KEGG   Latilactobacillus graminis: LG542_03625
Entry
LG542_03625       CDS       T06857                                 
Name
(GenBank) PolC-type DNA polymerase III
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
lgm  Latilactobacillus graminis
Pathway
lgm03030  DNA replication
lgm03430  Mismatch repair
lgm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lgm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LG542_03625
   03430 Mismatch repair
    LG542_03625
   03440 Homologous recombination
    LG542_03625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lgm03032]
    LG542_03625
   03400 DNA repair and recombination proteins [BR:lgm03400]
    LG542_03625
Enzymes [BR:lgm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LG542_03625
DNA replication proteins [BR:lgm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LG542_03625
DNA repair and recombination proteins [BR:lgm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LG542_03625
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_a_NII DNA_pol3_finger DNA_pol3_a_NI HHH_6 tRNA_anti-codon DEDDh_C HHH_3 RNase_H_2 Auto_anti-p27 Zn_ribbon_8
Other DBs
NCBI-ProteinID: QFP79370
LinkDB
Position
723107..727447
AA seq 1446 aa
MALDQTALFQKLLEQIALPADVANYPGFKNGQVEQVVVHETSKRWTFKLHFEAILPFAVY
VTFEQYLEAAFKAIADVAIEITTDATELDGGVLAAYWEYVINHSGIQSSMLHELCEKETP
YLDGRKVFLVVENDIVKTFFLNQAQTTIQEGYQRLGFPKFAIQPLIDESAAQRAIDDFQV
KKAEQDVARAQAAAEAIKKNETLKEKRQATGRPVNGPITMGRRLNPAEPTRQMITINEEE
RSVVIEGFVFDKEVRVLRSGRQLLILKMTDYSSSFTVKKFSRDNGDESIFAAIEQGMWFK
VRGSVQEDNFMRDLVVNANDLVEVSHPKRQDTAENGKRVELHLHTNMSQMDATNKIGDFV
KQAADWGQSAIAVTDHYDLQAFPDAYAAGKKNGVKILYGVEVNLVNDGTPVAYNLRDEAL
DHAEYVIFDVETTGLSAVYDSIIELAAVKMKDGEVIGSFDEFIDPGHPLSAFTTQLTSIT
NEMVHGAKKEAEVLALFKEFAGDAVLAGHNVTFDMGFINAGYGRNDLGQIENPVIDTLEV
SRMLHPEYKNHKLDTLTKRYKINLEHHHRANADAESTGYLLYKLEAEAAEMYGMVNVNQL
NERVGIGDAYKQARPAHAILMAQTQAGLKNLFKLVSASMTEYYYRTPRLPKSRLDALREG
ILVGSACASGEVFEAMMQKGYQEARDRAKYYDYLEVMPKAVYAPLLERELVRDNQALEEI
IRNMVKLGAELDKPVVATGDTHYLNPEDSIYRKILIHSMGGANPLNRSQLPDVHFRSTDE
MLAAFDFLGADVAQELVVTNPNQIADMIDEITPVKDKLYTPKMAGAEDEIQTLTMNRAHE
LYGDELPKIVQARLDKELKSIIGNGFSVIYLISQKLVYKSGKDGYLVGSRGSVGSSLVAT
MTGITEVNPLPPHYRCPNCHYSEFYTKGEVGSGYDLADKDCPECGTPLDKDGHDIPFETF
LGFHGDKVPDIDLNFSGDYQPVAHNYTKVLFGENNVFRAGTIGTVADKTAYGYVKAYERD
TEQTFRGAEVDRLAKGSTGVKRTTGQHPAGIIVVPDYMDIYDFTPIQFPADDQDAAWKTT
HFDFHSIHDNILKLDILGHDDPTMIRMLQDLSGIDPKTIPTDDPGVMALFSGTDSLGVTP
