Companilactobacillus ginsenosidimutans: ABM34_04810
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Entry
ABM34_04810 CDS
T03990
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
lgn
Companilactobacillus ginsenosidimutans
Pathway
lgn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ABM34_04810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgn03400
]
ABM34_04810
DNA repair and recombination proteins [BR:
lgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
ABM34_04810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
DUF4358
ATG17_like
AAA_22
Spectrin_SESTD1
HAAS
YxxD
Motif
Other DBs
NCBI-ProteinID:
AKP66915
UniProt:
A0A0H4QZN8
LinkDB
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Position
complement(899655..902009)
Genome browser
AA seq
784 aa
AA seq
DB search
MNNKALNVLEFDKIKDEIAKYLITSRGQALLKKLMPMSVESIVHRLIDQTKDGMDIVRLK
GEIPVRKLEDLHDQANRLKKDGNLNGTELAAIGQVLKNTAELKAFFEQLHDDEVALRELF
NLSNDLIDNPVLTRRIDKSIDESGRVLDTASEDLQYIRNQINKLNETIRQSMEQYTRGKN
TKYLTEAIVTLRDDRFVVPVKTEYRAKFGGVVHDQSASGQTLYIEPQAVVGLNNQLHDAQ
TSERLEETRILAELSDLVRPEIDDIVKNNEVLAQFDLINAKAKYANQIKGTEPLISRDNI
VDLKEAKHPLIDPDRVVANDIKIGDDYRTMLITGPNTGGKTISMKTLGLLQIMAQAGLFI
PAHEESQIGVFDEVFVDIGDEQSIEQNLSTFSSHMDNIINIMKNVSERSLVLIDELGAGT
DPQEGAAIAIAILEKLSESNCEIVATTHYPELKIYAYNAEKTINASMEFDDKSLKPTYRL
LIGIPGASNALNIAARLGMDNEVITRGRSLMSGESQDLNNMINDLEKRRKEFEANNIELE
QQLEKNKKVEESFETERTALENSKDSEIQAAKVRANQIVSSTKKKSEKIIDRLKELERSG
NAVKADQIISARTDLKNLHQEDVSKKNRVLRRAKRRQELKVGDDVKAIPYGQFGTIVRKD
KNNKYEVQLGILKMKFDAADLEKTQSKPEEKESKPTMVRRTKSTSLSSKLDLRGERYEEA
MTDLDNYIDEALLAGYNQVTIVHGFGTGVIRNGVTKYLQGNPRVKSFGYAPASSGGSGAT
IVDL
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaagcgttaaatgttttagagtttgacaagatcaaagatgaaattgccaaa
tatctaataacatcacgtggacaagctttgcttaaaaagttaatgcccatgtcggttgaa
tcaatcgttcatcgattaatcgaccaaacaaaagacggaatggatattgttcgtctaaaa
ggtgagattcctgttcgtaagcttgaagatttgcatgatcaagctaatcgtcttaaaaaa
gatggtaatttaaatggtacagaactagctgctattggacaggttttgaaaaacactgcc
gaattgaaagctttcttcgaacaacttcatgatgatgaggttgcacttcgtgaactattc
aatttgagtaatgatttaattgataatcctgttttaactagaagaattgataaatctatt
gatgaatcgggtcgtgtacttgatactgcatctgaagatttgcaatacattcgcaatcaa
attaacaaattaaatgaaacaatcagacaatcgatggaacaatatactagagggaagaat
actaagtatttgaccgaggcaattgttactttgcgtgacgatagattcgttgtgcctgtt
aaaacggagtacagggccaaatttggtggtgtcgtccacgatcaaagtgctagtggacaa
acactttatattgagcctcaagctgttgtgggcttaaataatcaactacatgacgcccag
acttctgagagattggaagaaactagaattctagctgaactatctgatttggttagacct
gaaattgatgacattgtcaaaaacaatgaagttttggcccaatttgatttgatcaatgcc
aaagctaagtatgctaatcaaattaaaggaactgagccattaatttcacgtgacaatatt
gtcgatttgaaagaggccaagcacccattgattgatcccgatagagtagtggccaatgat
attaaaattggtgacgactatcgaactatgttgataactggtcctaatactggtggtaaa
acaatttcgatgaagacattggggttgcttcaaatcatggctcaagctggtttgtttatc
ccagctcacgaagaaagccaaattggtgtatttgacgaagtgtttgttgatattggagac
gaacagtctatcgagcaaaacttaagtactttctcatctcatatggacaacatcattaat
attatgaaaaacgtttcagaacgtagtttagtgttaattgatgagttaggtgctggtact
gatccacaagaaggtgcagctatcgcgattgccattttggaaaagttatctgagtctaac
tgcgaaattgttgccacaacccattatcctgagttgaaaatttatgcatacaatgctgaa
aaaacaattaacgccagcatggagtttgatgacaagtcacttaaaccaacttatcgattg
ttaatcggtattcctggagcaagtaacgccttgaatattgctgccagattaggcatggac
aatgaggtcattactcgtggaagatcattgatgagtggtgaaagccaagacttgaataat
atgatcaatgatttggaaaaacgtcgtaaagaatttgaagcaaacaatattgaattagaa
caacaacttgagaaaaacaagaaggttgaagaaagcttcgaaactgaacgcacagcatta
gagaattctaaagacagtgagattcaggctgccaaagtacgagccaatcaaatagtttcc
agcaccaagaagaaatctgagaagatcatcgatcgtctgaaagaattggaacgttctggg
aatgcagttaaggctgatcaaattatttcagcaagaactgatttgaagaatttacatcaa
gaagatgtttctaagaaaaatcgtgttctacgtcgagccaagcgccgtcaagaactcaaa
gtgggggatgacgtcaaggctatcccttatggtcaattcggtacaattgttcgaaaagat
aagaataataagtacgaagttcagttaggtattttaaaaatgaaatttgatgccgctgat
ttggaaaaaacacaatctaaaccagaagaaaaagaatcaaaaccaacgatggttagaaga
actaagagtacttcactttcaagcaagctagatttacgtggtgaaagatatgaagaggcc
atgactgatttggacaactacattgatgaagccttattagccggctataatcaagtaacc
attgttcatggatttggtactggtgttattaggaatggtgttactaagtatttgcaaggg
aatccacgagttaagtcatttggatatgcgccagcaagttctggtggatctggagcgaca
atagttgacttgtag
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