Latilactobacillus graminis: LG542_03625
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Entry
LG542_03625 CDS
T06857
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lgm
Latilactobacillus graminis
Pathway
lgm03030
DNA replication
lgm03430
Mismatch repair
lgm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LG542_03625
03430 Mismatch repair
LG542_03625
03440 Homologous recombination
LG542_03625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgm03032
]
LG542_03625
03400 DNA repair and recombination proteins [BR:
lgm03400
]
LG542_03625
Enzymes [BR:
lgm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LG542_03625
DNA replication proteins [BR:
lgm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LG542_03625
DNA repair and recombination proteins [BR:
lgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LG542_03625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_a_NII
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
DEDDh_C
HHH_3
RNase_H_2
Auto_anti-p27
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QFP79370
LinkDB
All DBs
Position
723107..727447
Genome browser
AA seq
1446 aa
AA seq
DB search
MALDQTALFQKLLEQIALPADVANYPGFKNGQVEQVVVHETSKRWTFKLHFEAILPFAVY
VTFEQYLEAAFKAIADVAIEITTDATELDGGVLAAYWEYVINHSGIQSSMLHELCEKETP
YLDGRKVFLVVENDIVKTFFLNQAQTTIQEGYQRLGFPKFAIQPLIDESAAQRAIDDFQV
KKAEQDVARAQAAAEAIKKNETLKEKRQATGRPVNGPITMGRRLNPAEPTRQMITINEEE
RSVVIEGFVFDKEVRVLRSGRQLLILKMTDYSSSFTVKKFSRDNGDESIFAAIEQGMWFK
VRGSVQEDNFMRDLVVNANDLVEVSHPKRQDTAENGKRVELHLHTNMSQMDATNKIGDFV
KQAADWGQSAIAVTDHYDLQAFPDAYAAGKKNGVKILYGVEVNLVNDGTPVAYNLRDEAL
DHAEYVIFDVETTGLSAVYDSIIELAAVKMKDGEVIGSFDEFIDPGHPLSAFTTQLTSIT
NEMVHGAKKEAEVLALFKEFAGDAVLAGHNVTFDMGFINAGYGRNDLGQIENPVIDTLEV
SRMLHPEYKNHKLDTLTKRYKINLEHHHRANADAESTGYLLYKLEAEAAEMYGMVNVNQL
NERVGIGDAYKQARPAHAILMAQTQAGLKNLFKLVSASMTEYYYRTPRLPKSRLDALREG
ILVGSACASGEVFEAMMQKGYQEARDRAKYYDYLEVMPKAVYAPLLERELVRDNQALEEI
IRNMVKLGAELDKPVVATGDTHYLNPEDSIYRKILIHSMGGANPLNRSQLPDVHFRSTDE
MLAAFDFLGADVAQELVVTNPNQIADMIDEITPVKDKLYTPKMAGAEDEIQTLTMNRAHE
LYGDELPKIVQARLDKELKSIIGNGFSVIYLISQKLVYKSGKDGYLVGSRGSVGSSLVAT
MTGITEVNPLPPHYRCPNCHYSEFYTKGEVGSGYDLADKDCPECGTPLDKDGHDIPFETF
LGFHGDKVPDIDLNFSGDYQPVAHNYTKVLFGENNVFRAGTIGTVADKTAYGYVKAYERD
TEQTFRGAEVDRLAKGSTGVKRTTGQHPAGIIVVPDYMDIYDFTPIQFPADDQDAAWKTT
HFDFHSIHDNILKLDILGHDDPTMIRMLQDLSGIDPKTIPTDDPGVMALFSGTDSLGVTP
EQINSKLGTLGVPEFGTRFVRGMLEETHPTTFSELLQISGLSHGTDVWLGNAEELINKGV
