Companilactobacillus ginsenosidimutans: ABM34_03775
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Entry
ABM34_03775 CDS
T03990
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lgn
Companilactobacillus ginsenosidimutans
Pathway
lgn03030
DNA replication
lgn03410
Base excision repair
lgn03420
Nucleotide excision repair
lgn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABM34_03775
03410 Base excision repair
ABM34_03775
03420 Nucleotide excision repair
ABM34_03775
03440 Homologous recombination
ABM34_03775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgn03032
]
ABM34_03775
03400 DNA repair and recombination proteins [BR:
lgn03400
]
ABM34_03775
Enzymes [BR:
lgn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABM34_03775
DNA replication proteins [BR:
lgn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABM34_03775
DNA repair and recombination proteins [BR:
lgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ABM34_03775
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABM34_03775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AKP66770
UniProt:
A0A0H4QZ54
LinkDB
All DBs
Position
complement(724784..727441)
Genome browser
AA seq
885 aa
AA seq
DB search
MSKNKKLLLIDGNSVSFRAFFAMHNVLDKFVTGDGVHTNALYAFNNMLDIILKEEKPTSA
LVAFDAGKTTFRTEMFSDYKGTRAKTPPELMEQLPLIKEMLNLRGIKTYELKNYEADDII
GTMSRLGDEGDMDVTIITGDRDLTQLTTDKVTVRVNVKGVTETEAYTPAHVKEKLGITPD
QIIDMKGLMGDNSDHYPGVEKVGEKTAIKLINEYGNMEGLYEHVDEMKKSKLKEHLIHDK
DQAFLSKKLATINKDAPIEIGLTDLEYVGDNQEQLIKFYQKMGFNSFLEKMNIDTSETVE
KLATIDFLELNDDTVKTIISDKSPQTIVVENLDENYHVEPIIGLAIESAGKYYATDDVSI
LENIELQNWLNDATKEKYVFDYKRTIALLNRYGAKISGVSFDMLLVAYLLDTNDNKTDIG
LVAQNYGHQLPTEDEFYGKGVKKAVPEDSKDLSNYLCQQAQVINTLHDQMLKELKDNDQD
SLYDEIELPLTIVLSDMELQGVTVNVSQLKEMENSFAERLAEIEKNIYKEAGQEFNINSP
KQLGVVLFEDLKLPVIKKTKTGYSTAVDVLEKLKDKSPVVQDILDYRQISKINSTYAVGL
QKFIQPDNKIHTIYQQTLTQTGRLSSIEPNLQNIPIRIDEGRQIRKAFVPQHEDWEMFSA
DYSQVELRVLAHISGDENMQEAFKEDYDIHAHTAMRIFGLNSTDEVTPDMRRKAKATNFG
IVYGISDYGLSQNIGITRKEAAQFIENYFEQYPGVKKYMDDIVKFARENGYVETIMHRRR
YLPDIHAKNFALRNFAQRTAMNTPIQGSAADIIKVAMINMQKKLQELDLKANLLLQVHDE
MIFEAPKSEIETLEKLVPSVMDSAVKLDVPLKVESAHGKTWYEAK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaataaaaaattattactaattgatggaaatagtgtttcctttagagcattt
tttgcgatgcacaacgttcttgacaagtttgtgactggtgatggtgttcataccaacgct
ctttatgcatttaataatatgttagatattattttaaaagaggaaaaaccaactagtgct
ttagttgcttttgatgctggaaagactactttcagaactgaaatgttttctgattataaa
ggaactcgtgccaagactccaccagaattaatggaacaattgcctttgattaaagagatg
ctcaatcttcgtggcatcaaaacctatgagttaaaaaattacgaggctgatgatattatc
gggactatgtcacgtttaggtgatgaaggtgatatggacgtaaccatcattaccggtgat
cgtgatttaactcaattaactacggataaagtaaccgttcgtgtaaatgtgaaaggtgtt
actgagactgaggcatatacaccggcacatgttaaggaaaaattagggattactcctgac
caaattattgatatgaagggattaatgggtgataactcagaccattatcctggtgttgaa
aaagttggtgagaagactgctatcaaattaatcaacgaatatggaaatatggaaggcttg
tatgagcacgttgatgaaatgaaaaagagcaagttaaaagagcatctgattcatgacaag
gatcaagcttttttgagtaagaaattagcaaccatcaataaagatgctccaattgaaatt
ggattgacggacttggaatatgtcggcgacaatcaagagcaattaatcaagttttatcaa
aagatgggatttaattcatttcttgaaaagatgaatattgatacgtctgaaacggttgaa
aaacttgctacaattgattttctcgaattaaatgatgatactgttaaaacaatcatctca
gacaaaagtccgcaaactatcgtcgtagaaaacttagatgagaattaccatgttgagcct
attataggattggcaatcgaaagcgctggtaaatattatgcaactgatgatgtttcaatc
ttagagaatattgaattacaaaactggttgaatgacgctactaaagaaaaatatgttttt
gattataaacgtacgattgctttgttgaatcgctatggcgcaaagatttctggagttagt
ttcgatatgttgcttgtagcttacttacttgatactaatgacaacaaaactgatattgga
ttagttgcccaaaactatggtcatcaattaccaactgaagatgaattttatggaaaaggt
gttaaaaaggcagttccggaagattcaaaggatttgagtaattacctttgccaacaagct
caagtaatcaacacacttcatgatcaaatgttaaaagaactcaaggacaacgatcaagat
agtttatatgatgaaattgagttacctctaacaattgttttgtcagatatggaacttcaa
ggtgtaactgtcaatgtttctcaattaaaggaaatggaaaattcatttgctgagagattg
gcagaaattgaaaagaatatctataaagaagctggccaagaatttaatattaattctcct
aaacagcttggtgttgtcttatttgaagatttgaaacttcctgtaattaagaaaactaag
accggttactcaacagctgttgatgttttggagaagttaaaagataagtcaccagttgtt
caagatattttagattatcgtcaaatttcaaagatcaactcaacttatgcggttggtctg
caaaaatttattcaacctgacaacaagattcacacaatctatcaacaaacgttgacacaa
acgggccgtttgtcatcaattgaacctaatttacaaaatattcccattcgtatcgatgaa
ggtagacaaattaggaaggcttttgttcctcaacatgaagattgggaaatgttttctgct
gattattctcaagttgaattacgtgtactcgcacatatttcaggtgatgagaacatgcaa
gaagcatttaaggaagactatgatatccatgcgcacacagctatgcgtattttcgggttg
aatagtactgatgaagttacacccgatatgagacgaaaagcaaaagctactaacttcggt
attgtttatggaattagtgattatggtctttcccaaaatattggaattactcgtaaggaa
gctgctcaattcatcgaaaattattttgaacagtatcctggagttaaaaagtatatggat
gatatcgtgaaatttgctcgtgaaaatggttatgtcgagacaattatgcatcgccgccgt
tacttgccagacattcatgctaagaattttgcattacgtaattttgctcaaagaacagct
atgaatacgccaatacagggtagtgcggcagacatcatcaaagtagctatgattaatatg
caaaagaaattacaagaacttgatttaaaagctaatttattattacaagtacatgatgaa
atgatttttgaagcaccaaaatcagaaattgaaacattagaaaaattagttccgagtgtc
atggattccgctgtgaaactagatgttcctttgaaagttgaatcagcacatggtaaaaca
tggtacgaggcaaaatag
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