Companilactobacillus ginsenosidimutans: ABM34_01925
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Entry
ABM34_01925 CDS
T03990
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lgn
Companilactobacillus ginsenosidimutans
Pathway
lgn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABM34_01925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgn03400
]
ABM34_01925
Enzymes [BR:
lgn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABM34_01925
DNA repair and recombination proteins [BR:
lgn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABM34_01925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
UvrD-helicase
PIF1
nSTAND3
SLFN-g3_helicase
AAA_22
UvrD_C
AAA_12
T2SSE
Mg_chelatase
Herpes_Helicase
DEAD
AAA_29
IMS_HHH
AAA_28
NPHP3_N
RsgA_GTPase
HHH
NTPase_1
AAA
AAA_16
TsaE
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
AKP66428
UniProt:
A0A0H4QIF8
LinkDB
All DBs
Position
340401..342806
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AA seq
801 aa
AA seq
DB search
MTETQEKQYFVGTVKAIFFENPDNLFKIFTIKIKKTNTDWNATDIVITGSFGEISEEEEY
KFEGHLVDHPKYGKQFQAETYHHSRPSGRKALINFFAGDEFPGIGKKTAEKIVDKLGDNA
IDKIVRDPNALDFLKLGKEKTKKVVDQIANSNQAEQMLFELSNFGFGNTLSARIYQRYGG
KTLDIINEDPYKLVLEIKGIGFKRADELARQLGIPEDDPRRIKGALIQIVSDIVNGSGDS
YVKKDFLIQRALGTLRSYNTGNDLQEKINDCLKSLVNDGALIVEDNRVYDKDIFESEWSI
AQSMKMIVDSYKGSDWKQSDYDDGLAKVEKQFKVQYDDSQQKAIEAALSHSIFLLTGGPG
TGKTTIINGIVAMYAKLNDATLDPSAEDYSIALAAPTGRAAKHMGETTGLPAMTIHRLLG
LTGTDDDETAEPTLDCKLLIIDEMSMVDTRLFKILITSVPPGTQVVLVGDRDQLPSVGPG
QIFADLIKSEIFPTSILTDIHRQDDSSTIIQLAHDVNQGVVNQDVFINKSDRSFIPVTSR
NVPEVVSQIVSKSGERGFDISDVQILAPMYRGTAGIDNLNSTIQDVVNPMTPKRKEVSVG
NVHYRIKDKVVYLVNSPEDNVFNGEIGIIVGIILAKENTDKVDKIVIDFDGNEVTLDRKD
WISNIALAYCTSIHKAQGSEFEMVILPLVNEESRMLRRNLLYTAITRSKKLLIMVGDQSA
FQQSIQDKSTARNTTLRERLNNVFNKTTGAKNEITKNDEKQVEAVPDNDYLTLDKVMSNA
INPMIGMENITPFDFMKKVNN
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaactcaagaaaaacaatattttgtcggcacagttaaggcaatcttttttgaa
aatccagataatttatttaagattttcactattaaaataaaaaaaacgaataccgattgg
aacgctactgatattgttattactggaagttttggtgaaatctctgaagaagaagagtac
aagtttgaggggcatttagttgaccatccaaaatatggcaaacaatttcaggctgagacc
taccatcacagtcgccctagtggtcgaaaagcactgattaacttttttgctggggatgaa
tttcctggtataggtaaaaagactgctgaaaagattgtcgataagctaggtgataatgct
attgataaaatagtgcgagatcccaatgctttggattttttaaagttaggtaaggagaag
actaagaaagtagtcgatcaaattgcgaatagcaatcaagctgaacaaatgctgtttgag
ttgagtaattttggattcggaaataccttatcagcacgtatttatcaaagatatggcggt
aaaactttagatattatcaacgaagacccgtataaattagtattggaaatcaaagggatt
ggttttaagagagcggatgaactggcaagacagcttggcattccagaagatgatccgcga
agaattaagggagcattgatacaaatagtatcagacattgttaatggttcaggagattcc
tatgtaaaaaaggatttcttaatacaaagagctctcggcacgctgcgttcatacaataca
ggcaatgacttgcaagaaaagatcaatgattgtttgaaatcactggttaatgacggtgca
ttaattgtcgaagacaatcgagtgtatgataaggatatttttgagagtgaatggtcaatc
gcccagtcaatgaaaatgattgttgattcatataagggtagtgactggaaacaatctgat
tacgacgacggactggcaaaagttgaaaaacaatttaaagttcaatatgacgattcacaa
caaaaggcaattgaagctgctttaagtcattctatatttctattaacgggtggtccggga
actggtaaaacgaccataattaatgggattgtggcaatgtatgcaaaattaaatgatgcc
acgcttgacccttctgcagaagattattcgattgctcttgctgcaccaactggtcgtgct
gcaaaacatatgggtgagactactggtttaccagctatgacaattcatcgtttactagga
ttgacagggacggatgatgatgaaactgcggaaccaacgctggactgtaaattgttgatt
attgatgagatgtcgatggttgatactcgattattcaagattctgattacatcagtgcca
ccaggcactcaagtcgtgttagtgggtgatagagatcaacttccatcagtcggacctgga
caaatttttgcagatttgattaaaagtgagatcttcccaacaagtattttgactgatatt
caccgacaagatgacagttcgaccattattcaattggcacatgatgtgaatcaaggtgtt
gtaaatcaagatgtgtttattaataagtcggatcgtagttttattccggttactagccga
aatgttcccgaagttgtctcacaaattgtaagtaaatctggtgagcgtggctttgacata
tcagatgttcaaattttagcaccgatgtatcgaggaactgccggaattgataatttgaat
tcgacaattcaggacgttgtcaatccgatgacaccaaaacgtaaggaagttagtgtcgga
aatgtccattatcgaattaaggataaggtagtttacttagttaattcaccggaagataac
gtttttaatggagaaattggaattattgtcggtattattcttgccaaagaaaatactgat
aaagttgataaaatagttattgatttcgatggtaatgaggttactttagataggaaagat
tggatttcaaatattgcgttggcatattgtacgtccatccacaaagctcaaggctcggaa
tttgaaatggtcattttaccattggttaatgaagagtctcgcatgttaagacgtaatcta
ttgtatacagcaattacgcgctcgaagaaactactaattatggtaggagatcaatctgct
tttcaacaatcaattcaagacaagtcaactgccagaaacactactcttcgtgaacgtttg
aacaatgtatttaacaaaacaacaggcgctaaaaatgaaattaccaaaaatgatgaaaaa
caggtcgaagctgtacccgacaacgattatttaacgctagataaagtaatgtcgaatgca
atcaatccaatgataggtatggagaacattacaccatttgattttatgaagaaagttaac
aactaa
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