Companilactobacillus ginsenosidimutans: ABM34_05300
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Entry
ABM34_05300 CDS
T03990
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lgn
Companilactobacillus ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
lgn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgn03016
]
ABM34_05300
Enzymes [BR:
lgn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ABM34_05300
Transfer RNA biogenesis [BR:
lgn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABM34_05300
Prokaryotic type
ABM34_05300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AKP67010
UniProt:
A0A0H4QZZ1
LinkDB
All DBs
Position
complement(992699..993442)
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AA seq
247 aa
AA seq
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MTNYKLTIAYDGSNFHGFQRQPDQRTVQGILEKVLSKMTKGKHVEVLGSGRTDAGVHAFG
QVVSFQYPGNIPADSMLKAVNSLLPLDVITKKSEIVADDFHARFGVKKKTYSYRVDCGHY
TDPFKRFYTGHYPYSLDVHKIEDAIVDLIGEHDFTSFAASGGVIENKVRTIYDANVKYLE
DSNELVFEFTGNGFLYNMVRILVATLLEIGNGRRPVHDFQRLFEVKDRQEARGTAPASGL
YLKEVFY
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgacaaactataaattgactattgcctatgatggttcaaactttcatggctttcaaaga
cagccagatcagagaacagttcaaggcattttagaaaaagttttatccaagatgactaaa
ggtaaacatgtcgaggtacttggttcaggtagaactgatgcgggtgtgcatgcttttgga
caagttgtttcgtttcagtatccaggtaatattcctgccgatagcatgctaaaagctgtg
aactctttattgccactggatgtaataacaaaaaaatcagaaatagtcgcggatgacttt
catgccagatttggtgttaaaaagaaaacgtactcttatagagtagactgtggtcattac
actgatccgtttaagcgattttatacaggacattatccgtactcactcgatgttcataag
atagaggatgcaatcgttgacctcattggagaacatgatttcacaagttttgctgcatct
ggtggggttattgagaataaggttcgtaccatctatgatgcaaatgttaagtatttagaa
gatagtaatgaattagtattcgagtttacaggtaacgggtttttatacaatatggtgaga
atattagttgccacgttattagaaataggtaacggtcgacgtccagtacatgattttcaa
cggttatttgaagtaaaagatcgtcaagaagcccgtggaacagcacctgctagtgggcta
tatttaaaagaagttttttattga
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