Leguminivora glycinivorella (soybean pod borer): 125238901
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Entry
125238901 CDS
T09956
Name
(RefSeq) LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgly03036
]
125238901
Enzymes [BR:
lgly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
125238901
Chromosome and associated proteins [BR:
lgly03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125238901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Motif
Other DBs
NCBI-GeneID:
125238901
NCBI-ProteinID:
XP_048002345
LinkDB
All DBs
Position
24:complement(3395302..3403812)
Genome browser
AA seq
1806 aa
AA seq
DB search
MEPDCYLVEVIHYQNPHLIWVRNPTTDTMEQVGVYGVVPLDKELMLDTQEIEIKRSNTWM
QAATVVMMKVFSEATAVWFEPIYIHRRTSIFDTNIHKYGELLIQKNDGKKRKLSGYLTKS
QTALYDDAAFHQQLSSGLIQTKLSKTETDEVMKIITSKLKDYESVVSFKKQTEVYQVAKK
LEELTTENLNKHNSRLNKNVTNKDIFNILDRKFKDFQLCKDLDDEPQGRASKKTKTSDSS
SSRLDKLKRLSVKNNVPKYDDFNDAKPDNTPHDDYDDTKANYNQNQSNHSNQRNVAKPGV
AAYHDDSSVTKEEESSESFQPRRNFKNKKYKSSSNKPPEYDVKTQMRIAYSPPGVDKMKL
ALKIVPIIPIEEHNDTKTPYLPTVSKEDETDVKTPKDDMYGEVDSRVNIAITNKDTLKKY
YDLNVNKPVVAHKDTYYTDSHGDNYNKRSTVDAQKQNNNFTYHDTGKDELKIIEQNNEGK
AMSDVSTSDGSANVLTSKLLQKRLNAMKIVKKDSSSSSNTTSSTENAKKNESSSLNTTSK
DSDDEEVNELIEKYTATLKATVEIAEMKDKTVDVVAKKNNVNPFQNVDPNLSVFVDKLIK
PVLMVHTKNNSRIEPMVALSDIPFNTHVHNILRNMNVEQAMTMQSVSWMSVLRGYSTFLI
GPQACGKTMGYLPSICRLISDFDNDIVNSVGPTCIIVAATAQSVSDIEYKCRMLLGTKEK
IFSCYAGMDLLKITTSLLNGCNLFICTPCVLVRLLLQTDFGLDLRRLTTFVLDDCERLEE
VYKNEIKIALSKIKHMLKARVNKEVKVQYILASRVWCDFMEPLAKKAPNTVICIGAFQEC
VLYSKANTTVDFVKPENKIAKVLDFVQKMDXKKKTIVVCRTDEEVTELVKILKEKHPVVY
ACNNEMTVEELRNFNLTWDQYADPTIGPILVCCDGNLSHMNITDAHNLVHYSMPELFSRF
CKRFSVLNDHYPSIFKEENEGVAIRIILEKSNAEQLPKICNFIKRCTKEFPQDLDVICKE
ILHRKDMAKAAKLVPICGNILTLGDCPDFWYCRERHTSSQTHDEPVEWMPTEGVITFRIL
HYQSAVTYSIRLLSNVKKGGTKKYPQTFNTLAFKMGTYFSQESNKKLLGVPKIGDICAVA
INQDFYVRCQVVDIINNYRNGLPNHVLIKLIDEEKLETARDIYLYHLPKEFRDVETYVAQ
VSLAGVLPKDKDITFSELAKNHIKKGLENNETLYMRGKIVLTIGNRIFVDNIDVCQDLTS
MNEVVVKNNFKEMLSAHSEPFPDHIKKIKSRLFAEEEVITETTDFEQVEEIKPVKELPKV
QWAHLNRDDLSLVYFTSAVDPSTFFVRLVKFTDTMESLCKDIKRYTEGNPEPLRKVKEKD
IVLAKFPDNKCYERARVDFVEDSKAKCFFVDYGDWRDVPLKDLTEIPDKFVLRLPFQAIE
CRLLGVRPVGDAWSDFSTNWLCDRCDVDXRPRLKSLYVKYYSTDKAKFTGGNKYAVALID
TNGDSDVVYNTQMINLNLAAPDEEEIEILNSMNFVRPEEKKESRDEDWSNDAYDKTKDSN
GPIRSVPLVEDSDTDSDRWSVNMPDEIVNTFKPDARSIEMPKIKSDASSIASSNRIDNDS
VTSEYEVVKKPQIRELDSDDLSTSESASVTEKSELIKEVNEGRKPKLLWRQNKTTVTVKI
MIVGAESYELKIKERELHFSADIYDTMYNFNISLYGIVDKNKSSHAYKGQYILVKLFKVM
QKNWLTLSKNDSLAKWIVYDHDSIDTSSEEEDALDDSRAKVIKNNYRQDDSDSDSFCDDV
SMNYPS
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgattgctatcttgtggaagtgatccactatcaaaatccccatttaatttgg
gttcgtaacccgacgaccgacaccatggaacaagttggtgtttacggagtcgttcctctg
gataaagaactgatgctggatactcaggagatagagataaagcgtagcaacacttggatg
