Latilactobacillus graminis: LG542_05370
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Entry
LG542_05370 CDS
T06857
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lgm
Latilactobacillus graminis
Brite
KEGG Orthology (KO) [BR:
lgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgm03016
]
LG542_05370 (rnz)
Enzymes [BR:
lgm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LG542_05370 (rnz)
Transfer RNA biogenesis [BR:
lgm03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LG542_05370 (rnz)
Prokaryotic type
LG542_05370 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
QFP79702
LinkDB
All DBs
Position
complement(1087600..1088538)
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AA seq
312 aa
AA seq
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MELEFLGTGAGVPARQRNVTSIALKLLDERNEVWLFDVGEATQHQILKTTLKPRKVKKIF
LTHLHGDHLFGLPGFLSSRSFQGGDEPLTIYGPKGTEEYVRTSLKISESHLTYALHFVTL
PEEGVVLDDGTFHVECAKLDHRIASYGFRIVEKDHPGELQVEKLHAAGIPAGPVYAKIKN
GEVVTLADGRQIDGKDYIGHAQKGRIVTIIGDTRQCPPIERLAMNADVLVHEGTFGKQEQ
KIAHQYFHSTNINAAKVAKAAHVKRLLLTHISARYLGQAVRELQNDARNIFKNTKVVSDL
DIYDIPFHGRKD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggaattagaatttttaggaacaggtgctggcgtaccggcccgacaacgaaacgtgaca
agtatcgcattaaaattattggatgaacgtaatgaagtttggctatttgatgttggtgaa
gcaacacaacatcaaatcttaaaaacgactttaaaaccgcgaaaggttaagaaaattttc
ctaacgcacttacatggtgatcatttatttggactacctggttttttatcaagccgttct
tttcaaggtggggatgagccattaaccatttacgggcccaaaggaaccgaagaatatgtg
cggacgagtttaaaaatctctgagagtcatttaacatacgcactgcattttgtaacgctc
cctgaagagggggttgtgcttgatgatgggacgttccacgtcgaatgcgcaaaattggat
caccggattgcaagttacggtttccggattgttgaaaaggatcatccaggtgaattgcaa
gttgaaaaattacatgcagctggcattccagctggcccagtatatgcgaagattaaaaac
ggtgaagtggtcacattggcggatggccgccaaattgatggcaaagattacattggacat
gctcaaaaaggacggattgttaccattattggggatacccgtcaatgtccaccaatcgaa
cgattagcgatgaatgcggatgttttagtccatgaggggacatttggcaaacaagaacaa
aaaatagcacatcaatattttcattcaacgaatattaatgccgctaaagtagctaaagca
gctcatgttaagcgcttgttgttgacccatatttcagcacgttatcttggtcaagctgtg
cgtgagttacaaaatgatgcccgcaatatttttaaaaacactaaagttgttagtgatcta
gatatttatgatattccatttcatgggcgaaaggattga
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