Companilactobacillus ginsenosidimutans: ABM34_07445
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Entry
ABM34_07445 CDS
T03990
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lgn
Companilactobacillus ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
lgn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgn03400
]
ABM34_07445
DNA repair and recombination proteins [BR:
lgn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABM34_07445
Archaeal homologous recombinant proteins
ABM34_07445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AKP67387
UniProt:
A0A0H4QHF4
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All DBs
Position
1441389..1444553
Genome browser
AA seq
1054 aa
AA seq
DB search
MKPVYLEMKYFGPHEDSIIDFRALEEAPIFLIGGDTGAGKSTIFDAMTYALFGSTTGDRD
AKELRSQFAPDDEATEVVFYFEQGNQLYEMTRTPEQYLTKKRGSGLGKKVATVKLAIVKE
VGGVEVQSVASKPVDVGNEIASILNLTADQFKKIILLPQNDFSEFLKSKTNDKEVILKKI
FGTQMFTDFTTELKGKYDEARKQSEGFETRLQFELESNIWTDEEKEQLSAEANSQKVELL
NKYVQTRSNSLSDLKKSKVSIDKSVEKADMDYQVAKDLQKKFADLEKYKLEFKTKITDKA
EQHKSEQVHLSELQWANPLKDIVRDLATKTSDHQQSLKTQVEQSNAENLSEEAYQKAKVL
SDTLSGQSDDIEKKKSQITQLTALIPRVESIEQLRQKLEVAKPKLAVLQKQLDEQSEAAK
LISDKITLKNKQLVPTADLQKTRNSLTKEKETFVETLTPLLNLVTNLDSDIRQENVNLGQ
LKSEQVAKQSALDVAKKNYDKQISRRQGLMIAQLQKELVDGEPCVVCGSTDHSNMVHTVD
ANETELKAAMEQVDQSQNTFAAAEKSLSTVKGNVVKSEAELKSKTVSLDKAKSDLSVTYK
QLTEKSDLNFSDKFSLEQVKHSFDTKISDVDRELTTANNLSNEIKTLETQFKSANDAVNQ
AKLDVTAKKTEITNTENDLKKQSAEIDMDKSSSELSEEKSRLTTETAEYQKKLESAQSAL
QQSKLDLSTVQTQLKDTEVQVKKQTSDIKSLQKQLNDSLSADDAKTHDAEVLNGWISEIN
EDKLSRLHVSISQYSQEYERLNSEIKKLTAELSDKQVPNIDELAKIQKDWNQKKEVIIQQ
VSFATKTLEDSRNSLKNVQKIMDDQGDFAKKLGEITSLYNIVTGKDGNDRKLKLETYVVQ
NYLQRVLNYANDHFINLLSNNRYSFELADEGSDKRTDHGLDINVFDNETGDSRSSNTLSG
GETFIAALSIALSLSEVVQSSSNGVQIDALFVDEGFGSLDHETLEKAMTALETIGENRMV
GVISHIESMKNSIGQQVYIKKLGDGRSTVEMINK
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccagtctatttggaaatgaaatattttggtccccacgaggactctataatcgat
tttcgtgcacttgaagaagcaccaattttcttaattggaggcgacactggtgccggtaaa
tcaactattttcgatgcaatgacctatgctctatttggcagtacaactggcgaccgtgat
gcaaaagagttacgcagtcagttcgcccctgatgatgaagcaaccgaagttgtattctac
ttcgaacaaggcaatcagctctatgaaatgactagaactcctgaacaataccttaccaag
aagcgtggttcaggactaggtaaaaaagttgctacggtaaagcttgcaattgttaaagaa
gttggcggagttgaagtccaaagtgttgcttcaaaaccggttgatgttggaaatgaaatt
gcatccatattgaatttaactgctgatcaatttaagaagatcatcctattacctcaaaat
gatttttcagaatttttgaaatctaaaacgaatgataaagaagtcattttgaagaaaatc
tttggcacacaaatgttcactgacttcacgactgagttaaagggcaaatacgacgaagct
agaaaacaaagtgaaggatttgagacacgacttcaatttgagctagagtcaaacatttgg
actgatgaagaaaaagaacagttgtctgcagaagcaaatagtcaaaaagtagaattatta
