Latilactobacillus graminis: LG542_06625
Help
Entry
LG542_06625 CDS
T06857
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lgm
Latilactobacillus graminis
Pathway
lgm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LG542_06625 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgm03400
]
LG542_06625 (uvrA)
DNA repair and recombination proteins [BR:
lgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LG542_06625 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LG542_06625 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
nSTAND1
AAA_29
RsgA_GTPase
AAA_23
AAA_22
nSTAND3
AAA_25
AAA_33
AAA_21
DnaJ_CXXCXGXG
APS_kinase
NACHT
AAA_18
AAA_24
Viral_helicase1
AAA_14
ATPase
cobW
RNA_helicase
MMR_HSR1
Septin
DUF87
NB-ARC
PRK
MeaB
NTPase_1
T2SSE
FtsK_SpoIIIE
DUF1924
DUF463
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
QFP79940
LinkDB
All DBs
Position
complement(1350481..1353330)
Genome browser
AA seq
949 aa
AA seq
DB search
MANDKIVIHGARAHNLKNIDVTIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLWARVGHP
ICPNDGTEISSQSVEQMVNRVLALPEKTKLQVMSPIIRGKKGQHKKTLAKIQREGYVRVQ
VDGEIMDVSADIELDKNKKHDINIVVDRIVVKDGVRSRLFDSFEAALRLSDGYATADVIG
GEQLLFSEHYACPICGFTVGVLEPRLFSFNAPFGACPDCDGLGVKLEVDMDLVVPDTSKT
LREGALAPWNPISSQYYPQMLEQACKTFKIDMDRPFSKLTPRQKDIILNGSQGKNFHFHY
ENDFGGVRDVDVPFEGVLTNVDRRYRETNSDFTRTQMRTYMTELTCQTCHGARLNRQALA
VKVGGQDIAAVSDNAIKEALPFFEQLELSEKDSVIAKPILKEVHDRLTFLINVGLEYLTL
SRSAGTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIGSLKKMRDLGNT
LIVVEHDEDTMRAADYLIDIGPGAGELGGEVMAAGTPDEVEHNPQSLTGRYLAGSEYIPV
PLERRKGNGKKIRVIGAAENNLKDLTVDFPLGEFVAVTGVSGSGKSTLVNTILKKALAQK
MNRNSAKPGQYKTITGYQNLEKLINIDQSPIGRTPRSNPATYTGVFDNIRDLFAQTNEAK
LRGYKKGRFSFNVKGGRCEACKGDGIIKIEMNFLPDVYVPCEVCHGSRYNSETLEVIYKG
KNIAEILDMTVAEATVFFANIPKIARKLQTIVDVGLGYVTLGQSATTLSGGEAQRMKLAS
ELQKQSTGKNLYILDEPTTGLHTDDIKRLLGVLERLVEEGNTILVIEHNLDVIKTADYII
DLGPEGGDKGGTIVATGTPEEIANVSDSYTGQYLKAILERDTARTIAAQ
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgacaagatcgtaattcatggcgcacgtgcgcataatttgaagaatattgac
gtcacaattcctcgagacaaactagtggttgtgaccggtttatcaggttctgggaaaagt
tcgttagcatttgacacgctatacgcggaaggccaacgtcgttacgttgagagcctgtct
gcctatgcgcgacaatttttgggacagatggataaaccagatgttgattcaattgatggt
ttaagtccggcgatttcgattgaccagaaaacaacatctaaaaatccgcgttcaactgtt
gggacggttacggaaattaatgattatctgcgtttgttgtgggcccgcgttgggcatcca
atttgtcccaatgatggaactgaaatcagcagtcaatctgtcgaacaaatggttaatcga
gtactcgcattaccagaaaagactaagctacaggttatgtcaccgattattcgtggcaaa
