Leguminivora glycinivorella (soybean pod borer): 125238346
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Entry
125238346 CDS
T09956
Name
(RefSeq) LOW QUALITY PROTEIN: coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgly04131
]
125238346
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lgly04147
]
125238346
Membrane trafficking [BR:
lgly04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
125238346
Exosome [BR:
lgly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125238346
Exosomal proteins of bladder cancer cells
125238346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
TPR_COPA_B
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Ribosomal_L12
Motif
Other DBs
NCBI-GeneID:
125238346
NCBI-ProteinID:
XP_048001602
LinkDB
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Position
23:6327921..6364555
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AA seq
1225 aa
AA seq
DB search
MLTKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH
IQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTCFHHEYPWILSASDDQTIRIW
NWQSRQCISVLTGHNHYVMCAQFHPTDDLIVSASLDQSVRVWDFSGLRKKNVAPGPAGLA
EHLRNPQATDLFGQADAVVKHVLEGHDRGVNWAAFHPTLPLIVSAADDRLVKLWRMNDAK
AWEVDTCRGHYNNVSCVLFHARHELILSNSEDKFIRVWDMTKRTCLHSFRREHERYWVLA
AHPTLNLFAAGHDAGMILFKLQRERPAYAVHNNLLFYIKDRQIRKLDMQTNRDSPVMQIK
GSGRNQPYSMSLNHAEWCVLVNWRIGESSSYELYQGREGGETAEPLRAPAAHAVWVARNR
FAALDRNNQLVIKNLKNEVSKKISTPTCEEIMYAGTGMLLLREPDCVQLLDVQQKRTIAT
VKVSKCRYAIWNSDMSLVALLGKHTVTICTRKLEQLCSVTEGARVKSGAFDDSSPQPVFI
YTTANHIKYSCRDVDYGIIRTLDVPVYAVKVLASEAGARVVCLDREARPKVLNIDPTEYR
FKLALVTRQYDQVLHMVRTAKLVGQSIIAYLQEKGYPEVALHFVKDARTRLSLALQCGNI
EVALDAAKSLDEKASWDKLAEAALQTGNHQIVEMCYQRTKNFDKLSFLYLITGNLDKLRK
MMKIAEIRKDTSAQFQGALLLGDAAERVRLLKNAGQLSLAYLTAANHKLDEDAEALKAQL
EAAGAPVPEVKLQKKVLRPPLPVHNSQPNWPLLAVSKSLFEVASAARASGLDTGVGAGGD
EPLEAGGAWGDDDDVLQETKEAGDGEEQPMEDACDDGGWDVGDEDLDLPEELAPVSADID
GGDDTPAYFVAPTRGSSVALSAKLKTAHDHVATGQFEIAFRLLNEQVGVVNFEPYLETFL
AMYSSARLTFGALPSTPPLVANLHRNWQEASGKDLLPIVTAKLNDLVTQLQQCYQMTTAG
KFTEATEKLQRVVQRVPLLHVEXKAELAEAQQLLAICREYLLGLQMETARKAMPKNTLEE
QKRTCEMAAYFTHCKLQPVHQILTLRTALNMFFKLKNYRTAASFARRLLELGPRPEVAQQ
ARKILQACEKTPTDEHQLLYDEHNPFTICGISYKPIYRGKPEEKCSLCXCSYLPEHKGKL
CAVCGVAEVGKDVLGLRICPLQFTR
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaaattcgagacaaagtcggctagggttaaaggcatatcatttcatgccaaa
cggccatgggttttggccagtttgcacaatggggtgattcagctgtgggactatcgtatg
tgtacattgctggagaaatttgatgagcatgatggtcctgtacgtggcatttgtttccac
atccaacagcccctatttgtgtccggaggagatgactataaaatcaaggtatggaactac
aagcaaaggcgctgcctgttcacgctgctgggtcacttggattacatccgcaccacatgc
ttccaccacgagtacccgtggatcctcagtgcctctgatgaccagacaatcagaatatgg
aactggcagtcccgccaatgcatcagcgtcctcactggacacaaccactacgtcatgtgt
gcacaattccacccgactgacgacctgatcgtgtcagcatcactcgaccagtccgttcgc
gtctgggactttagcggactgcggaagaagaatgtagctccgggcccggctggcttggct
gagcatctgaggaacccgcaggccactgatctgtttggacaggctgacgctgtagtaaag
catgtgttagaaggacacgaccgcggcgtcaactgggcggcgttccatcctactctaccg
ctcattgtgtccgccgctgacgaccgccttgtgaaactgtggcgtatgaacgatgccaag
gcgtgggaagtggacacatgccgcgggcactacaacaacgtgtcctgcgtgttgttccac
