Leguminivora glycinivorella (soybean pod borer): 125239053
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Entry
125239053 CDS
T09956
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgly03036
]
125239053
Chromosome and associated proteins [BR:
lgly03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125239053
microRNA pathway
RISC loading complex
125239053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
Dicer_platform
PAZ
Helicase_C
Dicer_PBD
Motif
Other DBs
NCBI-GeneID:
125239053
NCBI-ProteinID:
XP_048002466
LinkDB
All DBs
Position
25:3529075..3616010
Genome browser
AA seq
2454 aa
AA seq
DB search
MAEGNWSRFTAAEGGARLASAARTRNTIAAELTAFTSTRLLHEEAHEIRGLYSTGKKRSV
FVTRASRVPCASYELRILTDLAVVSASDYGDIEDWRQEVEDKEVIVCTSSVFRQLLEDGI
LAMTRVNVLVVDSCHRVHTDPDLQTIMDIYKSSPSQPRVLGLTYPLFPARRVDPDAGTPD
EKEEPSAKQIENKQDFGVCENVDDFEMYSKLEWNIRRLEERLCSQMDLAEDMDNGKRFTG
APCKPKELIIEYSVTRPVCPDYEELDSFMRHAVGDVAGFLEEHRYDPTEIYGEDLYEEFI
NIPNPTIDPKLIFKQFFYVLDELGPYGADKAAFSLLTKLEKLKIKVPYERHFLLLCLCTT
VLVKIRCYADLMFSKYSDLDRITTFSTPKVLRFIEILAQFESNDNENDKSEDKAITEKGN
DEKTDENSKTADEVITDKNQINNENQNDRTDDNNENNKTANEAITDETQIKNETQTETDV
SKDNIKVTLNGYINNEEETNGHKNPTKKMLYDIEKCDFVTLSNKIEDKVNTYEANLKEIH
DLSIDFNQLDVNKKDNTKTDIIEVTEAKSTEIQLSNPKIEVTEVKTELDLTDPRSLLFPR
RLHRIRGRGRVQRNIVRNQQAQMNPDALCGIVFMNEPIMAKIMFLVVVDLSRFEPRLSGV
SAQYVASGGAADTAELRRHARAREDALKKFRMHDCNLLLATSALEEGIDLPRCNLVLRWD
MPASYRSHGLCRGRARAPRASCALLARAGHAQELLQHVAVYRELDQIISRKCGCGIQDEP
PQQEEDHADAFTALVIPYSPSSNLDKGDIVTDMPNNDKDDVYTPLANLEKDAKNDENNDD
VTTKVEDLNKTEVAIEILRKITDDKSNDANELKENNLKDIVESKIIEDDNDIKNNDGNES
NDNSKNRPKDSVVSNDNCIDNNSENVANYEENKLKEKSKVTEDNIKDNDEKESNAKEKSD
SVETKVSENRTRETNLECNKCNKVRTSVDKECCEVKKEDIASVDLSTAIALINRYCGKLP
SDTFTRLAPSYRTEKVSIRTPSGFQDAWVCTLRLPLNCPVKYNIVGHPMPTRVLARRMAA
LQACRILHKSGELDDNLMPIGKENFKAGELEACAEADARPGTTKRRQYYYKRTARAFTNC
EPIVDTTDEQLAEETDGHTETITSSNVLYAISCTLWCALPERYNTRGRRLHAPQLAKQAC
GVLMRVHQPDRLQIPSFPVYTRSGEVRVTVAPAANADTRLSPRRKQLITRFMRFVFADVL
RVRRRGMTLEPESCTHNNYYVVPTVKVNNPDGSTKVDIDWKFLEQIYQYTEEKAHAELEK
PVLWAEEGKNEEKRPGGGEVWVKKGDEAKSENQDKRKVKKMDNPLLKPGEIFVFDPEKYR
EAVVTPWYRNQDQPQFFLVAEICSNLTPDSEFPSDTHTSFRDYYKSKYGVALTQSNQPLL
DVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRDRLDQKQILVPELCTVHPFAAPLW
FATVALPCVLYRINALLIADEIRRSVAAGVALGVPRVGPGFEWPPLDFGWSLAEVLSADS
EKNDKKKEAEDEVKEEHEELKKEKEEEQKETEEPKEKTINDILQEKEDAESGFEIGTWDN
DMASSIPEPPEFDEFLEPLPPNLTFCTSASGGANWCDPVQKPKSQFNPSRTFSMADSDCS
YMSSDFDTDDSDLNSEDSDDTDTSGFCSSKSNAAMGVRIEYKTAHEAEAVDVERRASHPA
PQPDPQDDAADLTLHAQAMGASDATDLTNARATDIDTECLQQFQKSVAEHEQEFIQKGLL
VPQDQPITDILPEPLKDCKKPEQIPPNELTTRFEQLFPYKNEFLNIEHGVLTLEAIEKNK
RKLLAEFKNSLSEEEIKKYTCFSMIDVDIDSPEYKNEKVANIGFDTMESYVEKVKGMGER
EFRPYYEDSKGNGKFDFDFQPNLEGHPGPSPSVILQALTMSNANDGINLERLETIGDSFL