caggcggctactgtcgttatgatgaaagttttctcggaagctactgcggtgtggtttgag
ccgatttatatacatcgaagaacctcaatctttgacaccaacatacataaatatggtgag
ctgttaatacagaaaaatgatggaaagaaaagaaaactctccggctatctcacaaaatca
caaacagctctatatgatgatgctgctttccatcaacaactaagttcagggctcatacag
acaaaactgtcaaaaacagaaacagatgaagtgatgaaaattatcactagcaaactgaaa
gattacgaatctgtcgtctcatttaagaagcaaactgaggtataccaagtagctaagaag
ttagaagaactaactacagaaaacttgaacaaacataacagtagactaaataagaatgtc
accaataaagacattttcaatatcctggacaggaagtttaaagacttccaactgtgtaaa
gatcttgacgacgaacctcaaggaagagctagtaagaagaccaaaacatctgacagttca
tcttcacgtcttgacaaacttaagagacttagtgtcaaaaataatgttcccaaatatgat
gactttaatgatgcaaaacctgataatacacctcatgatgactatgatgatactaaagct
aattacaatcagaaccagagtaatcatagtaatcagagaaatgtagctaagccaggagtt
gcagcttatcatgatgacagttctgtgacaaaagaagaagagagcagtgagagtttccaa
cccaggaggaatttcaaaaacaagaaatacaaatcttcaagtaataaaccacctgaatat
gatgtgaaaacacaaatgcgcatagcatatagcccaccaggggtagacaagatgaaactt
gccctaaaaatagtaccaatcatacccattgaagaacataatgatactaaaactccttat
ttgccaactgtgtccaaagaagatgaaacagatgtgaagacgccaaaagatgacatgtat
ggtgaggttgattctcgtgttaacattgctattacaaataaagataccttgaaaaagtac
tatgatttaaatgtcaataaacctgtagtagcacacaaagatacttactatacagattcc
catggagacaattataataaaagatcaactgtagatgcacaaaaacaaaacaataatttt
acctatcatgatactggcaaagacgaacttaaaattatagaacagaataatgaaggaaaa
gccatgtctgatgtttcaacaagtgatggaagtgctaatgtcttaacatccaaactccta
caaaaaaggcttaatgctatgaaaattgtgaagaaggatagtagttcatcttcaaatacc
accagcagtacagaaaacgcgaaaaaaaatgaaagcagttcacttaacacaactagcaag
gactcagatgatgaagaagtgaatgaactcattgaaaaatatacggctactcttaaagct
actgttgaaattgcagaaatgaaagataagactgttgatgtagttgctaagaaaaataat
gtcaacccatttcaaaatgtagatccaaacctatctgtgtttgtagataaattgataaaa
cctgtactcatggtgcatactaaaaacaattctcgaattgagcccatggttgcgttaagt
gacataccgtttaacacccatgtgcataatatacttaggaatatgaatgttgaacaagcg
atgaccatgcagtcggtgtcatggatgagtgttctcagggggtacagcaccttcctgatt
ggcccacaagcgtgtggaaaaaccatgggatatttaccatcaatatgccgattaatatca
gattttgataatgatattgtgaacagtgtcggtcctacttgcatcatagtggcagccact
gcccagtccgtctctgatatcgagtataagtgtaggatgctccttggcactaaagaaaag
attttctcctgctacgctggtatggacttattgaaaatcaccacatctttgctaaacggg
tgcaatctcttcatatgcacgccttgcgtcttagtcagactgttactacaaacagacttc
ggtttagatctacgtcgtttgaccactttcgtacttgacgattgcgagagacttgaagaa
gtctacaaaaatgagataaaaatagctttatctaaaatcaagcacatgctgaaagcaaga
gtcaataaagaggtgaaagtccagtacattctggcttctagagtgtggtgtgattttatg
gagccactggccaagaaagcaccaaacacagtaatttgcataggcgccttccaagagtgt
gtactttactccaaagccaacactactgttgattttgtaaaacctgaaaacaaaatcgcc
aaagtgctggattttgtgcaaaaaatggatnaaaaaaagaaaactattgtagtctgtcgg
acagacgaagaagtaactgaactcgtaaagattttaaaagaaaaacatccagtggtgtac
gcttgcaataatgaaatgacggttgaagagctgaggaattttaatctgacatgggaccaa
tatgccgatcctaccattggtcctattctcgtttgttgcgatgggaacttgagtcatatg
