Companilactobacillus ginsenosidimutans: ABM34_03770
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Entry
ABM34_03770 CDS
T03990
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lgn
Companilactobacillus ginsenosidimutans
Pathway
lgn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABM34_03770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgn03400
]
ABM34_03770
Enzymes [BR:
lgn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ABM34_03770
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABM34_03770
DNA repair and recombination proteins [BR:
lgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABM34_03770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
RNHCP
Ribosomal_S13
DUF7573
MspA
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AKP66769
UniProt:
A0A0H4QEG1
LinkDB
All DBs
Position
complement(723943..724770)
Genome browser
AA seq
275 aa
AA seq
DB search
MPEMPEVETVRRGLVEQVKNKKIVNVEILYQNLITGNVDEFIETVTNARITNIGRRAKFL
LIYLDNGYTIISHLRMEGKYRVSSDESAIDKHSHAIFTLDDGQMLIYNDVRKFGRMQLWP
TATLDSNKSLVKLGPEPLSDSFTFENIKPRIVKHRKDIKTVLLDQSVMSGLGNIYVDEVL
WQAKIHPETPANHLTDEDIKIIIDCSNKEIQTAIISGGSTVRSYLDANGHKGTMQDRLKV
YGKEGEPCARCGTTIEKIKVGGRGTHFCPKCQVVK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaatgcccgaggtagaaactgttcgtcgagggttagtcgaacaagttaaaaat
aaaaagatagttaatgttgagattttgtatcaaaatctgattacaggaaatgttgacgaa
tttatcgagactgttacgaacgctcgtatcactaatattggacgtcgtgcgaaatttctc
ttaatttatttagacaatggctatacgattattagtcatttgagaatggaggggaagtat
cgtgtatcatcagatgaatccgcgattgataagcattctcatgcaatattcacattagat
gatggacagatgttgatctataacgatgttagaaagtttggtcggatgcaactttggcca
acagcaacattagattcaaacaagtcattggtgaaattaggccctgagcctctttcagac
agtttcacttttgaaaatatcaaaccgcgaatagttaaacatcgcaaggatattaagacg
gtcttattggatcagtcagtaatgagtggactgggtaatatttatgttgatgaagttttg
tggcaagcaaaaattcatcctgagaccccagccaatcatttgactgatgaagacatcaaa
attattatcgattgctctaataaagaaattcagacagcaattatttctggcggttcaaca
gtccggtcatatttggatgccaatggtcataaaggaactatgcaggaccgattgaaagtg
tatggcaaagaaggcgagccttgtgcacgttgtggtacaactatcgaaaaaattaaagtc
ggtggtcgtggaactcacttctgtcccaagtgtcaggtagtcaaatga
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