KEGG   Pseudoleptotrichia goodfellowii: JCM16774_0150
Entry
JCM16774_0150     CDS       T06508                                 
Name
(GenBank) type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lgo  Pseudoleptotrichia goodfellowii
Brite
KEGG Orthology (KO) [BR:lgo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lgo02048]
    JCM16774_0150
Enzymes [BR:lgo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     JCM16774_0150
Prokaryotic defense system [BR:lgo02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   JCM16774_0150
SSDB
Motif
Pfam: T1R_D3-like EcoR124_C SWI2_SNF2 HSDR_N ResIII DEAD MGP3_C DUF4382
Other DBs
NCBI-ProteinID: BBM35243
UniProt: A0A510JAQ7
LinkDB
Position
160608..163634
AA seq 1008 aa
MSEEVAKYNISAIAEMTNGIILANYKKDDHIQEPGFQTETQLENDMIKNLVSQGYEKLEA
TSNEDLYKNLKVQIERLNKVTFTQEEWRRFLVEYLDAPNDGMTEKTRKIQENHIYDFIFD
DGHLKNIKIIDKENIHNNILQVVHQINQKGKHNNRYDVTVLVNGLPLVHIELKKRGVNIH
EAFNQIHRYSKESFNAENSLYKYVQIFVISNGTYTRYFANTTAQSKNNYEFTCEWADAKN
KVIRDLEDFTKTFFERRTILEVLTKYCVFDASNTLLIMRPYQIAATERILWKIKSSYESK
KAGKTEAGGFIWHTTGSGKTLTSFKTARLATELDYIDKVFFVVDRKDLDYQTMKEYQKFQ
PDSVNGSKDTKELKRSIEKQDNKIVVTTIQKLNEFVKKNPNHEIYGKHCVLIYDECHRSQ
FGDAQKNIRKAFKYYYQFGFTGTPIFPENSLGGDTTSGVFGAQLHSYVITDAIRDGKVLK
FKVDYNNISAKFKSAETETDEKELKKLERKMLLHPDRISEITRHILRVFDVKTHRNELYS
VKQRQLSGFNAMFAVQSVEAAKLYYEEFQKQQENLSEEKRLKVATIYSFSANEEQTAIGE
IFEENFEPNALDSTAKEFLEKVINDYNGYFKTNFSTNGNEFQNYYKDLSKKVKNKEIDLL
IVVGMFLTGFDAPTLNTLFVDKNLRYHGLIQAFSRTNRILNKVKTFGNIVCFRNLEKATQ
DAIKTFGDENSVNIILEKSYEEYINGFKDEETGKTVKGYTDICKEIIEKFPEPTEIVLEA
DKKEFVQLFGELLKSQNILRNFDEFENFESGISDRQMQDMKSVYVDIREEILNSKSQENS
SNSSQIDFSDVEFQIDLLKTDEINLDYILTLILEKSKESEDIESLKSEIRRVIRSSLGTR
AKEELIIEFINKTKLSELKNNSDILESFYKYAKKEREAKIDELVNEEKLKDDSRRFIKKS
IDKGCVEYAGSELDSILPPTSRRQGAREAKKLSVLEKIRKIVEVFVGV
NT seq 3027 nt   +upstreamnt  +downstreamnt
atgtcggaagaagtagcaaagtataatatatcagcaattgctgagatgacaaacggaatt
attttagctaattataaaaaggatgatcatatacaggaaccgggttttcaaactgaaacg
cagttagaaaatgatatgataaaaaatcttgtatcgcagggttacgaaaaacttgaagca
acttcaaatgaggatttatacaaaaatttgaaagttcaaatagaaagattgaataaagta
acatttacacaggaagagtggagacgttttttagttgaatatttagatgctcccaatgat
ggtatgactgaaaaaacacgtaaaattcaggaaaatcatatttatgattttatatttgat
gacgggcatttgaaaaatattaaaattatagataaagaaaatatccataataatattttg
caggtcgtacatcagataaatcagaaaggaaaacataataatcgttacgatgtaactgtt
cttgtgaacgggttgccccttgtgcatatagaattgaaaaagcggggagtaaatattcat
gaagctttcaatcaaattcacagatacagtaaggaaagttttaatgcggaaaattcacta
tacaaatatgtacagatatttgtgatttccaacggaacttataccagatattttgcgaat
