KEGG   Leguminivora glycinivorella (soybean pod borer): 125239355
Entry
125239355         CDS       T09956                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
lgly  Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03018  RNA degradation
lgly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lgly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125239355
  09123 Folding, sorting and degradation
   03018 RNA degradation
    125239355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgly03019]
    125239355
   03041 Spliceosome [BR:lgly03041]
    125239355
Messenger RNA biogenesis [BR:lgly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     125239355
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     125239355
Spliceosome [BR:lgly03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    125239355
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 125239355
NCBI-ProteinID: XP_048002868
LinkDB
Position
25:1135071..1137909
AA seq 134 aa
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEETQVKSRGLREVSKGRGGNMRARGAARGAFGARRPAPPP
TRQPNQQPRPMKKK
NT seq 405 nt   +upstreamnt  +downstreamnt
atgctcccattatcgttactgcggaccgctcaaaaccatccaatgctcgtagaacttaaa
aatggcgagacgtacaacggtcatctggtttcttgcgataactggatgaatatcaacttg
agagaagttatttgcacatcacgagatggcgacaagttttggaggatgccagagtgctat
attcgaggctccacgatcaaatacttacgtattcctgacgaagttattgatatggttaag
gaagaaactcaagtgaagtcccgcggcctccgtgaagtgtcgaaaggtcgcggcggcaac
atgcgcgcgcgcggcgccgcccgcggggccttcggcgcgcgccgccccgcgccgcctccc
acgaggcagcccaaccagcaaccccggcccatgaagaagaagtag

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