VTLKDVIGCRDNIMMDLIHWGMDDSMSFNIMERVRKGKGIPDDWQQAMRDNENVPDWYID
SCLKIKYMFPKAHATAYILMALRIAYFKVYFPIIYYCAYFSVRAEDFDLVAMSQGKAGVK
ARMKEITDKGMEASTKEKNLLTVLEIANECLERGINIKMVDIEKSDSSDFLIQDDHTLLA
PFRAVPSLGGNVAKQIVSAREEKPFLSKEDLANRGKVSKTLIEYLTENNVLNDLPDENQL
SLFDMM
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
gtggcattagatcaaactgcattgtttcaaaaattattagaacaaattgcattaccagca
gatgtcgcgaactatcccggcttcaaaaacggccaagtagaacaagtcgtggtgcatgaa
acatcgaaacggtggacctttaaattacattttgaggccattttaccgttcgctgtttat
gtgacgttcgaacagtacttagaggcggcatttaaagcaattgccgatgtcgcgatagaa
attacgactgatgcgacagaattagatggtggcgtcttagcagcttattgggaatacgtt
attaatcatagtgggattcaatcgtccatgttgcatgaattatgcgaaaaagaaacccct
tatctcgatggacgcaaagtatttttagttgttgaaaacgatattgtaaaaaccttcttt
ttaaaccaagcccaaactaccattcaagagggatatcaacgattaggctttccgaagttt
gcgattcagccattgattgatgaatcggctgcgcaaagagcaatcgacgatttccaggtg
aaaaaggccgaacaagatgtcgcccgggcacaagcggctgcagaagccatcaagaaaaat
gaaacgcttaaagaaaaacggcaggcaacaggtcgaccagtcaatggcccgattacaatg
ggccgtcgtttaaatccagccgaaccaacgcgccaaatgattacgatcaatgaagaagaa
cgctcggttgtaattgaagggttcgtctttgataaagaagtccgcgtattgcgttctggc
cggcaattattaatcttgaagatgacggattactcatcttcattcacggtcaagaaattc
tcacgggataacggtgacgaaagtatctttgcagccatcgagcaaggcatgtggttcaag
gtgcgtgggagtgtgcaagaagacaacttcatgcgcgatctggtagtgaatgccaatgat
ttggtggaagtcagtcatcccaaacggcaagacactgctgaaaacggcaaacgcgtggaa
ttgcatttgcatacgaatatgtcgcaaatggatgcgaccaataagattggcgactttgtc
aaacaagccgctgattgggggcaatcggcgattgcggtgaccgatcactatgatttacaa
gccttcccagatgcctatgcggctgggaagaaaaacggcgttaaaattttatacggtgtc
gaagtcaatttagtgaatgatggcacgccagtcgcatataatttgcgtgatgaagcactc
gaccatgctgaatatgtcatttttgatgtggaaacaaccgggttatcggctgtttacgat
tcgattattgaattggctgctgtcaaaatgaaagatggcgaagtgattggttcgttcgat
gaattcatcgatcccggtcacccgctatcagcgttcaccacgcagttgacgagtatcacc
aatgaaatggtgcacggcgctaagaaagaagccgaagtcctagcattgttcaaagaattc
gctggcgacgctgtcttagctgggcataatgtgacgtttgatatgggctttatcaacgct
ggctatgggcgcaacgaccttggtcaaattgaaaatcccgtcatcgatacgttggaagtc
tcccggatgcttcatccagaatacaaaaatcataaactcgatacgttaactaagcggtat
aaaattaacttggaacaccatcaccgtgctaacgccgatgctgaatcaaccggttatttg
ttatacaaattagaagccgaagcggccgaaatgtatggcatggtcaatgtcaaccaactc
aatgagcgtgttggcattggcgatgcgtataaacaagcacggcctgcgcatgcgatattg
atggcgcaaactcaggcgggcttaaagaacttgtttaaattggtttcagcctcgatgact
gaatattattaccgcacaccgcgcttgccaaagagtcgcttggatgccttacgtgaaggg
attcttgtcggctcggcttgtgctagcggcgaagtcttcgaagcaatgatgcaaaaaggg
taccaagaagcccgcgatcgcgcgaagtactacgattaccttgaagtaatgcccaaagcc