KFAITAYLYCAHPTVHEGKLSHMRSKQVSNLNLYRLGLRKRLGARMIASKFEPHDNWLPP
CHKAPPAAHAPVDSEGGQEAPPAGCFIPYNLITQHSIPDKSIADCVEALIGAYLLECGPR
GALLFMAWLGIRVLPRHDVPLPHWPRDCQKKRSARKSRRESDSESSDEDDDDLPRPVGSL
PPYEENGQWFLPMFGALKAPPSPLLRYIADPEGELEQMLSGYDALERTLRYRFRDRSLLL
QALTHASHQRNRLTDCYQRLEFLGDAILDYLITRHLYEDPRRHSPGALTDLRSALVNNTI
FATLAARHGFHKYFRHMSPGLNEVLTRYVRIQEENGHSISEEHYLIHEDELEQAEDVEVP
KALGDLFESIAGAIFLDSGMSLAAVWGSYEQLMGAELEAFSAAAPKSPVRELLEAEPDTA
KFGKPERLADGRRVRVCVEVFGRGAFKGVGRNYRIAKGTAARCALRHLKRHKQH
NT seq
7365 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggcaactggtcccgtttcaccgcggcggagggtggcgcccggctggcgtcc
gcggcgcgcacgcgcaacaccatagcggccgagctgacggccttcacgtcaacgcgactg
ttgcatgaagaggctcatgagatcaggggactttattcaaccggaaagaagcgttctgtc
ttcgtaactcgagcgtcgcgagtcccttgcgcgtcatacgaactgcgcatactgaccgac
ctcgcagtagtcagtgccagtgattatggagacatagaggattggagacaggaggtcgag
gataaagaggtgatagtgtgcacatccagcgtcttccgtcaacttctagaagacggtatc
ctcgccatgaccagggtaaacgtgctggttgtggacagctgtcatcgtgtacacacagac
cctgacttacaaacgataatggacatctacaaatcaagtccatctcagccgcgggtgctg
ggcctgacttaccctctcttccccgcgaggagggtggaccccgatgcaggcactcctgat
gagaaggaggaaccaagtgccaaacaaatagagaacaagcaagatttcggcgtttgcgaa
aacgtagacgacttcgaaatgtacagcaaactggagtggaacatccgaaggctggaggaa
aggctctgcagccaaatggatctggctgaagacatggataacggaaaacggttcactggc
gccccctgcaagcccaaagaattgataatcgaatactcagtaacccgccccgtctgcccc
gactatgaggagttggactccttcatgagacacgccgtcggcgatgtcgcgggcttcttg
gaggagcacagatacgatccgacagagatctatggtgaagatctttacgaggagttcata
aacataccaaacccaacgatagaccctaagctgattttcaagcagttcttttacgttttg
gacgaactgggaccatacggcgccgacaaagcggcgttttccttactaaccaaactagag
aaactgaaaatcaaagtcccgtacgaaagacatttcctcctcctctgcctatgtaccaca
gttttagtcaaaatccggtgctacgctgacctaatgttctcaaaatactcggacctagat
agaatcactacattttctaccccaaaagtactgagattcatcgaaatattagcgcagttt
gaaagtaatgacaatgaaaatgataaaagtgaggataaagctataactgagaaaggtaat
gatgaaaagacagatgaaaatagcaaaactgccgatgaagttataacagataaaaatcaa
attaataatgaaaatcaaaatgatagaacagatgataataatgaaaataacaaaactgcc
aatgaagctattacagatgaaactcaaataaagaatgaaacacaaactgaaacagatgtg
agtaaagataatattaaagtaacattaaatggctacataaataacgaagaagaaacaaat
ggccataaaaatccaacgaaaaaaatgttatacgatatagaaaaatgcgatttcgtaaca
ctaagtaataaaatagaagataaagttaacacttacgaagcaaacttgaaagaaatacac
gatttaagtatagattttaatcaactcgatgttaacaaaaaagataatactaaaacagac
attatagaagttacagaagctaaatctactgaaatacaactttctaaccctaaaatagaa
gtcacagaggtgaaaactgaactagatctaacagatccaaggtctttgttatttccaagg
cgtttgcataggatccgaggcaggggaagggttcaaaggaacatagtacggaaccagcag
gctcaaatgaaccctgatgcgttatgtggtatcgtttttatgaacgagcctataatggcg
aagataatgttcctggtggttgtggacctgtcccggttcgaaccccgtctctccggtgtg
agcgcgcagtatgtggcgagcggcggcgcggcggacactgccgagttgaggaggcatgcg
cgggcgcgggaggatgccttgaaaaagttccgaatgcacgactgcaacctgctgctggcc
acgtcagcactggaggagggcattgacctcccgcgctgcaacctcgtgctgcgttgggac
