Latilactobacillus graminis: LG542_05325
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Entry
LG542_05325 CDS
T06857
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lgm
Latilactobacillus graminis
Pathway
lgm03030
DNA replication
lgm03430
Mismatch repair
lgm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LG542_05325 (dnaE)
03430 Mismatch repair
LG542_05325 (dnaE)
03440 Homologous recombination
LG542_05325 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgm03032
]
LG542_05325 (dnaE)
03400 DNA repair and recombination proteins [BR:
lgm03400
]
LG542_05325 (dnaE)
Enzymes [BR:
lgm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LG542_05325 (dnaE)
DNA replication proteins [BR:
lgm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LG542_05325 (dnaE)
DNA repair and recombination proteins [BR:
lgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LG542_05325 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QFP79693
LinkDB
All DBs
Position
complement(1075902..1079237)
Genome browser
AA seq
1111 aa
AA seq
DB search
MPFVQLQVKSTYTLLESTTKIDALIKSAKARGYQSIALTDKNVTYGLVDFYKAAKAAELH
PILGLTLEIGGLLQTDERFPLIVLAKDLVGYQNLLKLSSKVMTQTDLVSFADITQWFSHL
VVITPAQAGELVRLLLQAEEQTTAYLTQLQAAVDPGSLYLGISAKQAAAPQRSGLIALSQ
TTGVPLVALGDVRYLEPDDAFSVQVLQHIKAGTQVNLHSGDQTTPGGYYLQAADQITAEF
EALQLVEAVHNTDKIAQLCQVELTFKRAQLPRFETPHQESATAYLEQLSQQGLQARFANQ
AIPQQYQERLQYELRVISEMGFADYFLIVADVMRHAHEQHIMTGPGRGSAAGSLVAYALM
ITDVDPIQYQLLFERFLNPNRANMPDIDLDIPDNRRDEVLAYVYQKYGRNHMAQIITFGT
LAAKMALRDVGRVFGLSQFEMNDWAKAIPDVLKITLKEAYQQSQPLKNLVADSTQNRLLF
ETAQKLEGLPRHYSTHAAGIVLSQAPLTDTVALQSGGEEIELTQLPMGNVEELGLLKIDF
LGLRNLGILANIVKLVGQQTGQPFDPHSIPLDDPKTLALFQQGDTNGIFQFESAGIKNVL
RRLAPNSFEDVVATDALYRPGPMENIDAFIARKNGQEPVTYPDASLADILAPTYGVLVYQ
EQVMQAASKMGGFSLGEADLLRRAMSKKKKAVIDASRTQFIQGALERGHTKSAAITVYDY
IERFANYGFNRSHAVAYSKIAFWLAYLKVHYPAAFFAALLNAVLNNPTKTKTYLAEAKKR
QIKVLPPDINLSQSYFRLVDKGIVFGLFSVKKVRRDFVTAIIQERTANGPFKSLLTFLQR
MDTKFLKQEALTALIYSGAFDQFNPNRNALLTNLADLLDSVKLAGNNVDLFTVLAPKERL
VPNLTLTERLDKESEYLGAYVSGHPVEKYDRMRRYYHVPDISDLVPEQNVHLVLFIRRIK
VIRTKKGDQMAFVTGQDATGEISITLFTGVYQRISEWLQVGQVVLVMGKVERRRDLQVVA
NQLQLAQDAQKALPQATLYLRVQVPLTVQKQQQLHQILRQNHGTTPVILYSAADKQSILL
NENYWVAGNAQTTTALTNILGTGNVILKEHN
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
ttgccatttgttcaactacaggttaagagtacctatacgctcttggaaagtaccactaaa
attgatgcactgattaaaagtgctaaggcgcgtggttatcaaagcattgcactgacggat
aaaaacgtgacttatggactggttgatttttacaaggcggccaaggcagccgagttacat
ccaatcttgggtttaacgcttgaaattggcggattacttcaaaccgatgaacggtttccg
ctaattgtattggcgaaagatttagttggctatcagaatcttttgaagctctcttctaaa
gtgatgacgcaaactgatctagtttcatttgctgatattacgcagtggttcagccattta
gtagtgatcacgccggctcaagctggtgaattagtccgcttacttttgcaagcggaggag
caaacaacggcatatttgacgcaactccaggcggcagttgatccggggagcttgtactta
ggaatcagtgccaagcaagcagcagccccccaacgtagcgggttaattgcattgagtcag
acgaccggagttccgctggttgcgttgggtgatgttcgttatctagaaccagatgatgct