acgacagctcaaagtaaaaataattatgaatttacttgcgaatgggcagatgccaaaaac
aaagtaattagagatttggaggactttacaaaaacattttttgaaagacgtacaattctt
gaagttttgacaaaatattgtgtatttgatgcgagcaatactttgcttataatgagacct
tatcaaatagcggcgactgaacgtattttgtggaagataaagtcgagctatgaaagtaaa
aaggcagggaaaacagaagcagggggatttatctggcatactacggggtcggggaagaca
cttacttcatttaaaacggcaaggctggcaaccgagcttgattatattgataaagtcttt
tttgtagttgacagaaaagatttggattatcagacaatgaaggagtatcaaaagtttcag
cctgacagtgtaaacggaagtaaagataccaaagaacttaaaagaagtatagaaaaacag
gataataaaatagtcgttactacaattcaaaagctaaatgaatttgtgaagaaaaatcct
aatcatgaaatatacggtaaacattgtgttcttatttatgacgagtgtcatcgttctcag
ttcggagatgctcaaaaaaatataagaaaagcgtttaaatattattatcagttcggattt
acaggtacaccgatatttccggaaaattcattaggcggagatactacttcgggagtattc
ggggcacaattacacagttatgttattacagatgctattcgtgacgggaaagtactgaaa
tttaaagttgattataataatatcagtgcgaagtttaaatctgcagagactgaaacagac
gaaaaagaactgaaaaaacttgaaagaaagatgctgcttcatcctgatagaatttccgag
attactagacatattttaagagtttttgatgttaagactcatcgtaatgaattatacagc
gtgaagcaacgtcaattaagtggctttaatgcaatgtttgcagttcaaagtgtagaagcg
gcgaaactttattatgaagaatttcaaaaacagcaggaaaatttgtctgaagaaaaaagg
ctgaaagtagctacaatatacagtttttctgctaatgaagaacagactgctattggagaa
atttttgaagaaaattttgaaccgaatgctttggattccactgcaaaagagtttttggaa
aaggtaataaatgattataacggatattttaaaacgaatttttcaactaacggaaatgaa
tttcagaattattataaagatttgtcaaaaaaagtaaaaaataaagaaattgatttatta
atagtagtcggaatgtttttaacaggatttgatgctccaactttaaacacgttatttgtt
gataaaaatctgagatatcacggattaattcaggctttttcaagaacaaaccgtattttg
aataaagtcaaaactttcggaaatattgtatgtttcagaaatttggaaaaagcaacacag
gacgctataaagacgtttggagatgaaaacagtgtaaatattattttagagaaaagttat
gaggaatatattaacggatttaaagatgaggaaacgggaaaaacagtcaaaggatatact
gatatatgtaaagaaattattgaaaaattccctgagcctacagaaattgtccttgaagct
gataaaaaagaatttgttcaattgttcggagaacttttaaaatctcaaaatatacttaga
aattttgatgaatttgagaactttgaaagtggaatatccgacagacaaatgcaggatatg
aaaagtgtctatgtcgatataagagaagaaatactaaattcaaaatcacaagaaaatagc
agtaacagttcacaaattgatttttccgatgttgagtttcagattgatttattgaaaacg
gatgagattaatttagattatattttgactttgatattggaaaaatctaaagaaagtgag
gatatagaatctttgaaatccgaaattcggagagttatccgttcgagccttgggacacgg
gctaaagaggagcttattatagagtttattaataaaacgaagttatccgaactgaaaaac
aatagcgatattcttgaatctttttataaatatgcgaaaaaagaaagagaagcaaaaatt
gatgaattagtgaatgaagaaaaattgaaagatgattccaggagatttattaaaaagtct
attgataaaggatgcgtggaatatgcaggatcagaactcgacagtatattaccaccgact
tcccgtaggcagggagctcgcgaggctaaaaaacttagtgttttagaaaaaattagaaag
attgttgaggtttttgtgggggtttag

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