Leguminivora glycinivorella (soybean pod borer): 125238559
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Entry
125238559 CDS
T09956
Name
(RefSeq) LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125238559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgly03036
]
125238559
Chromosome and associated proteins [BR:
lgly03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
125238559
REST complex
125238559
Heterochromatin formation proteins
Other heterochromatin formation proteins
125238559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3_corepress
Sin3a_C
PAH_ZNF598
HHD_RTEL1
Coilin_N
Motif
Other DBs
NCBI-GeneID:
125238559
NCBI-ProteinID:
XP_048001853
LinkDB
All DBs
Position
24:complement(8154227..8220663)
Genome browser
AA seq
1343 aa
AA seq
DB search
MMKRTGVPRLAPDEPAPLPQSPAQMQQAGASNMHTLAQSAQPQIIGPAAMLSVGGYARGA
RPAAPRPVINYMKAGVQYPKQPPQPQQPPLRHKVTPPQQPLPLGAAGPGRQSPPAALPAA
AQPPGAQFQRLKVEDALSYLDLVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGVITRVSN
LFKGHPELIVGFNTFLPPGYKIEVQSNGQVSVSMPSPTGLNSGGVLLGVGSVGAVPQPAH
HPPAQLVHLLPVAQSVSNAIVHNLSVSAAPANTLHHISQAHQQIEAAIHHAPGTVAPPAG
SGPHAAPAPPGQPVEFNHAIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDVKEPQAK
QQTEQEVYSQVAKLFENQDDLLAEFGQFLPDAKAVTKPHYPPHPRTPPLMAPQQRPEPEP
ERFLPAPAPSPPHAQPPQHLLPQQVAKHTSTVASSAPPQQHLKRSPSFTSSTQMPVGLPP
PKKPRISSLTGGMVRDVSYAEAAKYGTQQEYNFFDRARRALRSQEVYDNFLRCLLLFTNE
IISSSELVSVTSPFLCRHPELHKWLQDFVGPVSPPSTPTQPSSGYNNSYGMSSNSLLGYD
RERERERADRERSLDNKASVRYEPIGPLGAQLRHDRPQGDAALDIDLSTCKRLGTSYCAL
PREAAARRCSGRTPLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEEYIYRCEDERFELDV
VIETNAATIRVLEGVQKKLSRMTADDAAKYRLDDCLGGHSATIHQRALRRIYGEKVAVDI
IAGLKKNPVVAVPVVLRRLKAKEEEWREAQKGFNKQWREQNEKYYLKSLDHQGINFKQND
LKAMRSKSLYNEVESAYAARKPGPHLVVDYHLKGRQEAIKVVRDAAELLIHHARRQTGIQ
KAEKRRIKQLLRHFLPDLFAHPRQPLSDDERDEEEKEEPSSPAGSPAAEAAAEDKAVKQE
KQESSESDNASDKSSRHHKNDKENKPKNNNHEPRADKDVKEEDDFRDHPPNEARFVCTMS
WYIFLRLHGVLCARLGALRRGALALAEREAQERALRRPSVAAALRLKPNNLPADASSPAD
YYPALLELVRGVLDGNTEATAYEDAAREMFGIHAYPAYTLDKLVWNAVRQLQRCVSEPWS
LRAAELAARGGMRGALSYVRRAQRFLHKEHTAFLIKLYGGDECRVSFELLESGGEGRASP
NNDSSRLSPTNQSRASAPNGSPVSRLAAWSLYTERYSRPDLRAASAPNKPVFLARNAARC
GGSGHNVAPGDCGAAHAARGKRKPHRIVDRSECTLSSGIRLVASRPHHLYRAGALAAAKA
SHERLHAARRAKFKTWLQGNAYR
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcgaacaggcgtcccccggctggccccggatgagcctgccccgctgcctcag
tcacctgctcagatgcagcaagctggtgcaagcaatatgcacactttggcccagtcggcc
caaccccaaatcattggtccagcggccatgctatcagtgggcgggtacgcgcgcggcgcg
cggcccgcggccccgcgccccgtcatcaactacatgaaggccggcgtgcagtaccccaag
cagccgccgcagccgcaacaaccgcctttacggcacaaggttacgccgccgcagcagccg
ctgccgctcggagccgccggcccgggccgccagtcgccgcccgccgcgctgcccgccgcc
gcgcagccgcccggcgcgcagttccagcggctcaaggtcgaggacgctctgtcctacctc
gacctcgtcaaatacaagttcaacactcaaccacaagtctataacgactttctggacatc
atgaaggagtttaagagtcaaacgattgacactcccggggtaatcaccagggtctcgaac
ctgttcaaggggcacccggagcttatagtcggcttcaacactttcctgcccccgggatac
aagattgaagtacagagcaatggacaggtgtcagtgtcgatgccgtctccgaccgggctg
aacagcggcggcgtgctgctgggcgtgggcagcgtgggcgccgtgccgcagcccgcgcac
cacccgcccgcgcagctcgtgcacctgctgcccgtcgcgcagtctgtcagcaacgcgata
gtgcacaacttgtctgtcagcgcggccccggcgaacacgctgcaccatatatcgcaggcg
catcagcagattgaggcggccatacatcatgctcctggcacggtcgcgccacctgctggc
tcaggtccgcacgcagcgcctgcgccgcccggtcagcctgtcgagttcaaccacgctatc
