Leguminivora glycinivorella (soybean pod borer): 125242226
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Entry
125242226 CDS
T09956
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03018
RNA degradation
lgly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125242226
09123 Folding, sorting and degradation
03018 RNA degradation
125242226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125242226
03041 Spliceosome [BR:
lgly03041
]
125242226
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125242226
mRNA degradation factors
5'-3' decay
Lsm complex
125242226
Spliceosome [BR:
lgly03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125242226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Gemin6
Motif
Other DBs
NCBI-GeneID:
125242226
NCBI-ProteinID:
XP_048006917
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All DBs
Position
2:14575703..14576120
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AA seq
96 aa
AA seq
DB search
MASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSSTGVAQVVLGLH
IIRGDNVAIVGQIDESIDSRLDLGNIKAEPLGVIAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggcctcgaaaactacgtaaaccaaacagtgtctgttattacatccgatgga
cgtaatttcatcggcacgctgaaggggtttgaccaaacaataaacattatattagacgag
tcgcatgaaagagtattttcttcgtctactggagtggcgcaggtggtgctgggactgcat
atcatcagaggtgacaatgtcgcaatcgtgggacagatagacgaatctattgatagcaga
ttggaccttggaaatattaaagctgagcctttaggtgtgatagcgcattaa
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