aataaatatgtacaaacacgttcgaactcattatcagatttaaagaagtcaaaagtatct
atcgataagtctgttgaaaaagctgatatggactatcaagtggcaaaagacttacaaaag
aaatttgctgatttagaaaaatacaagttagaattcaaaactaaaattactgacaaggct
gaacaacataagtctgaacaagtacatctttctgagcttcaatgggctaacccactgaaa
gatatagttagagatttggccacaaaaacatctgaccatcagcaaagcttgaagacacag
gtagaacagtccaatgctgaaaatctttctgaagaagcatatcaaaaagccaaggttctg
tcggacacattatctggacaatcagatgatattgaaaagaagaaaagccaaattactcaa
ctgactgcattgattcctagggttgagtcgattgaacagcttcgtcaaaagttagaagtt
gcaaaaccaaaacttgctgtactgcagaaacagttggatgaacagtctgaagctgccaaa
ctaatttcagacaaaatcactttgaaaaacaagcaattagtcccaaccgcagatttacaa
aaaacacgtaactctttgaccaaggaaaaagaaacattcgttgagacgttgacgccactt
ctaaatcttgttaccaacttagatagtgatatccgtcaagaaaacgttaatcttgggcaa
ctgaaatctgaacaagttgccaaacaatctgcgttggatgtggcaaagaaaaattacgat
aagcaaattagtcggcgtcaaggtttaatgattgcccaactacaaaaagagttagtggac
ggagaaccttgtgtagtttgcggttcaactgaccattcaaacatggtccatactgttgat
gcgaatgaaactgaattaaaagccgcaatggaacaagttgaccaatctcaaaatacattt
gcagccgctgaaaaaagtttgtccactgtaaaaggcaatgtcgttaaatcagaagcagaa
ttaaaatccaaaacagtttcacttgacaaagcaaaatcagatttatcggtaacttataaa
cagttaactgaaaaatccgacttgaatttctcagataaattttcacttgaacaagttaaa
cattctttcgatacaaagatttctgacgttgatagagaattaaccaccgcaaataatttg
tcgaatgaaattaaaactcttgagactcaatttaaatctgcaaatgatgctgtcaatcaa
gctaaacttgatgttactgctaaaaaaactgaaataactaacacggaaaatgacttgaag
aaacaatctgcagaaatagatatggacaaatctagttcagaattatcagaagaaaagtca
agattaactactgaaacagctgaataccagaagaagttggaatctgcacagtccgctttg
caacaaagtaagctggacttatctactgtccaaactcaattgaaggatactgaagttcaa
gttaaaaagcagacttcagatataaagtctcttcagaaacagttgaatgattccctctcc
gcggacgatgccaagactcatgatgctgaggttctgaatggttggatatccgagattaat
gaggataaactatctagacttcacgtttcaatttctcaatactcacaagaatatgagcgg
ttgaactcagaaataaagaaattgactgctgagttatctgataaacaagtacccaacatt
gatgagcttgctaaaatccagaaagattggaatcaaaagaaggaagtcatcatccaacaa
gtttcattcgcaacaaagactttggaagactcccggaacagtttgaagaatgttcaaaaa
attatggatgatcaaggtgactttgctaaaaaacttggtgaaatcactagcttatacaat
atcgtcactggtaaagacggaaatgaccgtaagttgaaactagaaacttatgtcgttcaa
aattaccttcaacgtgttttgaattatgccaatgatcactttatcaatttgctttcaaat
aatcgatattcatttgaacttgcggatgaaggctcagataaacgcactgaccacggtctg
gacatcaacgtttttgataacgagactggcgactcaaggtcgtccaacacactatcaggt
ggtgaaacgttcattgccgccttatcaatagcattatcacttagtgaagtcgttcaatca
tcttcaaatggtgttcaaatagatgccttatttgtcgatgaaggattcggttcactcgat
catgaaacactcgaaaaagctatgactgcactcgagaccatcggtgaaaaccgcatggtt
ggtgtcatcagccacattgagtcaatgaagaattccatcggacaacaagtttatatcaag
aaacttggcgatggacgtagcaccgttgaaatgattaataaataa
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