gaatatgtcaacaagataaagtcgcggttctctcgccaaccggacaagtataagcggttc
ctggagatcctgcacgcgtaccaacgcggccatagggacgtgaaggaacctcaggccaag
cagcagacggaacaggaggtttattcgcaggtggcgaaactgtttgagaaccaggacgac
ttgctggcggagttcggccagtttctgccggacgctaaggcggtgaccaagccacactac
ccgccgcatccgcgcacgcctccgcttatggcaccacagcaacgtccggaaccggagccc
gagcgcttcctgcccgcgcccgcaccctcgccgccgcacgcgcagccgccgcagcatctg
ttgccgcagcaggtggccaaacacacgagcactgttgcgagcagcgctccgccgcagcag
catctgaagcgctcgcctagcttcacctcgtctactcagatgcctgtcggcctcccgccg
ccaaagaagccgcgcatatcgtccttgactggtggcatggtgcgagacgtgtcatacgca
gaggctgccaaatacggaacccaacaggaatacaacttctttgacagagcccgccgggcg
ctccggtcacaggaggtttatgacaacttccttagatgcctgctgctcttcaccaacgag
atcatctcgtcctctgagctggtgtcggtgacgtcgccgttcctgtgccgccaccccgag
ctgcacaagtggctgcaggacttcgttgggcccgtctcgcccccctccacccccacgcag
cccagctccggttacaacaacagctacggcatgtccagcaacagcctgctgggctacgat
cgcgagcgggagcgtgagcgggcagaccgcgagcgctcgctggacaacaaggcgtccgtg
cgctacgagcccattggaccgctcggcgctcagctgcgccatgacaggccgcagggcgac
gctgcgcttgatatagatctgtcgacgtgcaagcgtctgggcacgtcgtattgcgcgcta
ccgcgcgaggccgctgcgcgccgttgctcgggccgcacgccgctctgcaaggaggtgctg
aacgatacttgggtatccttccctacgtggagtgaggactcgaccttcgtgacgtcacgc
aagacgcagtatgaagagtacatctaccggtgcgaagatgaaagatttgagctggacgtg
gtaatagaaaccaacgctgccaccatccgcgtcctcgagggcgtgcagaagaagctgtcg
cgcatgacggccgacgacgcggccaagtaccgcctggacgactgcctcggcggccactcc
gccaccatccaccagagggcgctgcgccgcatctacggcgagaaggtggcggtggacatc
atagcgggtctgaagaagaaccccgtggtggccgtgcccgtcgtgttgcgccggctcaag
gctaaggaagaggaatggagagaagctcagaagggcttcaacaagcaatggcgcgaacag
aacgagaaatactacctgaagtcgctcgaccaccagggcatcaacttcaagcagaacgac
ctcaaggccatgaggtccaagtctctctacaacgaggtggagagtgcgtacgccgcgcgc
aaacccggcccgcatctcgtggtagactaccacttgaagggccgacaggaagccatcaaa
gtggtccgcgacgcggccgagctcctcatccaccacgcgcgccgccagaccggcatacag
aaagcggagaaacgacgcatcaagcagctgctcaggcacttcctgccagacttgttcgcg
caccctagacaaccgctctctgatgatgagagggacgaagaagagaaagaggagccttcg
agcccggccgggagccccgcggccgaggccgcggctgaagacaaggcagttaaacaggag
aaacaagagtcgtcagagtctgacaacgcgtcggacaagtcgtcccgccaccacaagaac
gacaaggagaacaaaccgaagaacaacaaccacgagccgcgcgccgacaaggatgtcaag
gaggaggacgacttcagagaccatccgcccaacgaggcgcggttcgtgtgcacgatgtcg
tggtacatcttcctgcggctgcacggcgtgctgtgcgcgcggctgggcgcgctgcggcgc
ggcgcgctggcgctggccgagcgcgaggcgcaagagcgcgcgctgcgccggcccagcgtc
gccgccgcgctgcgcctcaagcccaacaatctcccagcggacgcgtcatcacccgcggat
tactaccccgcgttgctggagctagtccgcggcgtcctcgacggcaacacggaggccacg
gcgtacgaggacgccgcgcgggagatgttcggcatacacgcgtaccccgcctacacgctc
gacaagctcgtgtggaacgccgtgcgacagctacaacgctgcgtgtcggagccctggtcc
ctgcgcgcggcggagctggcggcgcgcggcggcatgcgcggcgcgctgtcctacgtgagg
agagcgcagcgcttcttacataaggaacacacagcttttcttatcaaactgtacggtggc
gacgagtgccgtgtgtccttcgagttgctggagagcggaggagaagggcgggcgtctccg
aacaatgactcttcgcggttgtcgcctaccaatcagtcgcgggcgtccgcgccgaacggg
tctccggtgtcccggctggcggcgtggtcgctgtacacggagcgctactcgcgccccgac
ctgcgcgcggcgtccgcgcccaacaagcccgtgttcctcgcgcgcaacgccgcgcgctgc
gggggctccggccacaacgtggcgcccggcgactgcggcgccgcacacgccgcgcgcggc
aagaggaaaccgcaccggatcgtcgacaggagcgagtgcacgctcagcagcgggatcaga
ctggtagcgtcccgtcctcaccacttgtaccgcgcgggggcgctagcggcggccaaggcc
tcgcacgagaggctccacgcggcgcgccgggccaagttcaagacgtggctccaagggaac
gcttaccgatga
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