gtttacgcgccattattggaacgggaactggtccgtgacaatcaagcgctcgaagaaatc
atccgcaacatggttaaactcggtgctgaattggataaaccagtcgttgcaacgggggat
acccattatttgaaccccgaagattcaatctatcgtaaaattttaatccactcgatgggg
ggcgccaatccactgaaccggtcacaattgccggatgtccatttccgctcaactgatgaa
atgctagcggcgtttgattttctgggggctgatgttgcccaagagctggttgtcaccaat
ccgaaccaaatcgccgatatgattgatgaaatcacaccggtcaaagataagttgtacacg
ccgaagatggcgggtgccgaagatgaaattcaaaccttaacgatgaatcgtgcgcacgaa
ttatatggggatgaactccccaaaatcgtgcaagcccgtctcgataaggaattgaagagt
atcattgggaacgggttctccgttatctacttgatttcgcaaaagctcgtgtataagagt
ggtaaggatgggtacttagttggttcccgggggtccgttggatcgagtttagtcgcgacg
atgaccgggattactgaagtgaatccattgccgccgcattatcgctgtcccaactgtcat
tactctgaattttataccaaaggggaagtcggttcaggctacgatttagccgataaggat
tgtccagaatgtgggacaccccttgataaagatggtcacgatattccatttgaaaccttc
cttggcttccacggggataaagtgcccgatattgatttgaacttctctggtgattatcaa
ccggttgcgcataactatacgaaggtcttgttcggcgaaaataacgtgttccgcgctggg
acgatcgggaccgtggctgataaaacggcctacggctatgtcaaagcctatgaacgtgat
acagagcaaacgttccgcggtgcagaagtcgatcgcctggccaaaggttcgactggtgtt
aaacgaacgactgggcaacatccggccgggatcattgttgtgccggattacatggacatc
tatgatttcacgccaattcaattcccagctgacgatcaagatgcggcctggaagacaacc
cattttgacttccattcgatccatgataatatcttaaaactcgatatcctgggccatgat
gatccgacgatgatccgaatgctccaagatttatcgggaattgatcccaagacgattcca
accgatgatcctggtgtgatggccttgttctccggcactgattcactcggcgtgacgcct
gaacagattaattcgaaattagggacgcttggcgtaccggaatttgggacgcggtttgtc
cgtggaatgctcgaagaaacgcaccccacgacgttctcagaactactacaaatttcgggt
ctgtcacatgggaccgatgtgtggttgggcaacgctgaagaactaattaacaaaggtgtt
gttaccctcaaagatgttatcggttgtcgtgataacatcatgatggatttaattcactgg
ggcatggatgatagtatgtcgtttaatatcatggaacgcgttcgtaaaggcaaagggatt
cctgatgattggcaacaagccatgcgcgataacgaaaatgtacccgactggtacattgat
tcctgtctgaaaattaagtacatgttcccgaaggcccatgcgactgcctatattttgatg
gcgttgcggattgcttacttcaaagtgtactttccaattatctattattgtgcctacttc
agtgtacgggccgaagatttcgacctcgtggccatgtcacaagggaaagcaggcgtcaaa
gcccgcatgaaggaaatcactgataaagggatggaagccagcaccaaggaaaagaacctc
ttgacggtcctcgaaatcgccaacgaatgtttggaacgcgggattaacattaagatggtc
gacatcgaaaaatcagattcatctgacttcttgatccaagacgaccataccttgcttgcg
ccgttccgcgccgtcccaagtctgggtggtaacgtagccaaacaaatcgtctctgcccgc
gaagaaaaacctttcttatccaaagaagatttagccaaccgcgggaaagtttccaagaca
ttgattgaatatttaacagaaaataacgtcttaaatgatttaccagatgaaaatcagtta
tcgttgtttgatatgatgtaa
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integrated database retrieval system