EQINSKLGTLGVPEFGTRFVRGMLEETHPTTFSELLQISGLSHGTDVWLGNAEELINKGV
VTLKDVIGCRDNIMMDLIHWGMDDSMSFNIMERVRKGKGIPDDWQQAMRDNENVPDWYID
SCLKIKYMFPKAHATAYILMALRIAYFKVYFPIIYYCAYFSVRAEDFDLVAMSQGKAGVK
ARMKEITDKGMEASTKEKNLLTVLEIANECLERGINIKMVDIEKSDSSDFLIQDDHTLLA
PFRAVPSLGGNVAKQIVSAREEKPFLSKEDLANRGKVSKTLIEYLTENNVLNDLPDENQL
SLFDMM
NT seq 4341 nt   +upstreamnt  +downstreamnt
gtggcattagatcaaactgcattgtttcaaaaattattagaacaaattgcattaccagca
gatgtcgcgaactatcccggcttcaaaaacggccaagtagaacaagtcgtggtgcatgaa
acatcgaaacggtggacctttaaattacattttgaggccattttaccgttcgctgtttat
gtgacgttcgaacagtacttagaggcggcatttaaagcaattgccgatgtcgcgatagaa
attacgactgatgcgacagaattagatggtggcgtcttagcagcttattgggaatacgtt
attaatcatagtgggattcaatcgtccatgttgcatgaattatgcgaaaaagaaacccct
tatctcgatggacgcaaagtatttttagttgttgaaaacgatattgtaaaaaccttcttt
ttaaaccaagcccaaactaccattcaagagggatatcaacgattaggctttccgaagttt
gcgattcagccattgattgatgaatcggctgcgcaaagagcaatcgacgatttccaggtg
aaaaaggccgaacaagatgtcgcccgggcacaagcggctgcagaagccatcaagaaaaat
gaaacgcttaaagaaaaacggcaggcaacaggtcgaccagtcaatggcccgattacaatg
ggccgtcgtttaaatccagccgaaccaacgcgccaaatgattacgatcaatgaagaagaa
cgctcggttgtaattgaagggttcgtctttgataaagaagtccgcgtattgcgttctggc
cggcaattattaatcttgaagatgacggattactcatcttcattcacggtcaagaaattc
tcacgggataacggtgacgaaagtatctttgcagccatcgagcaaggcatgtggttcaag
gtgcgtgggagtgtgcaagaagacaacttcatgcgcgatctggtagtgaatgccaatgat
ttggtggaagtcagtcatcccaaacggcaagacactgctgaaaacggcaaacgcgtggaa
ttgcatttgcatacgaatatgtcgcaaatggatgcgaccaataagattggcgactttgtc
aaacaagccgctgattgggggcaatcggcgattgcggtgaccgatcactatgatttacaa
gccttcccagatgcctatgcggctgggaagaaaaacggcgttaaaattttatacggtgtc
gaagtcaatttagtgaatgatggcacgccagtcgcatataatttgcgtgatgaagcactc
gaccatgctgaatatgtcatttttgatgtggaaacaaccgggttatcggctgtttacgat
tcgattattgaattggctgctgtcaaaatgaaagatggcgaagtgattggttcgttcgat
gaattcatcgatcccggtcacccgctatcagcgttcaccacgcagttgacgagtatcacc
aatgaaatggtgcacggcgctaagaaagaagccgaagtcctagcattgttcaaagaattc
gctggcgacgctgtcttagctgggcataatgtgacgtttgatatgggctttatcaacgct
ggctatgggcgcaacgaccttggtcaaattgaaaatcccgtcatcgatacgttggaagtc
tcccggatgcttcatccagaatacaaaaatcataaactcgatacgttaactaagcggtat
aaaattaacttggaacaccatcaccgtgctaacgccgatgctgaatcaaccggttatttg
ttatacaaattagaagccgaagcggccgaaatgtatggcatggtcaatgtcaaccaactc
aatgagcgtgttggcattggcgatgcgtataaacaagcacggcctgcgcatgcgatattg
atggcgcaaactcaggcgggcttaaagaacttgtttaaattggtttcagcctcgatgact
gaatattattaccgcacaccgcgcttgccaaagagtcgcttggatgccttacgtgaaggg
attcttgtcggctcggcttgtgctagcggcgaagtcttcgaagcaatgatgcaaaaaggg
