Latilactobacillus graminis: LG542_02280
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Entry
LG542_02280 CDS
T06857
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lgm
Latilactobacillus graminis
Pathway
lgm03420
Nucleotide excision repair
lgm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LG542_02280 (pcrA)
03430 Mismatch repair
LG542_02280 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgm03400
]
LG542_02280 (pcrA)
Enzymes [BR:
lgm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LG542_02280 (pcrA)
DNA repair and recombination proteins [BR:
lgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LG542_02280 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LG542_02280 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
AAA_11
ResIII
DUF6024
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QFP79126
LinkDB
All DBs
Position
459995..462244
Genome browser
AA seq
749 aa
AA seq
DB search
MSEKELLQGMNDKQAEAVLTTEGPLLIMAGAGSGKTRVLTHRVAYLIEEKHVLPWRVLAI
TFTNKAAREMRERVGNLLGEGAQDVWVSTFHALCVRILRREIEQIGYNRAFTIADPAEQL
TLMRHVCRDLNIDTKKFDPKAILGMISNAKNELQTPNDYAGLANGPFEKIVAQCYTEYQK
RLQQNQALDFDDLIMQTIRLFKENQVTLEHYQEKFQYIHVDEYQDTNEAQYTLVNMLAAK
YKNLCVVGDADQSIYGWRGANMDNIMNFEHDYPNAKSVMLEQNYRSTKTILEAANGVINN
NQYRKPKELWTENNEGQPITYYRGQSERDEALFVITKIQEEMQKNQRKFGDFAVLYRTNA
QSRSIEEAFVKANMPYKMVGGHKFYDRKEIKDILAYLRLVVNASDSMSFERVVNSPKRGI
GPGTLEKLTQFADDHQWSLLEAAQNAELSMIPSKSRKTLIDFGNVIGDLAKMREFLNVTD
LTEQLLDKTGYKAALEAENTLEAQSRLENIEELLSVTKQFDEHYEPEEDDSDLFVDFLAE
LSLVSDLDSVEEEASEVTMMTLHAAKGLEFPVVFLMGMEEGIFPLSRALLEEDELEEERR
LAYVGITRAESKLYLTNAYSRMLYGRQQSNQASRFVGEIDDGLLDYANGDAGSIPEHKLP
FGKSNRHARATATTYSANKTTTSHKIADTTGGENRGAWTAGQKVQHKKWGIGTVVKVNGT
GNDQELDIAFKEQGVKRLLASFAPIEKVE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgaaaaagaattgttacaagggatgaatgataagcaagcagaagcggtgctcaca
acggagggcccacttttaattatggcgggtgccggtagcgggaagacccgggtgttaaca
catcgggtcgcttatttaattgaagaaaagcatgtactcccgtggcgcgtgcttgcgatt
acgtttaccaataaagcggcccgcgaaatgcgtgaacgtgttggtaatttacttggcgaa
ggagcgcaagatgtttgggtatccacctttcatgccctttgtgtgcggattttgcgccgt
gaaattgagcaaatcggttataaccgggcgtttacgattgccgatccggctgaacaattg
acgttgatgcgccatgtttgtcgtgatttaaacattgatacgaaaaaatttgatcctaaa
gcaattttagggatgattagtaatgctaaaaatgaactacagacgccaaatgactatgct
ggtctcgcaaatggaccatttgaaaagattgtcgcacaatgttataccgaatatcaaaaa
cggctccaacaaaaccaagcacttgattttgatgatttaattatgcagacaatccgttta
tttaaagaaaaccaagtgacacttgaacattatcaagaaaagtttcaatacattcacgtt
gatgaatatcaagataccaatgaagcccaatatacattggttaatatgttagccgcgaaa
tacaagaatctttgtgttgtcggggatgctgatcagagtatttatggttggcgcggggct
aacatggacaatatcatgaatttcgaacatgattatcccaatgctaaatccgttatgttg
gaacaaaattaccgttcaaccaagacgattctagaagccgcaaatggggtgattaacaat
aatcaataccgcaagcccaaggaattgtggactgaaaataatgaaggacaaccgattact
tactatcgtggtcaaagtgaacgcgacgaagccctatttgtcatcacgaagattcaagaa
gaaatgcaaaagaaccaacgtaaattcggagacttcgccgttttataccggacgaatgct
caatcacggtcaattgaagaagcgtttgtcaaagccaacatgccatataagatggtcgga
ggacacaagttctacgatcgtaaggaaatcaaggatattttggcttacctacgattggtc
gttaatgcgtccgattcaatgagctttgagcgggtggttaacagtcctaaacggggaatt
ggcccagggacgcttgaaaaattaacccagtttgccgatgatcatcaatggtcattactc
gaagcagcgcaaaatgcggaactatcaatgattcctagtaagagtcgtaagacgctgatt
gatttcgggaacgtaattggtgacttagcgaagatgcgcgaatttttaaatgtgaccgat
ttaacagagcaattattggataaaactggttacaaagctgcgctcgaagctgaaaatacg
ctcgaagcacaaagtcgtttagaaaacattgaagaattactttcagtaacgaaacaattt
gatgaacactacgagccagaagaagatgatagtgatttatttgtcgatttcttagccgaa
ttatcactggtatctgatttagactcagttgaagaagaagctagtgaagtgacaatgatg
actttgcatgctgccaaaggactcgaatttccagtcgttttcttaatgggaatggaagaa
ggcatttttccattatcccgggccttacttgaagaagatgaattagaagaagaacgccgc
ttagcttacgtggggattacccgagcagaaagcaagttatacctaacgaatgcttattca
cggatgttatatgggcgccaacaaagtaatcaagcctcgcgctttgtcggtgaaattgat
gatggactattggattacgccaatggtgatgcggggagtattccagaacataaattacca
tttggcaagagcaatcggcatgcgcgtgccactgcaactacgtatagtgccaataaaact
acgacaagtcataaaattgccgatacaactggtggggaaaatcgcggggcttggacggct
ggtcagaaggtccaacacaagaaatgggggattggaacggtcgtcaaggtcaatgggact
ggcaatgaccaagaactagacattgcctttaaggaacaaggcgttaaacgattattagct
agtttcgcaccaattgagaaagttgaatag
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