Leguminivora glycinivorella (soybean pod borer): 125240608
Help
Entry
125240608 CDS
T09956
Name
(RefSeq) ATP-dependent helicase brm
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125240608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgly03021
]
125240608
03036 Chromosome and associated proteins [BR:
lgly03036
]
125240608
Transcription machinery [BR:
lgly03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125240608
Chromosome and associated proteins [BR:
lgly03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
125240608
Chromatin remodeling factors
BAF complex
125240608
PBAF complex
125240608
GBAF(ncBAF) complex
125240608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
BRK
SnAC
ResIII
QLQ
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
125240608
NCBI-ProteinID:
XP_048004525
LinkDB
All DBs
Position
Z:complement(10294528..10372617)
Genome browser
AA seq
1669 aa
AA seq
DB search
MASPSPQSSPMPPPQAPSPMGPPTQSPAPPQSPHSPYNQQHVNGPPTPHQAGAPQGQMSN
HMSPGPAPHPIASNSNGPPQQHPGMPPNSHQMPPHMVGGHMGSPGHAMPTGSHPSGPNGL
AMPGGAQHPSMPGQGPPHGYMQHQIGHMAPGQAPMAMGGGAPPPGNGPAGPAGVPLPPHG
LPAGAPGHMPHHGLMAGQGPPPHSPAGPGYAAHGPAAPGTPPNQPSPSQPPAAPQHPPSA
QTPPHQGAPPSTSSNGASSSSPMQGSMATPGPDNLHALQRAIDSMEEKGLQEDPRYSQLL
ALRARSNAQDPSKGLFSNNQLSQLKAQIAAYRNLARNQPVSQQIALMAAGKRTGDTPPEC
PTPPAQPPSPYSQQGQGQGQPAGKGAAGDTARGGGGAPPTPLPMTGQMAPPTQPTPPLVN
PPMGQGAPRGAAPVRPPGPGNAAAPTSQQPGAPTPGAKQNRITSIPKPVGIDPLQILNER
ENRIAARIAHRMDVLSNLPANISDDLRLQAQIELRALRVLNFQKQLRAEILGQVRRDTTL
ETAVNIKAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLQTVLQHAKDFKEYH
RNNQAKLSRMNKAIMNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRL
AFLLSQTDEYIASLTEMVKQHKQEQRKKQQEEERRKRKSRKKKLLEGGEIDALDDSSQTS
DSRVSVMDPKTGEVLKGEEAPLLSQLKDWMEAHPGWEVLSDSEDSGDDSDDEKRERKEKH
RDERSDKEKTEEEKARDMIKKAKVEDDEYKTEEQTYYSIAHTVHESVTEQASILVNGNLK
EYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTL
SNWVLEFEKWAPTVVVVSYKGSPQSRRLVQNQMRSTKFNVLLTTYEYVIKDKGWLSKLQW
KYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKS
CSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYI
IKCDMSGLQRVLYKHMQSKGVLLTDGSEKGNKGKGGAKALMNTIVQLRKLCNHPFMFQHI
EEKFCDHIGTGGGVVSGPDLYRVSGKFELLDRILPKLKQTGHRVLVFCQMTQCMTIIEDY
LSWRAFQYLRLDGMTKAEDRGDLLKKFNDVDSEYFIFLLSTRAGGLGLNLQSADTVIIFD
SDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFD
QKSTGSERQQFLQSILHQDGDDEEEENEVPDDDLINEMIARSEEELEIFKQIDIERRKTE
TQSRLIDESELPDWLVKNDDEVVCNKGQSWSFVDEDEILGRGSRQRKEVDYTDSLTEKEW
LKAIDDEFEDEEDDEDDDEVLDKKRKKGRKRRRQEDSDEEDTPSSSKKKNKTETNQLKRT
LKNVMKKVIDFTDESGRVLSEPFMKLPSRRELPDYYDIIKKPLDIKKILNRIEDGKYNEL
ADLERDFFTLCSNAQAYNDDLSLIYADSVRLRTAFIEIRRRCDAGQLSEDSEEEKAPSAA
AGEEEEESDEESSRSVKMKIKLKGKSKGTPGRKRKPRKYISDDEDFEVD
