Leguminivora glycinivorella (soybean pod borer): 125240736
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Entry
125240736 CDS
T09956
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125240736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgly03021
]
125240736
03036 Chromosome and associated proteins [BR:
lgly03036
]
125240736
Transcription machinery [BR:
lgly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125240736
Coactivators
SAGA/TFTC/STAGA complex
125240736
Chromosome and associated proteins [BR:
lgly03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125240736
STAGA complex
125240736
TFTC complex
125240736
SAGA complex
125240736
SLIK complex
125240736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
125240736
NCBI-ProteinID:
XP_048004738
LinkDB
All DBs
Position
Z:complement(18297048..18314032)
Genome browser
AA seq
660 aa
AA seq
DB search
MGDSDIVYGSTMSAESMKVIAESVGIATLSDDAAKDLSDDVSYRLKVIVQDAMKFMHHSK
RQKLSITDIDHALKAKNFEPQYGFVQPDSLPFRFASGGGRELHFIEEKEIDLNEILSAPP
PKIPLDVSLRAHWLSVDGVQPTVPENPPPLSKESQKLESVDPISKLSKPANKDAAGKPIC
GKAARLKASESVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRAEALQSLACDPGLHE
MLPRMCTFISEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELIPSVSTCIVS
RQLCLRPEMDNHWALRDFAARLMSQICKTFNTSTNNLQTRVTRLFAKALQCPSQTDNEPG
AGPSMANMKESEKTPLASLYGAIQGLAELGPEVVKVLILPRVRWLGERVEGALTGTGGAD
RLAAGNLKHQLLKVLAPVLRQLRQAPDQPDDYKREYGYLGPSLQQMVSKLRASPAGSAAG
GAVAVVTCTPPLLPPAPPAPHAPHASLASKTVDTLGPRNVMMSAGAGPQSPSPATPPPQK
FVIVSQPKPPQSQPASSAGLVAVHSSQPARTPHVQSVVVTSGPAGAAPPPQKLLVVGLPP
APASAPAAAAAAPPPAHSPAVASSSQVSQAPVSVVAKPVFARGGSAPQPPPELDDLSHLA
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgggagactccgacattgtttacgggtcgactatgtcggcagagtctatgaaggtgatt
gctgaaagtgtaggcatagcgaccctcagtgacgatgctgctaaagatctcagtgatgat
gtatcatatcgtctcaaagttatcgtacaggacgctatgaagtttatgcatcactccaaa
cgacaaaagctatcaatcacggatattgatcatgcactcaaggcaaaaaatttcgagccc
caatatggatttgttcagcctgattcattacccttcagatttgcatctggtggtggaagg
gaattgcatttcatagaagagaaagaaattgatctaaatgaaattttgtcagcacctcca
ccaaagattccgttagatgtatctctgcgagctcactggctgagtgtggatggggtgcag
ccaactgtacctgagaatccgcctccactctccaaagaatcccagaaactggagtcagtt
gaccccatcagcaagcttagcaagcctgccaacaaggatgcagcaggtaaaccaatctgc
gggaaggcggcgcggctgaaggcgtcggagtcggtgcacgtgaagcagctggccacgcac
gagctgagcgtggagcagcagctgtactacaaggagatcaccgaggcctgcgtcggcagc
gacgagggccggcgcgccgaagccttgcagtctctggcgtgcgacccggggctgcatgaa
atgttgccgcggatgtgcactttcatttctgaaggtgtcaaagtcaatgttgtacaaaac
aacttggcattgctgatctacttgatgcgaatggtcaaagcattgctggataatcagtcg
ctttatctggagaaatatttgcatgaactgattccgtcggtgtcaacctgcatagtttct
cggcaactatgcctgaggcctgaaatggataaccattgggcattgagggattttgctgca
cgccttatgtctcaaatatgcaagactttcaacacctctacgaataatttacagacaaga
gtaacgcggttattcgcaaaagctctacaatgtccctctcaaacagacaacgaacctggt
gctggaccatcaatggctaatatgaaggaatctgagaagactccgctcgcttctctctat
ggagctatacaagggttggcagaacttggcccagaagttgtgaaggtgttgatcctgccg
cgcgtgcggtggctgggcgagcgcgtggagggcgcgctgacgggcacgggcggcgccgac
cggctggcggccggcaacctcaagcaccagctgctcaaggtgctcgcgcccgtgctgcgc
cagctgcgccaggcgcccgaccagcccgacgactacaagcgtgagtacgggtacctgggc
ccgagcctgcagcagatggtgagcaagctgcgcgcgtcgccggcgggcagcgcggcgggc
ggcgccgtggccgtggtcacgtgcacgccgccgctgctgccgcccgcgccgcccgcgccg
cacgcgccgcacgcctccctcgcctccaagacagttgacaccttggggccccgaaacgtg
atgatgagcgccggagccgggccgcagtcgccgtcgccggccacgccgcctccgcagaag
ttcgtcatcgtgtcgcagccgaagccgccacagagtcagccggcgagtagcgcagggctc
gtggcggtgcacagctcgcagcccgcgcggaccccccacgtgcagtcggtggtggtgacg
agcgggccggcgggcgccgcgccgccgccgcagaagctgctggtggtggggctgccgccc
gcgcccgcctccgcgcctgccgccgccgccgccgcgccgccgcccgcacactcgcccgct
gttgcttcctctagccaggttagccaggcgccggtgtcggtggtggcaaagcctgtgttc
gcgcgcggcggcagcgcgccgcagccgccgcccgagctagacgacctgtcgcacctcgcc
tga
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