Leguminivora glycinivorella (soybean pod borer): 125241389
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Entry
125241389 CDS
T09956
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03030
DNA replication
lgly03410
Base excision repair
lgly03420
Nucleotide excision repair
lgly03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125241389
03410 Base excision repair
125241389
03420 Nucleotide excision repair
125241389
03430 Mismatch repair
125241389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgly03032
]
125241389
03400 DNA repair and recombination proteins [BR:
lgly03400
]
125241389
DNA replication proteins [BR:
lgly03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125241389
DNA repair and recombination proteins [BR:
lgly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125241389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
PTCB-BRCT
AAA_22
AAA_30
AAA_14
AAA_assoc_2
AAA_5
AAA_16
AAA_17
AAA_33
RuvB_N
BRCT_2
AAA_19
AAA_18
RCF1-5-like_lid
AAA_11
DUF1757
Motif
Other DBs
NCBI-GeneID:
125241389
NCBI-ProteinID:
XP_048005810
LinkDB
All DBs
Position
Z:complement(24644727..24668778)
Genome browser
AA seq
1064 aa
AA seq
DB search
MSKDIRSFFKPQKPKKAKTEEDVDVIPESPDVAIKIKKRENRKKRVLSDSDEEIFSTKKK
KSNEEPKHKTLPKKELKEVKAADIFGSDPIKRTEPSVQSVQKKTETGIHSDDDFDKSLLE
LDSTEDLDLNNVKKEPTSVKSKNSKSHKSPTKAETNSDINKKKTPEVNSINGNGNLSAED
HESETGSSKAKKRHLDLTSENTRESKQNKIGKSKQDVNKSKDSNSRNENTFTNDKDNFEA
TDSELDSSQVKSKRKLDQSLNESVLTDEERYERKRHSAALYQKYLNRSGPKHLGAKTIPE
GTPNCLKDCAFLLTGVLDSFERDEVAEAITKLGGTIKNSISKKVTHVLAGEDAGPAKLAK
AQDLGIKIINENEFLELIVTLSKGDKTEKTRIKDEIKKEKHSIPKSNKEKHHTENKKNQK
SDTSEKSVKVKTSSKDKDIKSEIVDVKVKIETKKDQTKSTDTESKSKLSVNTTESKIKVN
STKDSQDSSSTKPAMVQSAMWVEKYKPQSLKQIIGQHGEASNVKKLCNWLTKWYVNRKAK
LPKPSPWAKNDDGGYYKAALLSGPPGVGKTTTVTLVCKELGFDMVEFNASDTRNKTLIKE
QIGELLTTTSLSGYAKGMTGKQAVSKKHVLVMDEVDGMAGNEDRGGLQELISLIKAASVP
IICMCNDRNSQKMRSLVNYCYDLRFNRPRVDQIKAAMMSVCCKEGIKVPGEALSQLIVAA
NQDVRQTLNLLSMWAVDRDRADADRLARDASQTKKDIKLGPWEAIRKVFSAEEHKSMSIH
DKSDLFFYDYSLAPLFVQENYLQVAPHCPKHEVLERLSRAADSISVGDLVEARIRGSQAW
SLLPIQAMYSSVIPGHAMAGHVTGQIQFPGWLGKNSRKNKMHRLCQEIHAHTRLRTSGSK
SSIFLDYCTHLRDAIVTPLVRDKADGIAQSLEVLEAYHLLRDDLDSLTEMSLWPGQRNPM
ILIDSKVKAAMTRTYNKKAMALPYAPGAVRRARAADADADGAPADDDADADADADQQDDS
DPENDLLIKKKRPMKKPEVKKMKLVPVKTSLVRVKARERRSSSL
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggacattcgctcgtttttcaagcctcaaaaaccgaaaaaggctaaaacagag
gaggatgttgacgttataccagaatctcctgatgtagcaattaagattaagaaaagagaa
aacagaaagaaacgagtgttgagtgactcagatgaagaaatattttctacaaaaaagaaa
aagtcaaatgaagagcccaaacataagacactccctaaaaaagaactcaaagaagtcaaa
gcagcagatatctttggtagtgaccccattaaaagaacagagccaagtgttcaatcagtc
cagaagaaaactgaaactggtattcattctgatgatgattttgataaaagtctattggaa
cttgatagcactgaagacttagatctgaataatgttaaaaaggagcctacctcagttaaa
tctaagaatagtaagtcacacaaaagcccgactaaagcagaaaccaattcagatatcaat