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggctagtccgtctcctcagagcagtccaatgcccccgccccaggcgccaagtcctatg
gggccgcctacacaaagcccggcacctcctcagtcgcctcacagcccgtacaaccagcag
catgtaaacgggccaccgacaccgcatcaggcgggggctcctcagggccagatgtcgaac
cacatgtcgcccgggccggcgcctcacccaattgcgtctaattcaaacgggcccccgcag
caacatcccggcatgcctcctaactcgcatcagatgccgcctcatatggttggcgggcat
atgggcagtccgggacacgccatgcccactggctcgcatccctctggtcctaatgggttg
gccatgcctggaggagcacagcatcccagcatgcctgggcaaggccctccccatggatac
atgcagcatcaaattgggcatatggctccaggacaggcaccgatggctatgggcggtggt
gctccgccaccaggcaacggtcccgcggggccagccggcgtcccactgccgccgcacggg
ctgccggccggcgcgcccggccacatgccgcaccacggcctcatggccggccagggcccg
ccgccgcactcgcccgccgggcccggctacgcggcgcacgggcccgctgcgcccggcacg
ccgcccaaccagccctcgccatcgcagccccccgccgcgccgcagcacccgccctcggcg
cagactcctccgcatcagggcgcccctccctccacctcctccaacggcgcgtcctcctcc
tcgcccatgcaaggctccatggcgacgcctggtccagataacttacacgcgttgcagcgc
gccatcgattctatggaagagaaggggctacaggaagacccgcggtactcgcagcttctc
gctcttagagctagatcaaacgctcaggaccctagtaagggtctgttctctaacaaccag
ctgagccaactcaaggcccaaatagcagcatacagaaacctggcacgcaaccagcccgtg
tcgcagcagatcgctctcatggcagccggcaagcgcacgggagacacgccgccggagtgc
cccacgccgccagcgcagccgccgtcgccgtacagccagcaggggcagggacaaggccag
cccgcgggcaagggcgcggcgggcgacaccgcgcgcggaggcggaggggcgccgccgaca
cccttgcctatgaccgggcagatggcgccgcctactcaacctacaccgccgctggttaac
ccgccaatgggccaaggagcgcctcgaggtgcggcgcctgtcagaccgccgggcccgggc
aacgccgccgctcccaccagtcaacagcccggtgcgcccactcctggtgcgaaacaaaat
cgcatcacgagcatacccaagcccgtgggaatcgacccgttgcaaatcctcaacgaaaga
gaaaacagaattgccgctcgtattgcgcatcggatggatgtgttgtccaacttgccggcc
aacatatcggacgacctgcggctgcaggcacagatcgagctgagagcgctgcgcgtgctc
aacttccagaaacaactgagggctgagatcctcggccaagtccgccgcgacacaacgtta
gaaacagctgtgaacatcaaggcgtacaaacgtacgaagagacaaggtcttcgcgaggcg
cgtgccacggagaagctggagaaacaacagaagctcgaggccgaacgcaagcgtcgtcag
aagcaccaggagttcttgcagactgtgctgcagcatgccaaagacttcaaggagtaccat
cgcaacaaccaggccaagctgtctcgcatgaacaaggcgatcatgaactaccacgccaac
gccgagcgcgagcagaagaaggaacaggagcgcatagagaaggaacgtatgagacgtttg
atggcggaggacgaagagggttaccgcaagcttatcgatcagaagaaagacaagcgtctc
gcgttcctgctctctcagaccgacgagtacatcgccagcctcacggagatggtcaagcag
cacaagcaggagcagaggaagaaacagcaagaagaagagcgtaggaagcggaaatcgcga
aagaaaaagttgctggagggcggtgagattgacgctctggatgacagctcgcagacttcc
gactcaagggtcagcgtcatggaccccaagaccggcgaggtactgaaaggcgaggaggca
ccactactctcgcagctgaaggactggatggaggctcaccccggctgggaggtcctctcc
gactcggaggactcgggcgacgacagcgacgatgagaaacgcgaaaggaaagaaaagcac
cgcgacgaaaggagcgacaaggagaagacagaagaagaaaaggcgcgcgacatgatcaag
aaggccaaggtcgaggacgacgagtacaagacggaggagcagacctactacagcatcgcc
