KEGG   Latilactobacillus graminis: LG542_06790
Entry
LG542_06790       CDS       T06857                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
lgm  Latilactobacillus graminis
Pathway
lgm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lgm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LG542_06790 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgm03019]
    LG542_06790 (rny)
Messenger RNA biogenesis [BR:lgm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LG542_06790 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B KH_NusA_2nd KH_2 Colicin_V
Other DBs
NCBI-ProteinID: QFP79970
UniProt: A0ABX6C8M4
LinkDB
Position
complement(1386142..1387704)
AA seq 520 aa
MNLAFPLILAVIMLIVGLLVGSVLQKKAHEREIDGANKTATGIIAAAEKEAATRKKEILL
EARDENHRYRSEIEDELKDRRSEVQKQENRLIQREETMDRKDATLDKKERSLEQRENHLT
NEAQALSEKQVVADNLVEQQRAKLQEIAELSHDEAQKIILDETKQSLEHERAVLIKESEE
SAKEHADRTARTLVAEAIQRSAADMVAETTVTVVTLPNDDMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVVLSGFDPIRREIARMTLEKLIQDGRIHPARIEEMVDKSRKEMDEQIR
QIGEQAIFDVGVHTMHPDLIKTIGRLHFRTSYGQNVLNHSIEVAKLAGILAAELGEDVTL
AKRAGLLHDIGKALDHEVDGSHVEIGVELATRYKEPATVVNAIGSHHGDTEATSIISVLV
AAADAISAARPGARSESLENYIHRLEKLESITNSFKGVDHSFAIQAGREVRVIVKPEQVT
DDQATVLARDVKNQIENQLEYPGHIKVTVIRETRTVEYAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgaacttagcttttccattaatcctcgcagtcatcatgttaatcgttggtttactagtt
ggttccgttctacaaaagaaggcgcacgaacgtgaaattgatggtgcaaataagactgcc
acaggaataatcgcagcagctgaaaaagaagccgcaacgcggaagaaagaaattctcttg
gaagcaagagatgaaaatcaccgctatcgctctgaaattgaagatgaattgaaagatcga
cgcagtgaggtacaaaagcaagagaatcggttgattcaaagagaagaaacaatggatcgt
aaagatgcaacgttggataaaaaagaacgttcattggagcaacgcgagaatcatttaaca
aacgaagcgcaagcacttagtgaaaagcaggttgtcgctgataatttggttgagcaacaa
agagcgaaattgcaagaaattgctgagttatcgcatgatgaagcgcaaaaaatcatttta
gatgaaacaaaacaaagtctcgagcacgaacgagctgttttgatcaaagaaagtgaagaa
tcagctaaagaacatgccgaccggactgcacggacattagttgccgaggccattcaacgg
agtgcagcagacatggttgctgaaaccacagtgacggtcgttaccttgccaaatgatgat
atgaaggggcggattatcggtcgtgagggccgtaatattcggactttggagacgttgacc
gggattgatctgattattgatgatacgccagaagcagttgtattaagtggctttgatccg
attcgtcgtgaaattgcgcgcatgacgttagaaaagttgattcaagatggccggattcat
ccagctcggattgaagaaatggttgacaagtcacgaaaggaaatggacgaacagattcga
cagattggtgaacaagcaatctttgatgttggtgtgcatacgatgcatcctgatttaatc
aagacaattggccgcttacacttcagaaccagttatggtcaaaatgtcttgaaccattca
attgaagtggcgaaattagcgggcattttagcggctgaattaggtgaagatgtgacactc
gctaaacgagctggcttgctacatgacatcggtaaggccctcgaccatgaggttgatggc
tctcacgttgaaattggcgtggaactggcaacgcgttataaggaaccggcgacggttgtc
aatgcgattggttcacatcacggcgacactgaagcaacatcgattatttcagtcttagtc
gcagcagccgatgcaatttctgcagcacgcccgggggcccgttctgaatcactcgaaaat
tacattcatcgtcttgaaaaacttgaaagtattacgaatagttttaaaggcgttgatcat
agttttgcgattcaggctggtcgtgaggtgcgggtgattgttaaacctgaacaagttaca
gatgaccaagcaacagttttagcgcgcgatgtaaaaaatcaaattgaaaatcaactcgag
tatcctggccatattaaggtgactgtgattcgtgaaacaagaacggttgaatacgcgaag
taa

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