taccaagaagcccgcgatcgcgcgaagtactacgattaccttgaagtaatgcccaaagcc
gtttacgcgccattattggaacgggaactggtccgtgacaatcaagcgctcgaagaaatc
atccgcaacatggttaaactcggtgctgaattggataaaccagtcgttgcaacgggggat
acccattatttgaaccccgaagattcaatctatcgtaaaattttaatccactcgatgggg
ggcgccaatccactgaaccggtcacaattgccggatgtccatttccgctcaactgatgaa
atgctagcggcgtttgattttctgggggctgatgttgcccaagagctggttgtcaccaat
ccgaaccaaatcgccgatatgattgatgaaatcacaccggtcaaagataagttgtacacg
ccgaagatggcgggtgccgaagatgaaattcaaaccttaacgatgaatcgtgcgcacgaa
ttatatggggatgaactccccaaaatcgtgcaagcccgtctcgataaggaattgaagagt
atcattgggaacgggttctccgttatctacttgatttcgcaaaagctcgtgtataagagt
ggtaaggatgggtacttagttggttcccgggggtccgttggatcgagtttagtcgcgacg
atgaccgggattactgaagtgaatccattgccgccgcattatcgctgtcccaactgtcat
tactctgaattttataccaaaggggaagtcggttcaggctacgatttagccgataaggat
tgtccagaatgtgggacaccccttgataaagatggtcacgatattccatttgaaaccttc
cttggcttccacggggataaagtgcccgatattgatttgaacttctctggtgattatcaa
ccggttgcgcataactatacgaaggtcttgttcggcgaaaataacgtgttccgcgctggg
acgatcgggaccgtggctgataaaacggcctacggctatgtcaaagcctatgaacgtgat
acagagcaaacgttccgcggtgcagaagtcgatcgcctggccaaaggttcgactggtgtt
aaacgaacgactgggcaacatccggccgggatcattgttgtgccggattacatggacatc
tatgatttcacgccaattcaattcccagctgacgatcaagatgcggcctggaagacaacc
cattttgacttccattcgatccatgataatatcttaaaactcgatatcctgggccatgat
gatccgacgatgatccgaatgctccaagatttatcgggaattgatcccaagacgattcca
accgatgatcctggtgtgatggccttgttctccggcactgattcactcggcgtgacgcct
gaacagattaattcgaaattagggacgcttggcgtaccggaatttgggacgcggtttgtc
cgtggaatgctcgaagaaacgcaccccacgacgttctcagaactactacaaatttcgggt
ctgtcacatgggaccgatgtgtggttgggcaacgctgaagaactaattaacaaaggtgtt
gttaccctcaaagatgttatcggttgtcgtgataacatcatgatggatttaattcactgg
ggcatggatgatagtatgtcgtttaatatcatggaacgcgttcgtaaaggcaaagggatt
cctgatgattggcaacaagccatgcgcgataacgaaaatgtacccgactggtacattgat
tcctgtctgaaaattaagtacatgttcccgaaggcccatgcgactgcctatattttgatg
gcgttgcggattgcttacttcaaagtgtactttccaattatctattattgtgcctacttc
agtgtacgggccgaagatttcgacctcgtggccatgtcacaagggaaagcaggcgtcaaa
gcccgcatgaaggaaatcactgataaagggatggaagccagcaccaaggaaaagaacctc
ttgacggtcctcgaaatcgccaacgaatgtttggaacgcgggattaacattaagatggtc
gacatcgaaaaatcagattcatctgacttcttgatccaagacgaccataccttgcttgcg
ccgttccgcgccgtcccaagtctgggtggtaacgtagccaaacaaatcgtctctgcccgc
gaagaaaaacctttcttatccaaagaagatttagccaaccgcgggaaagtttccaagaca
ttgattgaatatttaacagaaaataacgtcttaaatgatttaccagatgaaaatcagtta
tcgttgtttgatatgatgtaa

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