aaaggtcaacataaaaaaacattggcaaagattcaacgcgaggggtatgtccgtgttcaa
gttgatggtgaaattatggatgtgagtgctgatattgaattagataagaataaaaaacat
gatattaatattgttgtggatcggattgtcgttaaagatggcgtgcgttcacgattattt
gattcatttgaagctgcacttcgtttatcagatggttatgcaacagctgatgtgattgga
ggcgaacaactccttttctcagaacattatgcttgtccaatctgtggatttaccgttggc
gtattagaaccgcggctattttcctttaacgcgccatttggggcatgtccagattgtgat
ggactcggtgttaagttagaagttgatatggatcttgtagttccagatactagcaagacg
ttacgcgaaggggccttggcaccgtggaacccaattagttcacaatactatcctcaaatg
cttgaacaagcttgcaagacatttaaaattgacatggatcggccgttcagtaaattaaca
ccgcggcaaaaagatattattttaaatgggtcacaaggtaagaacttccacttccattat
gagaatgatttcggtggtgtgcgggatgttgatgtaccttttgaaggggtgttaaccaac
gttgatcggcgttatcgtgagacaaatagtgacttcacgcggacgcaaatgcggacttac
atgacggagttaacctgtcaaacgtgtcatggagcgcggttaaaccgccaagctttggcg
gttaaggtgggcggccaagatattgcggctgtttcggataatgcaatcaaagaagcgtta
ccatttttcgaacaacttgaactttctgaaaaagatagtgtaattgctaaaccaatcttg
aaggaagtccatgatcgactaacgttcctgattaacgtcgggttggagtatctaacactc
agtcgttcggctggtacattgtctggtggggaagctcagcggattcgattggctacacag
attggttcgaatttatcaggggtactctatattctagatgaaccatcaattggtttgcat
caacgcgataatgatcgcctaattggttcattaaagaaaatgcgcgatttaggaaatacg
ttaatcgtcgttgagcatgatgaagatacgatgcgagcagctgattatttaatcgatatc
gggcctggtgctggtgagcttggtggcgaagtgatggccgctggtacgccagatgaggtg
gaacataatccacaatcattaaccggacgctatctagctggttcagagtatattccggtc
ccccttgaacgccgtaagggaaacgggaagaaaatccgggtgatcggtgcggccgagaat
aacctgaaggatctaaccgttgatttcccattaggtgaatttgtggcggtcactggcgtt
tctggttctgggaaatctactttagtcaacaccatcttaaaaaaggcattggctcaaaag
atgaatcgcaattcggcaaagcccgggcaatataaaacgattactggttatcagaacttg
gaaaaattaattaatatcgatcagagcccgattggccgtacaccacggagtaatccggca
acctatactggtgtttttgataatattcgtgatttattcgcccaaacgaacgaagcaaaa
ctacgtgggtataaaaaaggtcggtttagttttaacgttaaaggtggccggtgtgaagcc
tgcaaaggtgacgggattatcaagatcgaaatgaacttcttaccagatgtgtacgttcct
tgtgaagtctgtcatggtagtcggtataattcggaaacgttagaggtcatttataaaggt
aaaaatattgctgaaattttagacatgaccgtcgccgaggcaaccgtcttttttgctaat
attcctaagattgcccgaaaattacaaacaattgtcgatgttggactaggctacgtaact
ttgggccagtcagcgactactttatcaggtggggaagcgcaacggatgaagttggcgtct
gaattacaaaagcaatcaacgggtaagaatctttatatccttgatgaaccaacgactggt
ttgcatactgatgatattaaacgtttattaggcgttttggagcgactggttgaagaaggc
aatacgattttagtaattgaacataatttggatgtcattaagacagctgattacattatt
gacttgggaccagaaggcggcgataaaggtggtacaattgttgccactggtacaccagaa
gagattgctaacgttagtgatagttacacaggccagtatttaaaagcgatactagaacgt
gatacggcacgcaccatcgccgcccaataa
DBGET
integrated database retrieval system
