Leguminivora glycinivorella (soybean pod borer): 125241270
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Entry
125241270 CDS
T09956
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125241270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125241270
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
125241270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
PAM2
Motif
Other DBs
NCBI-GeneID:
125241270
NCBI-ProteinID:
XP_048005617
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All DBs
Position
Z:complement(46386311..46409602)
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AA seq
764 aa
AA seq
DB search
MNSVLNPEAPEFYPHLTSVTQGGYTKVNKSIRSSNQLPSGASYELFKTFTDFNIVACQLS
ENVVHQSNQIMITELPAVKLKRIDIEYNTDKVTDANDSMLDRVNINMDTLTGVNKPSEKF
AASVRPGAAVASWNHSPVIAKIQVGSTMLIGAKNIPRPQLSFKDTIDNSDNLWVPKISDK
PNSVKPLALNILYNDTGEAVGYAHPYKVELDIYHPPGCFIDPDPAPPAYPKPLAETTLTY
IDTEQQLDALVDHLTGVAEFAVDVEHHSYRSYQGITCLVQISTNEGGDFIIDTLAIREHI
HKLNLVFTDPKKLKVFHGAEMDVVWLQRDFGVYVVGLFDTHQAARALNCSSNSLKHLLWQ
YCQVDADKKYQLADWRIRPLPEELVEYARMDTHYLLYIWRQMKADLLRAAAGKPQLLLSV
IEQSRQICGTTFNKKVIHENSHMPLYLRSKKSFNSRQMSALKMLYKWRDAQARELDEGTI
YLLPNHMLLALAETLPREIQGVNACCSPMPPFVKQNLITIHRMLLSCRELPLEPQLYPMP
SSISSAINAHQPSAFNLHDFSHYPEYSEERINLDRAALLFSDLADLPGHPDIPAFVPSYN
TDTYCVVSDLNVDAKQFIPPYDRYRKYRSLAQMEEIREYRDKEAKIAAIGKGDELIKTEV
LNKLQQAKSHIENDENVVETKENLLDDSATKQRKRKISPDTVERKETNKVVDSKKELKQT
NIKHSKPEAKNEVKPYLYKNANYKKFFDNNARSHKQPKAKFKKH
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgttttaaatccagaggctccggagttttaccctcacttgacgtcagtaaca
cagggtggatacacaaaagtgaacaaatccatcagatcgtcaaaccagctaccatccggg
gcttcctacgagctgttcaaaacgttcacagacttcaacatagtagcatgccagttaagc
gaaaatgttgttcaccagtcaaatcagataatgatcaccgaattgcccgctgtgaagtta
aaacgaatcgacatcgaatacaacactgacaaagtgacagacgccaatgacagtatgctg
gacagagtgaacataaacatggacacgctgacgggagtgaacaagcccagcgagaagttc
gccgcgtcggtgcggcccggcgccgccgtcgcctcctggaaccactcgcccgtcatcgcc
aagatacaggtgggatcgacaatgctaataggcgccaagaacatcccccggccgcagctc
tcgttcaaggacacgatcgacaactctgacaacctgtgggtgcccaagatatcagacaaa
ccgaacagcgtcaagccgctcgcgctcaacatactgtataacgacacgggggaggcggta
gggtacgcgcacccatacaaagtggagctggatatataccacccgccaggctgcttcata
gaccccgaccccgcgccgcccgcgtacccgaagcccctcgcagagaccacactcacgtac
atcgacacagagcaacagctagacgcattagtcgaccacctgaccggcgtcgcggagttt
gcggtcgacgtggagcaccattcctacaggagttaccaagggataacgtgtctagtacaa
atctcaacgaacgaaggcggagacttcatcatagacacactagcgataagggaacacatt
cacaaactaaacctcgtcttcacggaccccaagaaactcaaagtgttccacggcgccgaa
atggacgttgtatggctgcaacgcgacttcggcgtgtacgtggtggggctcttcgacacg
caccaagcggcgcgggcgctcaactgctccagcaactcgctcaaacacctgctgtggcag
tactgccaggtcgacgcagacaagaaataccagctcgcggactggcgcatccgacctcta
ccggaagagctggtggaatacgcgcgtatggacacacactatctgctgtacatctggcga
cagatgaaggcggacctgctgcgtgccgccgccggcaagccacagctgctcctgtctgtc
atagagcagagccgacagatctgcggcacgacattcaacaagaaggtgatccacgagaac
agccacatgccgctctacctgcgctccaagaagtccttcaactcgcggcagatgtcagca
ctcaagatgctctacaagtggagagacgcccaggcgcgtgagctcgacgaaggcaccata
tacctgcttccaaatcacatgttgctggctctagccgagacgcttcctcgagagattcag
ggcgtgaacgcgtgctgttcgcccatgccgcccttcgtcaaacagaaccttatcaccata
cacagaatgctgctgtcgtgtcgggagctgccgctggagccgcagctgtacccgatgccg
tccagcatcagcagcgccatcaacgcgcaccagccctccgccttcaacctgcacgacttc
tcgcactaccccgaatacagcgaggagcgcatcaacctggaccgggcggcgctcctgttc
agcgacctggccgacttgccgggccaccccgacataccagccttcgtaccctcctataat
actgacacatactgtgttgtgtccgatttgaacgtcgacgcaaaacagttcataccgcct
tatgacagatacagaaaatatcgctcgttagctcagatggaagagatacgggagtacaga
gataaagaagcgaaaatagcggcgataggaaaaggggacgagttgattaaaacagaagtt
ctcaataagttacaacaggctaagtcacatatagaaaacgacgagaacgtcgttgaaact
aaagaaaatttacttgacgacagtgcgacgaaacagcgcaaaaggaaaatatcacccgac
accgtagaacgcaaagaaacgaacaaagtagtcgactcgaaaaaagagttgaaacaaact
aatattaagcacagcaagcccgaagcgaagaacgaagtcaaaccgtacctttacaaaaac
gcgaactacaaaaagttcttcgacaacaacgctaggtcgcacaaacaacctaaggcaaag
tttaagaagcattga
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