ttttcagtgcaagtcttacaacatattaaagctggtacgcaagttaatctccatagtggt
gatcagacaactccaggcggctattatttacaagctgctgatcagattacggccgagttt
gaagcattgcagttggtcgaggccgtgcacaatacggataagattgcccaactctgtcaa
gttgagttgacctttaagcgggcccaattaccacgctttgaaacaccgcatcaagagtcg
gcaacggcatatctagaacagttaagtcagcaaggcttacaagctcggtttgccaatcaa
gcgattccgcaacaatatcaagaacgcttgcagtatgaattgcgagtgatcagcgagatg
ggctttgccgattatttcttaatcgttgccgatgtcatgcggcatgcccatgaacaacat
atcatgacgggcccagggcgaggatctgcggcggggtcgttggtggcctatgctttaatg
attactgatgtggacccgattcaatatcaattgttgtttgagcggtttttgaaccctaat
cgggcgaatatgccagatattgatttggatattccagataatcgccgggatgaagtctta
gcctatgtttatcaaaaatatgggcgcaatcatatggcacagattatcacctttggcaca
ctggcagctaaaatggcgttacgtgatgtggggcgtgtgtttggcttaagtcagtttgaa
atgaatgattgggctaaggcaattccggacgtgctgaaaatcacgttaaaagaagcttat
caacaatcacaaccattgaaaaatttggtggctgattccactcaaaatcgattactattc
gagacagcacagaaacttgaaggactgccacggcactactcaacgcatgcggctgggatt
gtgttaagccaagcaccgttaactgatacggttgcattacaaagtggcggtgaagagatt
gaacttacacaattgccaatgggcaacgtggaagaactgggcctactgaagattgacttt
ttagggttacgtaatttagggattcttgctaatattgtaaagcttgttggacagcaaacg
ggacagccgtttgacccacactcaattccgttggatgatcctaaaacacttgcactattc
caacaaggtgatactaatggtatttttcaatttgaatcggctgggattaaaaacgtattg
cgacggctagcaccaaattcatttgaagatgtggtcgcaaccgatgcactatatcggcca
ggtccaatggaaaatatcgacgcgtttattgctcggaagaacggacaagaaccagttact
taccctgatgcttcgttagcggatattttggcgccaacctatggtgttttggtctatcaa
gaacaagttatgcaagctgcttcaaagatgggcgggttcagtctgggtgaagcggattta
ttacggcgtgcaatgagtaagaagaaaaaggccgtcatcgacgctagtcgaacccagttt
attcaaggtgctctggaacgtggtcatacaaaaagtgcggcaataactgtttatgattat
attgaaaggtttgctaactatggttttaatcgttcacatgcagtagcttatagtaaaatt
gctttttggttggcttatttgaaggtccactatccggctgctttttttgccgctttgtta
aatgctgtcttaaataaccctaccaagacgaaaacttatctcgcagaagcgaagaaacgg
cagattaaagtactaccaccagatattaatttaagtcaaagctattttagactagttgat
aaaggaattgtttttggcttgttcagtgtaaaaaaggtgcgccgcgactttgtgacggcg
attattcaagagcgaaccgctaatgggccctttaagtcattattaacttttttacagcga
atggacacaaaatttttgaagcaagaagcgttaaccgccttaatttatagtggggctttc
gatcaattcaatccgaatcgaaatgcacttttgaccaacttagcagatttacttgatagc
gtaaaattagcagggaataacgttgatttattcaccgttttagcacctaaggagcggctt
gttccgaatttaactttaactgaacgtttggataaagaatctgaatatctaggggcttat
gtctcgggccatccagtcgaaaaatatgatcggatgcggcggtattatcatgttccagat
attagtgatcttgtccctgaacaaaatgtgcatcttgttttattcattcgccgaattaaa
gtcattcggaccaaaaaaggtgatcaaatggcatttgtaactggtcaagatgcaactggt
gaaattagtattacactctttactggtgtttatcagcggattagtgagtggctgcaagtt
ggccaagttgttctagtgatggggaaggttgaacgacgtcgtgatttacaagtagtcgct
aaccagcttcaattggcacaagatgcccaaaaagcgctacctcaagcgacactttatcta
agagttcaagtgccattgactgttcaaaagcaacaacaattgcatcaaatattacggcaa
aatcatgggacgacgcccgttattttatacagtgcagccgataagcagtcaattctatta
aatgaaaactattgggttgccggtaatgcccaaacgacgactgcgcttacaaatatttta
ggaactggcaatgttattttaaaagaacacaattaa
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integrated database retrieval system
