Pseudoleptotrichia goodfellowii: JCM16774_1418
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Entry
JCM16774_1418 CDS
T06508
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lgo
Pseudoleptotrichia goodfellowii
Pathway
lgo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JCM16774_1418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgo03400
]
JCM16774_1418
Enzymes [BR:
lgo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JCM16774_1418
DNA repair and recombination proteins [BR:
lgo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JCM16774_1418
Prokaryotic type
JCM16774_1418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_EML
WD40_Prp19
CFAP43_N
Motif
Other DBs
NCBI-ProteinID:
BBM36486
UniProt:
A0A510JBL3
LinkDB
All DBs
Position
complement(1398770..1400449)
Genome browser
AA seq
559 aa
AA seq
DB search
MNIILEDSIYHRSGIKDFGVDPVNERIIMTGEKLVFFKNGKIEKEISGKVKNCEIIKYIK
EKNQLFVSSTFFVSTGTGKVYKCDSSKKKIVEPVFDSEKLIEFINFTTGGKIIYIENDIL
YSYDSNSLELNQAEISEKESRQRGNYKLFTSGENVILKYRELHSQTNIINIFDSKLEKIF
EIKTENNHIYAKISDLEYIAGTATGEIEIWNILEKELYNSIKIADSRITYIEKNNGNYFI
GTGNGDLIITDWEFKILKTQSVFKNEIIKICYIEDQIFILSADNKIVTLKIIDEENDSKN
TPLREKFLEEYNIHSDYYDFFTLDRVIKIDNFIKEMDIKKINYTPSRENIFKVFSDSISS
RKVCLIGKDPYFQEGVATGLSFEVNKSSWDDPEINTSLKNIVKLIYKTYTGKSEDISKIR
EEIENKKFLILPPNKLIKSWKEQGVLLVSAALTTIVGKAGEHHKFWDPFTRDLLEYISAK
NPNIVYFLWGKDAEIFEKNILSGEIIKHNHPAISGNLSNEKDFMNGKSFEKTKNIINWTG
FEIKPEKVVEDTENTGRLF
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaatataattttagaagacagtatatatcatagaagcggaataaaagatttcggagta
gatcctgtaaatgaacggataatcatgacaggagaaaaacttgtatttttcaaaaatggt
aaaatagaaaaagaaataagcggaaaagttaagaattgtgaaataataaaatatattaaa
gagaagaatcagttatttgtttcaagtacattttttgtttctaccggaacgggaaaagtt
tataaatgcgacagttcaaagaaaaaaatagttgaacctgtttttgattcggaaaaatta
atagagtttataaattttacaacaggcggaaaaataatttatattgaaaatgatatattg
tattcttatgattcgaacagcttggaacttaatcaagctgaaatttctgagaaagaaagc
agacaaaggggaaattataaattatttacgagcggtgaaaatgttattttaaaatacaga
gagcttcacagccagacaaatataatcaacatttttgacagtaaacttgaaaaaatattt
gaaataaaaaccgaaaataatcatatatatgcaaaaatttccgacttggagtatattgcg
ggaactgcaacaggagaaatagaaatatggaatatactcgaaaaagagctgtataattcc
ataaaaatagctgattcgagaataacatatattgagaagaataacggaaattattttatc
ggtacgggaaacggtgatttgattataaccgattgggaatttaaaatattgaaaacacaa
agtgtttttaaaaatgaaattataaaaatatgttatattgaagatcagatttttatttta
agtgcagataataaaatagtaactttaaaaattatcgatgaagaaaatgacagtaaaaat
acaccgttaagagaaaagtttttggaagaatataatattcatagtgattattatgatttt
tttacgttggacagagttataaaaatagataattttataaaagaaatggatataaaaaag
ataaactatactccatcaagagaaaacatatttaaagtattttccgattcgatttcttcg
agaaaagtgtgtctgataggaaaagatccttattttcaggaaggagtagcaacaggactt
tcttttgaagtaaataaatcttcgtgggatgatcctgaaataaatacatcactgaaaaat
atagttaagttaatttacaaaacttacacgggaaaatctgaagatataagtaaaatcaga
gaagaaatcgaaaataaaaagtttttgatattgccgcccaacaaacttataaaatcatgg
aaagagcaaggagttcttcttgtcagtgccgctcttacaacgattgtcgggaaagcggga
gagcatcataaattctgggaccctttcacaagggatttgctcgaatatatttccgcaaaa
aatcccaatatagtgtatttcttatggggaaaagacgccgaaatatttgaaaaaaatata
ttgtcgggggaaattataaagcacaatcatcctgctatatcgggaaatctatccaatgaa
aaagattttatgaacggaaaatcttttgaaaaaacaaaaaatattataaactggacagga
tttgaaataaaacctgaaaaagtcgtagaagatactgaaaatacaggaagacttttttaa
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