Pseudoleptotrichia goodfellowii: JCM16774_1378
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Entry
JCM16774_1378 CDS
T06508
Name
(GenBank) family 5 extracellular solute-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
lgo
Pseudoleptotrichia goodfellowii
Pathway
lgo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lgo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JCM16774_1378
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lgo02000
]
JCM16774_1378
Transporters [BR:
lgo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JCM16774_1378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Herpes_glycop_H
Motif
Other DBs
NCBI-ProteinID:
BBM36446
UniProt:
A0A510JBH3
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All DBs
Position
complement(1353202..1355004)
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AA seq
600 aa
AA seq
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MKLKNAGSVLIMIIMCVLMTACGPGEKKSNGGNGDKKEFKFPTETSNDGKAVSGGTLKVA
MVKDSPIVGIFNYAMYKDGYDGDILDWFVGGYILDIDENFEVTDTGIATLAVDVPNKKVT
IKIKDNMKWSDGQPVVADDVIYAYEVLGNKDYTGIRYNDESTKIVGMEEYHAGKTPNISG
IKKVDDKTVEITFKQLGQGIYTATTNGLLRYALPKHYLQDVPIKDLEKSDKIRKNIVTVG
PYTISNSVQGESLELKANEHYFRGKPKIEKVIIQVVNSQTIGAAMKAGEYDIALNIPTDL
YKTYKDFDNLEVLGRQELYYSYMGFKMGHFDKAKGENVVDPDKKMSDLRLRQALAYGIST
EEMVNAFYEGLREKATSSVPPVFKKYYPKDFKGFEYNLEKAKKLLDEAGYKDVDGDGYRE
DKNGKPLEIKIAAMSGGDIAEPLAQYYIQQWKQIGIKGVLATGRLIEFNSFYDKVEADDP
EIDVYFAAWGVDTDPDPYGTAGRKAMFNYTRFASDENDKLMAEIASPKTLEDPNYKAEAL
IKWQEYYINQAVEVPLTYRYQLYPVNKRVKNFYVGYDAEKLGKMVHLVELTADAPIKAKN
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgaaaaatgcaggttcagtgctgattatgattattatgtgtgtgttgatgacg
gcttgcgggccgggagaaaagaaaagtaacggaggaaacggagataaaaaagaatttaag
tttccgacagaaacatctaatgacggtaaagccgtttcgggaggaacacttaaagttgcc
atggttaaagattcacctattgtaggaatatttaactatgcaatgtataaagacggatat
gacggagatattctggactggtttgtaggcggttatattttagacatcgatgaaaatttt
gaagttacagatacaggtattgcgacattggctgtggatgttccgaataaaaaagtaacg
ataaaaattaaagacaatatgaagtggtctgacggacagcctgtagttgcagatgatgtt
atatatgcttatgaagttcttggaaataaagattatacgggaataagatataatgatgaa
agtacaaaaatagtaggaatggaagaatatcatgcaggaaaaactccaaatatttcagga
ataaaaaaggttgatgacaaaactgtagaaattacctttaagcaattaggacagggaata
tacactgctacaacaaacggactgttaagatacgctttaccgaaacactatttacaggat
gtaccgataaaagatttggaaaaatccgataaaataagaaaaaatatagtaacagtagga
ccttatactatatcaaattctgtacagggagaaagtttggaactgaaagccaatgagcat
tatttcagaggaaaaccgaaaatagaaaaagtaattatacaggtagtaaactctcaaaca
ataggagccgctatgaaagccggagaatacgacattgctttaaatataccgacagatctg
tataaaacatataaagattttgataacttggaagtgctcggaagacaagaattgtattat
tcttatatgggatttaaaatgggacattttgataaagctaaaggagaaaatgttgtagat
cctgacaaaaaaatgagtgatttaagattaagacaggcgttagcatatggaataagtact
gaagaaatggtaaatgctttttatgaagggttgagagaaaaagctacttcttctgtgccg
cctgtatttaagaaatattatcctaaagatttcaaaggatttgaatacaatctggaaaaa
gctaaaaagcttttggatgaagcaggatacaaagatgtggacggtgacggatacagagaa
gataagaatggaaaacctcttgaaataaaaatagctgcaatgtcgggaggagatatagca
gaaccattagctcaatattatatccaacaatggaaacagatagggataaaaggggtactt
gcaacaggaagacttatagagtttaacagtttttatgataaagtggaagctgacgatcct
gaaatagatgtatatttcgctgcatggggagtagatacggatcctgatccatatggaacg
gcaggacgtaaagcaatgtttaactatacaagatttgcttctgacgaaaacgataaactt
atggctgaaattgcaagtccgaaaactttggaagatcctaattataaagccgaagcattg
ataaaatggcaggaatattacataaatcaagcagtagaggtgcctttgacttatagatat
cagttgtatccggtaaataaaagagtaaaaaacttttatgtgggatatgatgctgaaaaa
ttaggaaaaatggtacatttggtagaattgacagctgatgcacctataaaagcgaaaaac
taa
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