Companilactobacillus ginsenosidimutans: ABM34_02330
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Entry
ABM34_02330 CDS
T03990
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lgn
Companilactobacillus ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
lgn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgn03016
]
ABM34_02330
Enzymes [BR:
lgn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
ABM34_02330
Transfer RNA biogenesis [BR:
lgn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
ABM34_02330
Prokaryotic type
ABM34_02330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AKP66503
UniProt:
A0A0H4QIK7
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All DBs
Position
428674..429603
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AA seq
309 aa
AA seq
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MELEFLGTGAGVPSKGRNVSSTALKLLDERNEVWLFDVGEATQHQILETTIRPRKITKIF
ITHLHGDHIFGLPGLLSSRANQGGNTPLDLYGPVGIKKFVETSLSVTGTKLGYKINYVEL
KNGGEIFNDKTFSVTAGKLEHRITCFGYRVVEKPRTGELLVDKLAEYHIPNGPVYGKLKA
GEKVTLSDGTELDGKDFIGPDKPGKTVAIISDTRYTPEIDKLADHADVVVHESTFSDDDK
KLAYNYFHSTATSAAKVAKKCHAKGLLLTHISARYTGKSALVLQNEARKIFDNSRVVNDF
DIYEVPFNQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaattagaatttttaggaacaggcgctggagtaccgtcaaagggaagaaacgtctca
agtacagcattaaaattgcttgatgaacgtaatgaagtctggttgtttgatgttggtgaa
gcgacacaacatcaaattttagagaccactattaggcctcggaaaatcacaaaaatattt
attactcatttgcatggtgatcatatttttgggcttccaggtttgttatctagccgtgca
aatcaaggtggaaacactcccttagatttatatgggccagtagggatcaaaaagtttgtc
gaaacctcactttcagttacaggtactaaattaggatacaagattaactatgttgagttg
aaaaatggtggagaaatttttaacgacaagactttctcagtaaccgctggtaaacttgaa
catcgaattacttgtttcggataccgggtagttgaaaagcctcgtacaggcgagttacta
gttgataaattggctgagtatcatattccaaatggaccagtttatggaaagctaaaagct
ggcgaaaaggttacactgtctgatggaacagagttagatggtaaagattttattggtcct
gataagcctggtaaaacagttgctatcatttctgatacacgctatactcctgagattgat
aagttagcagatcatgctgatgtagttgttcatgaatcgactttttcagatgatgataag
aaattggcttataattatttccattcaacagcaacttcagccgctaaagttgcgaagaaa
tgtcatgcaaaaggattattgttaacacacatttccgctagatatactgggaaatctgcc
ttagtattacaaaatgaagcacgtaaaatttttgacaatagtcgagtagttaatgatttt
gacatttatgaagttccgtttaatcaatag
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