gctcgccacgagctcatcctgtccaatagtgaagacaagttcatacgcgtctgggacatg
actaaacggacatgtctgcactcgttcagacgggaacatgagcggtactgggtgctggcg
gcccatccaaccttgaacctgttcgcggcaggccatgatgccggcatgattctgttcaag
ctgcaaagagagaggcctgcgtacgccgtgcataacaacctgctgttctatattaaagac
agacaaattcgcaagttggacatgcagactaacagggattcccctgtcatgcagatcaag
ggtagtggcagaaaccagccgtacagcatgtccttaaaccacgcggaatggtgcgtccta
gtcaactggcgtatcggcgagagcagctcgtacgagctatatcagggtcgcgagggcggt
gagacagctgaacctttgcgcgcgccggccgcccacgctgtgtgggtggctaggaaccgc
ttcgctgctctggacaggaacaatcagctcgtcataaagaacctgaagaacgaggtctcc
aaaaagatctccacgccaacttgcgaggagatcatgtatgctggcacaggaatgctgcta
cttcgcgagccagactgcgttcaactattggatgttcagcagaaacgaaccattgctacg
gtgaaagtctccaaatgccgctacgctatctggaactccgacatgtcactcgttgcactc
ctgggcaaacacaccgtcaccatctgtaccagaaaattggaacaactctgttcggtgaca
gaaggagccagggtcaagtctggagcttttgatgacagttctccgcagcctgtgttcata
tatactactgcaaaccatattaaatactcctgcagagacgttgactatggcatcattcgc
accctggacgtgcctgtttacgcagtgaaggtgctagcttctgaagccggtgccagagtc
gtgtgtctcgaccgcgaggccaggccgaaggtgctcaacatagacccgacggagtacagg
ttcaaattagcgctggtgactcgccagtacgaccaggtactacacatggtgcgcactgct
aagctcgtcgggcagagcatcatcgcctacctgcaggagaaaggttacccggaagtggcc
ctccacttcgtgaaggacgcgcgcacgcgcctgtcgctggccctgcagtgcggcaacatt
gaggtggctctagacgcggccaagagcttggacgagaaggcttcttgggacaagctagct
gaggccgccttgcagactggcaaccaccagatcgtagaaatgtgctaccaacgcacaaag
aacttcgacaaactgtccttcctgtatctcatcaccggaaacctggataagcttcgcaag
atgatgaaaatcgctgagattaggaaagatacctcagcgcagttccaaggggcgcttctt
ctgggcgatgctgcagaaagagtcaggttgctcaagaatgcaggacagctgtccctagcc
tacctaacagcagccaaccacaagctggatgaggacgcggaagccctgaaagctcagctg
gaggccgcgggcgctccggtaccggaagtgaagctacagaagaaggtgctccgccccccg
cttccggtgcacaactcgcagcctaattggcctctcttggcagtttctaaatctctgttc
gaagtggccagcgcggctcgcgccagcggcttggacacaggcgtgggagccggcggtgac
gagcctttagaagcgggcggcgcttggggcgacgatgacgacgtacttcaagaaactaag
gaggctggagatggggaagaacaaccaatggaagacgcatgtgacgacggtggatgggac
gtgggtgatgaagacctagatctgcctgaagagctggctcctgtttctgcggatatcgac
ggtggtgacgacacgccagcgtacttcgtggccccaacccgcggctcgagtgtcgcgctg
tccgctaaactcaagaccgcacatgatcacgtcgctactggacagttcgagatcgctttc
aggcttctaaacgagcaagtgggcgtcgtgaacttcgagccgtatctagaaacgttccta
gccatgtattcaagcgctcgtctcactttcggagctttgccttctactccaccgctcgtc
gccaacctgcacaggaactggcaggaggctagcgggaaggatctgctgcctatagtcacc
gcaaaactcaacgacctcgtcacccaactgcaacaatgctatcaaatgaccaccgccggc
aagtttaccgaagccacagagaagctacaacgcgtggtccagcgcgtaccgttactacat
gtggagnggaaagccgagctggctgaagctcaacaattactggctatctgtagggaatat
ctgttgggactgcaaatggagactgctagaaaagcaatgcccaaaaataccctcgaagag
cagaaacgaacttgcgagatggccgcctacttcacgcactgcaaactccagccggtccac
cagatcctcaccttgagaactgctctcaacatgtttttcaagctcaagaactatagaacc
gctgcctcgtttgctaggaggttgcttgaacttggacctaggcctgaagtagctcaacag
gcaagaaaaatcctccaagcctgcgaaaaaaccccaaccgacgagcaccaactcctctac
gacgaacacaatcccttcaccatctgcggcatcagctacaagccgatataccgcggcaag
cccgaggagaagtgctctctctgcnggtgctcgtatctgccggagcacaaggggaagctc
tgcgccgtctgcggagtcgccgaggtcggcaaggacgtgctgggcctgaggatctgcccg
ctgcagttcactagataa
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integrated database retrieval system
