Leguminivora glycinivorella (soybean pod borer): 125241030
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Entry
125241030 CDS
T09956
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125241030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgly03021
]
125241030
Transcription machinery [BR:
lgly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
125241030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
125241030
NCBI-ProteinID:
XP_048005262
LinkDB
All DBs
Position
Z:25610561..25629487
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AA seq
520 aa
AA seq
DB search
MATWSGGGGRSCWWNRSAEPTCFASPAVQEFKIRVPKNVKKKHHVMRFNATLNVDFAKWT
QVKMERENNIKEFKGLDEDMPKFGAGSEYGRDIREEARRKKFGIISRKYKPEDQPWILKV
GGKTGKKFKGIREGGVSENAAYYVFTHAADSAIDAYPLQEWYNFQPIQRYKALSAEEAEQ
EFGRRNKVINYFSLMFRKRMRGDDAADDGEDPDDKKTKGAKAKKELKISDMDEWIDSDDD
SSGSEAAEKDNDSDSGAKKKPNKKGPVKKKKKVEDEAFEESDDGDEEGRERDYISDSSDS
ETDHEAKANKELKGVAEEDALRKLLTSDEDSEEEQEQKEASEPEDEPTREGEERASKLTK
KRRADDKHHSSSELSEDSDTDAEAPPKKPKKRKEPAAAPTPSSASAPGSASTSRSGSPAP
AAAAAAAAHAAAAAAAANAPPAKRPKIDPSYTECGVTEEAVRRYLARKPMTTTELLTKFK
SKLTGVSSERLLETMTQILKRINPVKQNINGKMYLSIKNN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtggagcggaggcggcggccgcagctgctggtggaaccgatcggcagaacca
acctgcttcgcgtcaccggccgtgcaagagttcaaaattcgggtccctaagaatgtgaaa
aagaaacatcatgtgatgcgttttaatgccacattgaatgtagattttgcaaaatggact
caagttaagatggagagggagaacaacattaaggaattcaaaggattagatgaagacatg
cccaaatttggtgctggctcagagtacgggcgagacattcgtgaagaagctcgccgcaag
aagttcgggatcatctcgcgaaagtacaagcctgaagatcaaccatggatattgaaagtg
ggagggaaaacaggaaaaaagttcaagggcatccgcgagggcggcgtgtcggagaacgcg
gcgtactacgtgttcacgcacgccgccgactccgccatcgacgcctaccccttgcaggag
tggtataactttcaaccaattcaaagatacaaagcgttgtctgcggaagaagccgaacag
gaattcggaagacgcaacaaagtgataaactacttttcgctgatgttccggaagcgcatg
cgcggcgacgacgcggccgatgacggcgaagaccccgacgacaagaagactaaaggagcc
aaggcgaagaaagagttaaagatatccgatatggacgaatggattgattccgacgacgac
tcctccggctccgaggctgcagaaaaagacaacgacagcgactcaggcgccaagaagaaa
ccaaataaaaaaggtccggtgaagaagaagaaaaaagtggaggacgaggcgttcgaggag
agcgacgacggcgacgaggagggccgcgagcgcgactacatctccgactcctccgacagt
gagacagaccacgaggcgaaggcgaacaaagagctcaaaggagtagcagaagaagacgca
ctcaggaagctgctgacatcggacgaggacagcgaggaggagcaggagcagaaggaggcg
tcggagccggaggacgagccgacgcgcgagggcgaggagcgcgccagcaagctcaccaag
aagaggcgcgccgacgacaagcaccactccagctccgagctcagcgaggactccgacacc
gacgccgaggcgccgcccaagaagcccaagaagcgcaaggagcccgccgccgcacccacg
cccagctcagcgagcgccccgggcagcgccagcacgtctcgctctgggtcgcccgcgccc
gcggccgccgccgccgccgccgcccacgccgccgccgccgctgccgcagccaacgcgccg
cccgccaagcggcccaagatcgatccctcctacaccgagtgtggcgtgacggaggaggcg
gtgcggcgctacctggcgcgcaagcccatgaccaccaccgagctgctcaccaagttcaag
tccaagctcaccggcgtcagctccgagcgcctgctcgagaccatgacgcagatcctcaag
cgcatcaaccccgtcaagcagaacatcaatgggaagatgtatttaagtatcaaaaacaac
taa
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