Pseudoleptotrichia goodfellowii: JCM16774_1184
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Entry
JCM16774_1184 CDS
T06508
Name
(GenBank) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lgo
Pseudoleptotrichia goodfellowii
Brite
KEGG Orthology (KO) [BR:
lgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgo03016
]
JCM16774_1184
Enzymes [BR:
lgo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
JCM16774_1184
Transfer RNA biogenesis [BR:
lgo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JCM16774_1184
Prokaryotic type
JCM16774_1184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
KH_KhpA-B
KH_2
KH_NusA_2nd
KH_1
Motif
Other DBs
NCBI-ProteinID:
BBM36252
UniProt:
A0A510JAE1
LinkDB
All DBs
Position
1143115..1144011
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AA seq
298 aa
AA seq
DB search
MNEVDKLIRGFENTNYFGYLFFVEYDGKKFDSFDENPEGKSLKSEFRKLLEMNGLKIFKG
IQQAGRTDKDVSAKENILYINSKKYIENFHKEIDGLKIRKIVRTVPFLEFPQMVSKRFYI
YEYPQNLIENDEEKIKSNCEKLSGKKNFKKYTSKKGEKLKNHIREVFVRFENGKLYFEGD
GFLPQQVRIMSNFILNNKMKSLPGEYLTLEKVEMSEELKKLIFKEVDKNMLMNSKEFLSE
LGNISEKIENIEKNEYFYVFYVSKKNKSEIIGKNGKNIKKMRKFIGNIVIKEKNSDIM
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagttgataaattaataagaggctttgaaaatacaaattatttcggatatctg
ttttttgtggagtatgacggaaaaaaatttgattcttttgatgaaaatcctgaaggaaaa
agtctaaaatcagagtttagaaaattacttgagatgaacggtctaaagatattcaagggt
attcagcaggcgggaagaactgataaagatgtaagtgcaaaagaaaatattttatatata
aattctaaaaaatatatagaaaattttcataaagaaattgatggactgaaaataagaaaa
attgtcagaacagtgccttttctcgaatttcctcaaatggtaagcaaacgcttttatatt
tatgaatatcctcaaaatcttatagaaaatgatgaggagaaaattaaatcaaactgtgaa
aaattgtcaggaaaaaagaattttaaaaaatatacttcaaaaaaaggagaaaaactgaaa
aatcatattagagaagtttttgtcagatttgaaaacgggaagttatattttgaaggagac
ggatttttacctcaacaggtgagaataatgagtaattttattttaaataataaaatgaag
tctttgccgggagaatatttgactttggaaaaagttgaaatgtccgaagaactgaaaaaa
ctcatttttaaagaagttgataaaaatatgttgatgaatagtaaggaatttttgtcggaa
ttaggaaatatttcggagaaaatagagaatattgagaaaaatgaatatttttatgtgttt
tatgtgagtaaaaaaaataaaagtgaaataatcggaaaaaatgggaaaaatataaaaaaa
atgagaaaatttataggaaatattgttattaaagaaaaaaattcagatattatgtaa
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