atgccagcatcttatcgctcgcacgggttgtgccgcggccgcgcccgcgcgccgcgcgcg
tcgtgcgcgctgctggcacgcgcggggcacgcacaagaactgctgcagcacgtagccgtt
tatagagaattggaccagatcataagtcgcaaatgcggctgcggaattcaggacgagcct
ccgcagcaagaagaagatcatgcagacgccttcactgcgctcgtgattccttattcaccc
tcttccaacttagacaaaggagatatagtaacagacatgcccaataatgataaagatgat
gtttatacacccttagctaacttagaaaaagatgctaagaatgatgaaaacaatgatgat
gttactaccaaagttgaagatctaaacaaaacagaagtagctattgagatactaaggaaa
ataactgatgataaaagtaatgatgcaaatgagttaaaagaaaacaatctcaaggatatt
gttgaatccaaaataattgaagatgataatgatattaaaaataacgatggaaacgaatca
aatgacaattcaaaaaacagacccaaagatagtgttgtatcgaatgataattgtattgat
aataatagtgaaaatgttgcaaattatgaagaaaataaactcaaagaaaaatcaaaagta
actgaagataatattaaagacaatgatgagaaggaatcaaatgcaaaagaaaagtcagat
agtgttgaaactaaagttagtgaaaatagaactagagaaacaaatttagagtgtaataag
tgtaataaggtacggactagtgttgataaagagtgttgtgaagtcaagaaagaagatatt
gcaagtgtggacctgagtactgctattgctttgattaatagatactgcggcaaactaccc
tcggacacattcacccgcctcgccccgtcgtaccgaacagaaaaagtcagtatacggacc
ccttccggatttcaagacgcttgggtgtgcaccctaaggctgccactcaactgtcctgtc
aaatacaacattgtgggtcacccgatgcctacaagagtgctggcccgaagaatggcggca
ttgcaagcttgtcgcatactacacaagtctggggaactcgacgataatcttatgcctata
ggcaaggagaacttcaaggcgggcgagttagaagcttgtgccgaggcggacgcgaggcct
ggcaccacgaagaggcggcaatactattacaaaagaactgcacgtgccttcacaaactgc
gagcccatcgtggatacaaccgatgagcagttagcggaagagacagacggacacacagag
acaattacaagtagtaacgtgctatacgcgatatcttgcaccctctggtgcgcactaccc
gagcgatacaacactaggggaaggaggctgcacgccccacagctagcgaagcaagcgtgt
ggcgtgctcatgagagttcaccagcctgacagattacaaattccatcgttcccggtatac
acgcgttctggcgaagtgcgggtaactgtagcccccgccgccaacgccgatactagactc
agcccgagacgaaaacaactcatcactaggttcatgcgcttcgtcttcgcggatgtgctg
cgcgtgcgccgccgcggcatgacgctcgagccggagtcttgcacgcacaataactactac
gtcgtgcctactgttaaagtaaacaacccagatggcagcaccaaagtggatatcgactgg
aagttcctggagcaaatataccagtacacggaagagaaggcccacgcggagctggagaaa
ccggtgctctgggccgaagaggggaagaacgaggaaaaacggccaggggggggcgaagta
tgggtgaagaagggtgatgaagctaaatcagaaaaccaggataagaggaaagtgaagaag
atggataaccccctgctgaagccgggagaaatcttcgtattcgaccctgagaaatacagg
gaggcggtcgtcacaccctggtaccggaatcaggaccaacctcagttcttcctagtggcc
gaaatatgttccaacctgaccccagactcggaattcccgtcggacacacacacaagcttc
cgtgactactacaagagcaaatatggcgtcgcactcacacagtcaaaccagccgttgcta
gacgtggaccacactagcgcccggctcaatctactcacacccagatacgtgaaccgtaag
ggcgtagctctgcccgtctcctcggagcgtacgcggcgcgccaaacgcgaccgtctagat
cagaagcagatattggtaccggagctatgcaccgtgcaccccttcgccgcgcccctgtgg
ttcgccacggtagctctaccctgtgtactttatagaatcaacgccctactaatagcagac
gagatacgacgaagcgttgcggccggggtcgctttaggggtcccaagagtgggtccaggg
ttcgagtggccaccacttgacttcggatggagcctggctgaggtgctaagcgcggactcc
gagaaaaacgataaaaagaaagaagcagaagatgaagtaaaagaggaacacgaggaattg
aagaaggagaaagaagaagaacagaaggagacagaagaaccgaaggagaagaccattaat