aacatcactgatgctcacaacctggtccattattctatgccagaactgttctctaggttc
tgcaagcgcttttctgtgctaaacgaccattacccttctatatttaaagaggaaaatgaa
ggtgtggctataagaatcatactagaaaagagtaatgcagaacaacttccgaaaatctgc
aacttcatcaaacgatgcaccaaagaattccctcaagatctggatgtcatctgcaaagaa
attttgcacagaaaagacatggctaaagctgcaaagcttgtgcccatctgtggaaatatc
ctgacattgggagattgccctgacttctggtattgcagagaaagacacacgagttcgcaa
actcatgatgagcctgtggaatggatgccgactgaaggtgtgatcacttttaggattttg
cactaccagagcgcagttacgtactctattcgtttactgtccaacgtaaagaaaggaggc
accaaaaagtaccctcaaaccttcaatacactcgcctttaagatgggaacatactttagc
caggaaagtaataagaaacttcttggcgttccaaagataggcgatatctgcgcagtggct
ataaaccaagacttctacgtgagatgccaagtcgtcgacataataaataattacagaaac
ggtctgccaaaccacgtattaataaaactcattgatgaagaaaagctggagaccgcgcgg
gatatctacctgtaccatctaccgaaagaatttagggacgttgaaacttatgtcgctcaa
gtgagcttagcaggcgtcctaccaaaagacaaagacataacgttttctgaactggctaaa
aaccatatcaagaaaggcttggaaaacaatgaaaccttgtacatgagaggcaagattgtc
ctgacaatcgggaaccggatattcgtcgacaacattgatgtgtgtcaagacttgacgtct
atgaacgaggtggtggtcaaaaacaacttcaaagaaatgttgtcggcgcattcggaaccg
ttccctgatcatattaagaaaataaagagccgcctgtttgccgaagaagaagtgattaca
gagaccacagattttgaacaagttgaagagataaagccagtaaaagaactgcctaaagtg
cagtgggcgcatttgaatcgcgatgacctatcgttggtctattttacatcagctgttgat
cccagcacgtttttcgtccgtttggtcaaatttacagacaccatggaatccctttgcaaa
gatatcaaaaggtacacagaaggtaaccctgagccactgagaaaagtcaaggagaaagac
atagttttggctaaatttccggacaataaatgctacgagcgagctcgagtagactttgtt
gaagacagtaaagcgaaatgctttttcgtcgactatggagactggagggatgtgccttta
aaagatttgacggaaatccctgacaaattcgtacttcgtttgcctttccaagcgatagaa
tgcagactactgggtgtgagacctgtgggcgatgcatggtcagactttagcaccaactgg
ctttgcgaccgatgtgacgtggatngacgaccaagacttaaaagtctttacgttaaatac
tactcgactgacaaagccaaattcaccggaggaaacaaatatgcagtagcattaatagat
accaacggtgacagtgacgttgtatataatacgcagatgatcaatcttaacttagcggct
ccagatgaggaagagatcgagatactcaatagcatgaatttcgtaagacctgaggagaaa
aaagaatctcgtgatgaagactggagtaacgatgcttacgataaaactaaagattctaat
ggaccaatccggtcggtgcctttagtagaagatagtgacactgacagtgatagatggagc
gtaaacatgccagatgagattgttaacactttcaaacctgatgcaagatctatagaaatg
cccaaaataaaatcagacgcgtcttcaatagccagttccaacagaatcgacaatgattct
gtcacaagcgaatatgaagttgtgaaaaagccacaaattagagaattagattctgacgat
ctgtctacttctgaaagcgcaagcgtaactgagaagtcagaattaattaaagaagtaaac
gagggtagaaaaccaaaattactgtggagacaaaataaaacgacagtcacagtgaaaata
atgatagtaggagccgaaagttacgaattgaaaataaaagaaagagaattacatttctca
gcagacatttatgacacaatgtacaatttcaatataagtttatatggtatcgttgataaa
aataagtcttcacatgcttataaagggcagtacatacttgtgaaactttttaaggttatg
caaaagaactggttgaccttgagtaaaaatgattctttagcgaagtggattgtctatgac
cacgattccatagacacttcttcagaagaggaggatgcgttagacgattctagggcgaag
gttataaagaataattaccgtcaagacgattcggatagcgattcgttttgcgatgatgtt
agtatgaattatcctagttag
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