Companilactobacillus ginsenosidimutans: ABM34_02905
Help
Entry
ABM34_02905 CDS
T03990
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lgn
Companilactobacillus ginsenosidimutans
Pathway
lgn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lgn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABM34_02905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgn03021
]
ABM34_02905
Transcription machinery [BR:
lgn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABM34_02905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Penicillinase_R
RIN1
Motif
Other DBs
NCBI-ProteinID:
AKP66604
UniProt:
A0A0H4QE16
LinkDB
All DBs
Position
complement(554928..556076)
Genome browser
AA seq
382 aa
AA seq
DB search
MAAKKTTVSKTRTKKVVKSSKELESAIKALIKDKKKKGSVTEAELTEQLIKPFSLKDKTL
DDTLEQLQDKGIAVTDDDGNPSKMALLSEKKREKAPSSKDTAAPTDIKVNDPVRMYLKEI
GRVPLLNAQQEVDLALKIEQGDEEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNM
GLMKAVEKFDYRLGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQL
LQDLGREPLPEEIGAEMDMPTTKVRDILKIAQEPVSLETPIGEEDDSHLGDFIEDSDATS
PEDHASYELLKEQLENVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQI
EAKALRKLRHPSRSKQLKDFLE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaagaaaacaacagtatcaaagacaagaacaaaaaaagttgttaaatcaagt
aaagaattagagtcagcaattaaggctcttattaaagataagaagaaaaagggttcagta
acagaagctgaacttacagagcaactcatcaaacctttctctttaaaagataaaactctt
gatgacactctagaacaattgcaagacaagggtattgctgttactgatgatgatggtaat
ccaagtaaaatggctttattaagtgaaaagaagagagaaaaagctcctagttctaaagat
accgccgcaccaactgacattaaggttaatgatccagttcgtatgtatcttaaggaaatt
ggtcgtgttcctcttcttaatgctcaacaagaagtcgatttggctttgaagattgaacaa
ggtgatgaagaagctaagcaacgattggctgaagccaatttacgtttggttgtttcaatt
gccaaaagatatgtcggacgtggaatgcaattcttggatttgattcaagaaggtaatatg
ggcctaatgaaagccgttgaaaaattcgactatcgacttggtttcaagttttctacatat
gcaacctggtggattagacaggctattacgcgtgccattgctgaccaagcaagaacaatt
cgtatccctgtacatatggttgaaactatcaacaagttaatcagaattcaacgccaatta
cttcaagaccttggtcgtgagccattgccagaagaaattggtgctgaaatggatatgcca
actacaaaagttcgtgatatcctaaagattgctcaagaaccagtttcactagaaacacct
attggtgaagaggacgattctcatcttggtgacttcatcgaggattctgatgctactagt
cctgaggaccatgcatcttatgagttattgaaggaacaattagagaatgttcttgataca
ttgacagatcgtgaagaaaacgttctacgtttacgtttcggtctcgatgacggaagaacg
agaacactagaagaggtaggtaaggtcttcggtgttactcgtgaaagaattcgtcaaatc
gaagctaaagcactacgtaaactgcgtcacccttcaagatcaaagcaacttaaagatttt
cttgagtaa
DBGET
integrated database retrieval system