gatattctgcaggaaaaggaggatgccgagagcggtttcgagatcggcacatgggacaac
gatatggcgtcgtctatcccggaaccgccggaattcgacgagtttctagaaccgctgcct
cctaatctgaccttctgcacttccgcttccggcggtgcaaactggtgtgatccggttcag
aagccgaagagccagttcaatccttctagaaccttctccatggctgacagcgattgctct
tacatgtccagtgacttcgacacggatgattcggacctcaactctgaagacagcgatgat
actgacaccagcgggttctgtagcagtaaaagcaatgcggctatgggcgtccgaatagaa
tacaagaccgcccacgaggctgaggctgtggacgtggagcgccgcgcgtcgcaccccgcg
ccgcaacctgacccgcaagatgacgccgcggatttgacgcttcacgcccaagccatgggc
gctagcgacgccactgacttgacaaacgcccgtgctaccgatatcgatacagagtgtcta
caacagttccaaaaatcagtcgccgagcacgaacaagaattcatccagaaaggcctcctc
gtaccccaagaccagccaataacagacatcctacccgaaccgctaaaagattgcaaaaaa
cccgagcaaataccaccgaacgaattaacaacgagattcgaacaactattcccttataaa
aacgaatttttaaatatcgaacacggagttttaactctagaggctattgagaaaaataaa
agaaaattactggctgaatttaaaaatagtttgtcggaagaagaaattaaaaagtatact
tgtttctctatgatcgatgtcgatatagactcgccggagtataagaatgagaaagttgca
aatatagggtttgatactatggagagttatgttgagaaagtgaaggggatgggtgagagg
gaatttagaccgtattatgaggacagtaagggtaatgggaagtttgacttcgattttcag
ccgaatttggagggacacccggggcccagtcctagtgtcattttacaggcgcttacgatg
tcaaacgcgaacgacggaattaaccttgaacggctggaaacaatcggagacagtttccta
aagttcgccataacagcatacttgtactgcgcgcaccctaccgtgcatgaagggaaactc
agtcatatgaggagtaaacaggtgtcaaacttgaacctgtaccgcctggggctgcgcaag
cgtctcggcgcgcgaatgatcgcgtccaagttcgaaccccacgacaactggctgccaccc
tgccacaaagctccgccggccgcccacgcccctgtggactccgaaggaggacaggaggcg
ccccctgccggctgtttcatcccttacaacctcatcacgcaacacagcataccagataaa
tcaatagcggactgcgtggaagccctaataggagcgtacctgctggagtgcggtccccgc
ggggctctgctcttcatggcgtggctcggcatacgggtgctgccgcgacatgacgtgccc
ctgccgcactggccgcgggactgccagaagaaaaggtcagcccggaagtcacgtcgggaa
tcagattccgagtcatcagatgaagatgatgatgatcttcccagaccggtcggctccctg
ccgccttacgaagaaaacggacagtggttcctgccgatgtttggtgcgctgaaggcgcca
ccgtcgccgttgttgcgttacatcgccgaccctgaaggcgagcttgagcaaatgttatcc
ggctatgacgcattggagcggacgctccgctaccgcttcagagatcgctctctcctcctg
caggcgttaacgcacgcgtcgcaccagaggaacaggctgacagactgctaccagcggctc
gagttcctaggagacgctattttagattatttaataacgcggcacctctacgaagacccg
cgcaggcactcgcccggagccctgaccgatctccgctccgcgcttgtgaataacaccata
ttcgctactctcgcggcccgacacggattccacaagtacttccgtcacatgtctcccggt
ctcaacgaggtgctgacccgctacgtcagaatacaagaagagaacggccactccatcagc
gaggagcactacctgatacacgaagatgaattagagcaggcagaggacgtggaggtccct
aaggccctaggagacctctttgagtccatagcgggtgccatatttttagactccggcatg
tcgctagcggcggtgtggggctcctacgaacagttaatgggtgcggagctcgaagcgttc
tcggccgccgcgccgaagtcccccgtgagggagcttttggaagctgaacccgacaccgct
aaattcggcaaaccagagcgcctggcggacggcagacgagtccgcgtctgcgtggaagtg
ttcgggcgcggcgccttcaagggcgtcggccgcaactacaggatcgccaagggcacggcc
gcccgctgcgctctgcggcatcttaagaggcacaagcaacactga
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