Pseudoleptotrichia goodfellowii: JCM16774_1564
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Entry
JCM16774_1564 CDS
T06508
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lgo
Pseudoleptotrichia goodfellowii
Brite
KEGG Orthology (KO) [BR:
lgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgo03032
]
JCM16774_1564
03400 DNA repair and recombination proteins [BR:
lgo03400
]
JCM16774_1564
Enzymes [BR:
lgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JCM16774_1564
DNA replication proteins [BR:
lgo03032
]
Prokaryotic type
DNA Topoisomerases
JCM16774_1564
DNA repair and recombination proteins [BR:
lgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JCM16774_1564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BBM36620
UniProt:
A0A510JBC6
LinkDB
All DBs
Position
complement(1547453..1549990)
Genome browser
AA seq
845 aa
AA seq
DB search
MRENKYKKFEVRVLAKKLVIVESPSKAKTIEKILGKGYEVTASYGHVIDLPKTKIGIDVE
NNFEPKYQVIKGKGEVLKKLKEKSKKASTVYLASDQDREGEAIAWHISNYIKQPEKTKRI
EFNEITKTAVNNAIKNPRDINKNLVNAQQARRLLDRIVGYKISPLLWKTINKNASAGRVQ
SVALKLICDLEGEIKSFVPQKYWEVGALLENGINLNLVEILKEKVDKIFDEEVVKKLKKE
LKGKSLTLDSIEIKKKTQRPPLVFKTSTLQQLASSYLGYGATKTMRIAQQLYEGLSISGE
NRGLITYMRTDSTRISMDAINMAKDYITNHYGKEYVGYYVTKNSKSNVQDAHEGIRPSDI
NLDPEKIKDSLTNDQYKLYKLIWNRFLVSQFAAMKYEQMQINAVNGDYKFRGTINKVIFD
GYYKIFKEEDEIKTADFPELKEGDSYLIKKLNVEEGITKPPTRYSEATLVKKLESEGIGR
PSTYASIVETLKTREYVEIIEKRFHPTFLGYEVKNELEKNFEDIMNVKFTAIMEEDLDKI
EEGNVQWVELLKKFYDSLEIHLEQYEKEIEKLKDRRIESDVLSSDGSPMLLKTGRFGKYL
VSETNPEEKITIKGIAVEPEQIEAGKIFIKEEVEKLQANKKGIPTDFFTENDKRYMLKKG
RFGEYLESEDYENDEKRMSLPLPIKQKYKKGTLNEVNGILQINEEITAIINEDKKIIEEA
GVCEKCGRPFEIKMGRFGKFLACTGYPECKNIKAIPKAKSASAKKKTASKKTKPKKGTAG
KTAAKKVAGENTTVKKAASKKETVEKTSTKKAVAKTKKASSTKTTAKKSSTAKKTTSKKS
SSKDK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
ttgagagaaaataaatataagaaatttgaggtgagagttttggcaaaaaagcttgtaata
gtggagtctccgtccaaagcaaaaacaattgagaaaatattgggaaaaggttatgaagta
accgcttcttacggacatgttattgacttgcccaaaacaaaaataggaatagatgtggaa
aataattttgagcctaaatatcaggtcataaaaggaaaaggcgaagtactgaaaaaatta
aaagaaaaatcaaaaaaggctagtacggtttatctggcatcggatcaggatcgtgaagga
gaggctattgcatggcatatttccaattatataaaacagcctgaaaaaaccaaaagaata
gaatttaatgaaatcacaaaaactgcagtgaataatgcaataaaaaatcccagagatata
aataaaaaccttgtaaatgcacaacaggcaagaaggcttttggacagaatagtgggttat
aaaatcagtcctttgctatggaaaacaataaataaaaatgccagtgcaggtcgtgtgcag
tctgtggcgttaaaactgatttgcgatctggaaggtgaaattaaaagttttgttccacaa
aaatactgggaagtaggagcattacttgaaaacggaataaatcttaatcttgtagaaatt
cttaaagaaaaagtagataaaatctttgatgaagaagttgtaaaaaaacttaaaaaagaa
ctgaaaggtaaatctttgacattggacagcatagaaatcaagaaaaaaactcaaagaccg
cctcttgtttttaagacaagcacattgcagcaactggcttcatcttatttaggttacggg
gctacaaaaacgatgagaatagctcagcagctatatgaagggctttccatcagtggagaa
aatcgtgggcttataacatacatgagaactgattccacaagaatttccatggatgcaata
aacatggcaaaagactacattacaaatcattatgggaaagaatatgtcggatactatgtt
actaaaaattccaagtccaatgttcaggatgctcacgaaggtataagaccttcggatata
aatcttgatcctgaaaaaataaaggactctctgacgaacgatcagtataaattatataaa
cttatatggaacagatttctcgtttcacagtttgctgcaatgaaatatgaacagatgcag
ataaatgcagtgaatggagattacaaatttagaggaactataaataaagtaatatttgat
ggatattataaaatattcaaagaagaagatgaaataaaaacagccgactttcctgaatta
aaagagggagacagttatctgataaaaaaacttaatgttgaagaaggtattacaaagcct
cctacaagatattcggaagcgacacttgtgaaaaaactcgaatccgaagggataggaaga
ccgtcgacttatgcttcaatagtggaaactcttaaaacaagggaatatgtggaaattata
gaaaaaaggtttcatcctacctttttaggatatgaagtgaaaaatgagctcgaaaaaaac
tttgaagatataatgaatgtaaaatttactgcaattatggaagaggaccttgataaaata
gaagagggaaatgttcagtgggtggaattattaaaaaaattctatgattctctggaaatt
catttggaacagtatgagaaagaaatagaaaaactaaaagacagaagaatagaatcggat
gttctttcttcagacggaagtcctatgcttttaaaaacgggaagattcggaaaatacctt
gtttccgagacaaatcctgaagaaaaaataacaataaaaggaatagccgtcgagcctgaa
caaattgaagcgggaaaaatctttataaaagaagaagtggaaaaacttcaggcaaataaa
aaaggaataccgacagacttttttacagaaaatgacaaaagatacatgttgaaaaaagga
cggtttggagaatatctggaaagtgaagattatgaaaatgatgaaaaaagaatgtctttg
cctttacctataaagcagaaatacaaaaaaggaacacttaacgaagtaaacgggatttta
cagataaatgaagaaataacggcaattataaatgaagataaaaaaataatagaagaagcg
ggagtatgcgaaaaatgcggacgtccttttgaaataaaaatgggaaggttcggaaagttt
ttagcatgtacaggctatcctgaatgtaaaaatataaaagcgattcctaaagcaaaatcg
gcttctgcgaagaaaaaaactgcttccaaaaagacgaagccaaagaaaggaactgcaggg
aaaacggctgctaaaaaagtagcgggtgaaaatacaacagttaaaaaagctgcaagtaaa
aaagaaacagttgaaaaaacttcaactaaaaaagctgtagcaaaaacaaaaaaagcaagc
agcactaaaacaacggctaaaaaaagttcaactgctaagaaaacaacttcaaaaaaatca
tcttccaaagataaataa
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