cacacggtacacgagtctgtcacagagcaagccagtatcctggtgaacgggaatctgaaa
gagtatcaaatcaagggtttggaatggctggtgtcgttgttcaacaacaacctgaacggc
atcctggccgacgagatgggtctcggcaagaccatccagaccatcgcgctggtcacttac
ctgatggagaagaagaaagtcaacgggccgttcctcattattgtgccgctcagtactcta
tcgaactgggtgctcgagttcgagaagtgggcgccaacggtggtagtcgtatcatacaag
ggctcaccgcagtcgcggcggctcgtgcagaaccagatgcgctcgaccaagttcaacgtg
ctgctcacaacctacgagtacgtcatcaaggacaagggctggctgtccaagctccaatgg
aagtacatgataatcgacgagggccaccgcatgaagaaccaccactgcaagctgacacaa
gttctgaacacgcactacatcgcgccgcaccgcctgctactcaccggcacgccgctgcag
aacaaactgcccgagctgtgggcgctgcttaacttcctgctgccgtccatcttcaagagc
tgctccacgttcgaacagtggttcaacgcgcccttcgccactaccggagagaaggtggaa
ctgaacgaggaagaaacgatcctcatcattcgccgtctgcacaaggtgctgcgtcccttc
ttactcagaaggctgaagaaggaggtggagagccagctgcccgacaaggtggaatacatc
atcaagtgcgacatgagcggcctacagcgggtcttgtacaagcacatgcagtctaagggc
gtgctactgacggacggctccgaaaagggcaacaagggcaagggcggcgccaaggcgctc
atgaacaccatcgtgcagctgcgcaagctgtgcaaccaccccttcatgttccagcacatc
gaggagaagttctgcgatcacatcggcaccggcggcggcgttgtgtccgggccggacctg
taccgagtgtcgggcaagttcgagctgctggaccggatcctgccgaagctgaagcagact
gggcacagggtgctggtgttctgtcagatgacgcagtgcatgaccatcatcgaggactac
ctgtcgtggagggccttccagtacttacggttggacggtatgacgaaggcggaggaccgt
ggcgacctgctcaagaagttcaatgacgtggactctgagtacttcatcttcttgctatct
acgcgtgctggcggtttgggtctcaacttgcagagcgctgacaccgtcatcatcttcgac
agcgattggaatccgcatcaggatttgcaagctcaagatcgagcgcatcgtatcggtcag
cggaacgaggtgcgagtactgcggctcatgaccgttaactccgtcgaggagagaatcttg
gctgcagcgaggtacaagttgaacatggacgagaaggtcatccaggctggtatgttcgat
caaaagtcgacgggctccgagcggcagcagttccttcagagcattcttcaccaagacggg
gacgatgaggaggaggagaacgaagtcccagacgatgacctgatcaacgagatgatagcg
cgctcggaagaggagctggagatattcaagcagatcgacatcgagcggcgcaagacggag
acgcagtcgcggctcatcgacgagtctgagctgcccgactggctggtcaagaacgatgat
gaggtcgtctgcaataagggccaaagctggagcttcgtcgacgaagacgagatcctcggc
cgcggctcccgccaacgcaaggaagtggactacacggactcgctcaccgagaaggagtgg
ctcaaggccatcgatgatgagttcgaggatgaagaagatgatgaggatgatgacgaggtg
ctcgacaagaagcggaagaagggccgcaaacgacgtcgccaagaggactctgacgaggag
gacacaccgagctcgtccaagaagaagaacaagaccgagaccaaccagctcaagaggacg
ctcaagaacgtcatgaagaaagtcatcgactttaccgacgagtcgggccgcgtgctgtcg
gagccgtttatgaagctgccgtctcggcgcgagctgcccgactactacgatatcatcaag
aagccgctcgacatcaagaagatcctcaacaggatcgaggatggaaagtacaacgagcta
gcggacctggagcgcgacttcttcacgctgtgctcgaacgcgcaggcgtacaacgacgac
ctgtcgctcatctacgcggactccgtgcggctgcgcaccgccttcatcgagatccgccgc
cgctgcgacgccggacagctgtccgaggactcggaggaagagaaagctccatcagcagca
gcgggagaagaggaggaggagtcagacgaagaatcgagccgctccgtcaaaatgaagatc
aaactcaagggcaagagcaagggcacgcccggccgcaagcgcaagcctcgcaagtacatc
tccgacgacgaagacttcgaggtggactag
DBGET
integrated database retrieval system