aagaagaagacaccagaagtcaactctattaatggcaatggaaatttgtctgcagaagac
catgaatcagaaacaggttcatcaaaagcaaaaaagagacaccttgatttaacgtctgag
aacacacgtgaatcaaagcaaaataaaattgggaaatcaaagcaagatgttaataaatca
aaggatagtaatagtagaaatgagaatacatttacaaatgacaaagataattttgaagca
acagactctgaactagattcaagtcaagtaaagagcaagagaaaacttgatcagagccta
aatgagtctgttctgactgatgaagagagatatgaacgtaaacgacactctgcagcattg
taccaaaagtatttgaacaggtctggacctaaacatttgggagctaaaacgattcctgag
ggtacaccaaattgcttaaaagattgcgcctttttgctaactggtgtgttggactccttt
gaaagagatgaggtcgctgaagctataacgaaactgggtggaactatcaaaaactcaatc
agcaaaaaggttacacatgtattggctggagaggacgcaggcccggcgaaacttgcaaaa
gctcaagatctaggaattaaaataataaacgagaatgaatttctggaattgatagtgacc
ttatccaaaggagacaagactgagaaaactagaattaaagatgaaatcaagaaagaaaaa
cattctattcctaaatcaaataaggaaaaacatcatacagaaaataaaaagaatcagaaa
tctgacaccagtgagaaatctgtaaaagttaaaactagctctaaagataaagatatcaaa
agcgaaatcgttgatgtgaaagtaaaaattgaaacaaaaaaagatcaaaccaagtctact
gatacagaaagtaaatccaaattaagcgtaaatactactgaaagtaaaataaaagtgaat
tctactaaagattcacaggacagctcaagtactaaaccagccatggtgcagtctgcaatg
tgggttgaaaaatataagccacaatcactcaagcaaatcattggccaacacggggaagct
agcaacgttaaaaaattatgtaactggcttaccaaatggtacgtgaatagaaaagcgaaa
ttaccaaagcctagtccatgggcgaagaatgatgacggaggatactacaaagcagctctg
ctgtcgggacctccgggcgttggtaaaacaacgacggtgacgctggtgtgcaaagagctc
gggttcgacatggtggagttcaacgcgtccgacacccggaacaagacgctcataaaggag
cagatcggggagctgctgaccaccacttccctatccggatacgccaagggaatgacgggc
aagcaagctgtttcaaagaaacatgttttggtaatggacgaagttgacggcatggctggc
aacgaagacagaggtgggctccaagagttgataagccttataaaggcagcatccgtaccc
atcatatgcatgtgcaatgatagaaacagccagaaaatgcggtcgctcgtcaattattgc
tacgatttgagatttaacaggcctcgagttgatcaaataaaggcggcgatgatgtcagta
tgctgcaaggagggtatcaaagtgccgggcgaggcgctgtcgcagctgatcgtggccgcc
aaccaggacgtgcggcagacgctcaacctgctgtccatgtgggccgtggaccgagaccgc
gccgacgccgaccgcctcgcgagggacgcctcacagaccaagaaggatatcaaacttggg
ccctgggaagccatacgcaaggtgttctccgcggaagagcacaagagcatgagcatccac
gacaagagcgacctgttcttctacgactacagcctcgcgccgctcttcgtgcaggagaac
tatctgcaggtcgcgccgcactgccccaagcatgaggtcctggagcggctgagcagggcg
gcggacagcatcagcgtcggcgacctcgtggaggcgaggatccgcggcagccaagcctgg
agccttctgcctatccaggcgatgtacagctcagtgatccccggacacgcgatggcgggc
cacgtgaccgggcagatccagttcccgggctggctcggcaagaactcgcgcaagaacaag
atgcaccgcctctgccaggagatccacgcgcacaccaggctcaggacatccggttccaaa
tcatcaatattcctggactactgcacgcacctgcgcgacgcgatcgtgacgccgctcgtg
cgagacaaggccgacggcatcgcgcagtcgctggaggtgctcgaggcctaccacctgttg
agggacgacttggactccttgacggaaatgtcgctgtggccgggccagaggaacccgatg
attcttattgattcaaaggtgaaagcagccatgactcgcacatacaacaagaaagcgatg
gcgctgccgtacgcgccgggcgcggtgaggcgcgcgcgcgccgccgacgctgacgccgac
ggcgcgcccgctgacgacgacgctgacgccgacgccgacgccgaccagcaagatgacagc
gaccccgagaatgacctcctcattaagaaaaaaagaccaatgaaaaaaccggaggtaaaa
aagatgaagctagtaccagtaaagacaagcctagttcgagtaaaggcaagggaaagaaga
agtagttctctatag
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