Leguminivora glycinivorella (soybean pod borer): 125240736
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Entry
125240736 CDS
T09956
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125240736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgly03021
]
125240736
03036 Chromosome and associated proteins [BR:
lgly03036
]
125240736
Transcription machinery [BR:
lgly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125240736
Coactivators
SAGA/TFTC/STAGA complex
125240736
Chromosome and associated proteins [BR:
lgly03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125240736
STAGA complex
125240736
TFTC complex
125240736
SAGA complex
125240736
SLIK complex
125240736
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
125240736
NCBI-ProteinID:
XP_048004738
LinkDB
All DBs
Position
Z:complement(18297048..18314032)
Genome browser
AA seq
660 aa
AA seq
DB search
MGDSDIVYGSTMSAESMKVIAESVGIATLSDDAAKDLSDDVSYRLKVIVQDAMKFMHHSK
RQKLSITDIDHALKAKNFEPQYGFVQPDSLPFRFASGGGRELHFIEEKEIDLNEILSAPP
PKIPLDVSLRAHWLSVDGVQPTVPENPPPLSKESQKLESVDPISKLSKPANKDAAGKPIC
GKAARLKASESVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRAEALQSLACDPGLHE
MLPRMCTFISEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELIPSVSTCIVS
RQLCLRPEMDNHWALRDFAARLMSQICKTFNTSTNNLQTRVTRLFAKALQCPSQTDNEPG
AGPSMANMKESEKTPLASLYGAIQGLAELGPEVVKVLILPRVRWLGERVEGALTGTGGAD
RLAAGNLKHQLLKVLAPVLRQLRQAPDQPDDYKREYGYLGPSLQQMVSKLRASPAGSAAG
GAVAVVTCTPPLLPPAPPAPHAPHASLASKTVDTLGPRNVMMSAGAGPQSPSPATPPPQK
FVIVSQPKPPQSQPASSAGLVAVHSSQPARTPHVQSVVVTSGPAGAAPPPQKLLVVGLPP
APASAPAAAAAAPPPAHSPAVASSSQVSQAPVSVVAKPVFARGGSAPQPPPELDDLSHLA
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgggagactccgacattgtttacgggtcgactatgtcggcagagtctatgaaggtgatt
gctgaaagtgtaggcatagcgaccctcagtgacgatgctgctaaagatctcagtgatgat
gtatcatatcgtctcaaagttatcgtacaggacgctatgaagtttatgcatcactccaaa
cgacaaaagctatcaatcacggatattgatcatgcactcaaggcaaaaaatttcgagccc
caatatggatttgttcagcctgattcattacccttcagatttgcatctggtggtggaagg
gaattgcatttcatagaagagaaagaaattgatctaaatgaaattttgtcagcacctcca
ccaaagattccgttagatgtatctctgcgagctcactggctgagtgtggatggggtgcag
ccaactgtacctgagaatccgcctccactctccaaagaatcccagaaactggagtcagtt
gaccccatcagcaagcttagcaagcctgccaacaaggatgcagcaggtaaaccaatctgc
gggaaggcggcgcggctgaaggcgtcggagtcggtgcacgtgaagcagctggccacgcac
gagctgagcgtggagcagcagctgtactacaaggagatcaccgaggcctgcgtcggcagc
gacgagggccggcgcgccgaagccttgcagtctctggcgtgcgacccggggctgcatgaa
atgttgccgcggatgtgcactttcatttctgaaggtgtcaaagtcaatgttgtacaaaac
aacttggcattgctgatctacttgatgcgaatggtcaaagcattgctggataatcagtcg
ctttatctggagaaatatttgcatgaactgattccgtcggtgtcaacctgcatagtttct
cggcaactatgcctgaggcctgaaatggataaccattgggcattgagggattttgctgca
cgccttatgtctcaaatatgcaagactttcaacacctctacgaataatttacagacaaga
gtaacgcggttattcgcaaaagctctacaatgtccctctcaaacagacaacgaacctggt
gctggaccatcaatggctaatatgaaggaatctgagaagactccgctcgcttctctctat
ggagctatacaagggttggcagaacttggcccagaagttgtgaaggtgttgatcctgccg
cgcgtgcggtggctgggcgagcgcgtggagggcgcgctgacgggcacgggcggcgccgac
cggctggcggccggcaacctcaagcaccagctgctcaaggtgctcgcgcccgtgctgcgc
cagctgcgccaggcgcccgaccagcccgacgactacaagcgtgagtacgggtacctgggc
ccgagcctgcagcagatggtgagcaagctgcgcgcgtcgccggcgggcagcgcggcgggc
ggcgccgtggccgtggtcacgtgcacgccgccgctgctgccgcccgcgccgcccgcgccg
cacgcgccgcacgcctccctcgcctccaagacagttgacaccttggggccccgaaacgtg
atgatgagcgccggagccgggccgcagtcgccgtcgccggccacgccgcctccgcagaag
ttcgtcatcgtgtcgcagccgaagccgccacagagtcagccggcgagtagcgcagggctc
gtggcggtgcacagctcgcagcccgcgcggaccccccacgtgcagtcggtggtggtgacg
agcgggccggcgggcgccgcgccgccgccgcagaagctgctggtggtggggctgccgccc
gcgcccgcctccgcgcctgccgccgccgccgccgcgccgccgcccgcacactcgcccgct
gttgcttcctctagccaggttagccaggcgccggtgtcggtggtggcaaagcctgtgttc
gcgcgcggcggcagcgcgccgcagccgccgcccgagctagacgacctgtcgcacctcgcc
tga
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