48 homolog
  KO
K15361  WD repeat-containing protein 48
Organism
lgly  Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lgly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    125238145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lgly03400]
    125238145
DNA repair and recombination proteins [BR:lgly03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     125238145
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_DCAF12 WDR54 WD_LRWD1 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 Nucleoporin_N RAWUL
Other DBs
NCBI-GeneID: 125238145
NCBI-ProteinID: XP_048001382
LinkDB
Position
2:complement(23818966..23832961)
AA seq 642 aa
MASTMRKKTQVSFVIRDEEERRHKNGVSSLQLDPIQGRLYSAGRDGIIRVWNTATGVQDR
YIQSMEHHTDWVNDIVLCCGGKNLISASSDTTVKVWNAPKGFCMSTLRTHKDYVRTLAYA
KEKEQVASAGLDRAIFLWDVNTLTALTASNNTVTTSSLVGNKESIYSLAMNPPGTVLVSG
STEKVLRVWDPRNCARLMKLKGHSDNVKALVVSRDGQQCVSGSSDGTIKLWSLGQQRCVS
TIRVHTEAVWALLATENFTHIISGGRDKLVIITELRNPDNSIIVCEETAPILKLCFTADQ
QGVWVSTSESDIRCWKLPPLSNINSDMYNQNNYNPNNVYQTQPTTSIPGGPAIRHYKVLN
DKRHILTKDTANNVALYDVLKACKLEDLGEVDFEEEVKKRFKMVYVPNWFNVDLKTGMLT
IHLGQDETDCLSAWVSAEAGLTTELDQKVNFGALLLQALLEHWNHPSRVSDAGQKVIGNN
FFSVPLHTPLIFSEVGGRTLYRLQVGDAGGETEGNLLNETVPVWVVDVAIEMAAPKLNKL
PFYLLPHASCQTKQDRQKKDRLVANDFIQCRKVAEHVVEKIVGGGDGGSPRAAREPAPEP
QDRVELLCADQVLDPNMDLRTVRHFIWKSNVEFTLHYRVLKQ
NT seq 1929 nt   +upstreamnt  +downstreamnt
atggcctcgacgatgcgtaagaaaactcaagtatctttcgtaatccgcgacgaggaagaa
cgccgtcataaaaatggcgttagttcactgcaattggacccaatacaaggcagactatat
tccgcaggccgagatgggatcattagagtatggaatacggctacgggtgtccaggataga
tatatacaaagcatggaacatcacacagactgggtgaacgacatagttctatgctgcggc
ggcaaaaaccttataagtgcatcttctgacaccaccgtcaaagtatggaacgcgccgaaa
ggattttgcatgtctactttacgtactcacaaagattacgtacgcacactagcttacgct
aaagagaaagaacaagtagccagcgccggcttagaccgtgcaatcttcctttgggatgtc
aacacattgacagctttaactgcaagcaataacacagtgacaacttctagtctcgtcggt
aataaggagtctatatacagtctagctatgaatccacctggcacagtcttagtaagtggt
tcaactgaaaaagtactcagagtttgggaccctagaaactgtgcaaggcttatgaaacta
aaaggacattcggacaatgttaaggcactggttgtgagcagagatggtcagcagtgtgta
tcaggcagctctgacggtacaataaaattgtggtctctaggacagcagaggtgtgtatct
acaattagagttcatacagaagcagtatgggcacttttggctactgaaaactttacacat
attatctcaggaggcagagacaaactagtcattataacggagctgcggaatcctgataat
tcaataatagtctgtgaagaaactgcacccattctgaaattgtgttttactgctgaccag
caaggtgtttgggtgtctacttcagaatctgacattcggtgttggaaactgccaccatta
tctaatataaactcggacatgtataatcagaacaattataatcctaacaatgtatatcag
actcagcccaccacaagtatacccggagggccagcaataagacactataaagtattaaat
gacaaacgccacatattaacgaaagacactgcaaacaatgtggctctgtatgatgtgcta
aaagcatgtaagctagaagacttaggtgaagtagattttgaagaagaagtgaaaaaacgt
tttaaaatggtttatgtcccaaactggttcaacgttgatttgaagactggtatgttaact
attcatttaggacaggatgagacagattgcctcagtgcttgggtgagtgcggaagccgga
ctgacaacagagttggaccagaaagtcaattttggtgcattactgttgcaagctttgttg
gagcactggaatcatccaagcagggtgtctgacgctggacaaaaagtgattgggaacaat
tttttcagtgtgccattgcacacaccattaatatttagtgaagttggaggcagaacactt
tataggctacaggtcggtgatgcaggtggtgagacagaaggcaacttactaaacgagacg
gtaccagtatgggtggtggatgtagccatagagatggctgcgccgaagctaaacaagctg
cctttttacctgctgccccatgctagctgtcagactaaacaagaccggcagaaaaaggac
cgattagtggcgaatgacttcatccaatgccggaaggtagcggagcatgttgtggagaag
atcgtcggcggtggcgacggcgggtcaccgcgcgccgcgcgcgaacccgcgccggagccc
caagaccgagtagagttgctttgcgcagaccaggtactggacccgaacatggacttacgt
acagtgaggcacttcatatggaaatctaacgtggaattcactctgcactacagagttttg
aagcaatga

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